Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00888
• Subject: XM_017021262.1
• Aligned Length: 1460
• Identities: 879
• Gaps: 550

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAGGATGTGGGAGGTCCCAGGGGCCCCCAGGCAGCTCAGGCTGGCCTGCCCTCTAGTGGGGAGCAGAGCAG  74

Query    1  ---------------------------------ATGCAG--------ACCTTTCT-------GAAAGGGAA---  23
                                             .||.||        .||.||||       ||.|||.||   
Sbjct   75  ACAGATCTCCCAGCCCAGTGGGGGCCAGCTGTGGTGGAGCCCGCCTCCCCATTCTATTCTTGGAGAGGAAAAGC  148

Query   24  ------------GAGAGTTGGC---TACTGG----------------------CTGAG----------------  44
                        |||.|..|||   .|||||                      |||||                
Sbjct  149  ACAGAAATACAGGAGTGAAGGCACAGACTGGGCAGAGGGGCCGGAGTCGCCCTCTGAGGAGGCCTGTAGGGCCC  222

Query   45  CGAGAAG-------------AAAATCAAGA--------AGC-----TGAATTT-------CCAGGC-CTTCGCC  84
            |.|||||             |.||||||||        |||     ||.||||       ||||.| |||.|||
Sbjct  223  CCAGAAGAGTTTTCTGGGTCAGAATCAAGAGACTCAGGAGCCTTTTTGCATTTTGTGAGCCCAGTCACTTTGCC  296

Query   85  GAGCTGTGCAGGAAGCGAGGGATGGAGGTTGTGCAGCTGAACCTTAGCCGGCCGATCGAGGAGCAGGGCCCCCT  158
              .|||..|||                        |||||||||||||||||||||||||||||||||||||||
Sbjct  297  --TCTGGTCAG------------------------GCTGAACCTTAGCCGGCCGATCGAGGAGCAGGGCCCCCT  344

Query  159  GGACGTCATCATCCACAAGCTGACTGACGTCATCCTTGAAGCCGACCAGAATGATAGCCAGTCCCTGGAGCTGG  232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  345  GGACGTCATCATCCACAAGCTGACTGACGTCATCCTTGAAGCCGACCAGAATGATAGCCAGTCCCTGGAGCTGG  418

Query  233  TGCACAGGTTCCAGGAGTACATCGATGCCCACCCTGAGACCATCGTCCTGGACCCGCTCCCTGCCATCAGAACC  306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  419  TGCACAGGTTCCAGGAGTACATCGATGCCCACCCTGAGACCATCGTCCTGGACCCGCTCCCTGCCATCAGAACC  492

Query  307  CTGCTTGACCGCTCCAAGTCCTATGAGCTCATCCGGAAGATTGAGGCCTACATGGAAGACGACAGGATCTGCTC  380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  493  CTGCTTGACCGCTCCAAGTCCTATGAGCTCATCCGGAAGATTGAGGCCTACATGGAAGACGACAGGATCTGCTC  566

Query  381  GCCACCCTTCATGGAGCTCACGAGCCTGTGCGGGGATGACACCATGCGGCTGCTGGAGAAGAACGGCTTGACTT  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  567  GCCACCCTTCATGGAGCTCACGAGCCTGTGCGGGGATGACACCATGCGGCTGCTGGAGAAGAACGGCTTGACTT  640

Query  455  TCCCATTCATTTGCAAAACCAGAGTGGCTCATGGCACCAACTCTCACGAGATGGCTATCGTGTTCAACCAGGAG  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  641  TCCCATTCATTTGCAAAACCAGAGTGGCTCATGGCACCAACTCTCACGAGATGGCTATCGTGTTCAACCAGGAG  714

Query  529  GGCCTGAACGCCATCCAGCCACCCTGCGTGGTCCAGAATTTCATCAACCACAACGCCGTCCTGTACAAGGTGTT  602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  715  GGCCTGAACGCCATCCAGCCACCCTGCGTGGTCCAGAATTTCATCAACCACAACGCCGTCCTGTACAAGGTGTT  788

Query  603  CGTGGTTGGCGAGTCCTACACCGTGGTCCAGAGGCCCTCACTCAAGAACTTCTCCGCAGGCACATCAGACCGTG  676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  789  CGTGGTTGGCGAGTCCTACACCGTGGTCCAGAGGCCCTCACTCAAGAACTTCTCCGCAGGCACATCAGACCGTG  862

Query  677  AGTCCATCTTCTTCAACAGCCACAACGTGTCAAAGCCGGAGTCGTCATCGGTCCTGACGGAGCTGGACAAGATC  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  863  AGTCCATCTTCTTCAACAGCCACAACGTGTCAAAGCCGGAGTCGTCATCGGTCCTGACGGAGCTGGACAAGATC  936

Query  751  GAGGGCGTGTTCGAGCGGCCGAGCGACGAGGTCATCCGGGAGCTCTCCCGGGCCCTGCGGCAGGCACTGGGCGT  824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  937  GAGGGCGTGTTCGAGCGGCCGAGCGACGAGGTCATCCGGGAGCTCTCCCGGGCCCTGCGGCAGGCACTGGGCGT  1010

Query  825  GTCACTCTTCGGCATCGACATCATCATCAACAACCAGACAGGGCAGCACGCCGTCATTGACATCAATGCCTTCC  898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011  GTCACTCTTCGGCATCGACATCATCATCAACAACCAGACAGGGCAGCACGCCGTCATTGACATCAATGCCTTCC  1084

Query  899  CAGGGGACTGCCA---------AGTGTGCTTTATAGAAGGCTGGAAGACCGAC---------------------  942
            ||||   ||.|.|         .|.||.|||.|.|||...|..|||   |.||                     
Sbjct 1085  CAGG---CTACGAGGGCGTGAGCGAGTTCTTCACAGACCTCCTGAA---CCACATCGCCACTGTCCTGCAGGGC  1152

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1153  CAGAGCACAGCCATGGCAGCCACAGGGGACGTGGCCCTGCTGAGGCACAGCAAGCTTCTGGCCGAGCCGGCGGG  1226

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1227  CGGCCTGGTGGGCGAGCGGACATGCAGCGCCAGCCCCGGCTGCTGCGGCAGCATGATGGGCCAGGACGCGCCCT  1300

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1301  GGAAGGCTGAGGCCGACGCGGGCGGCACCGCCAAGCTGCCGCACCAGAGACTCGGCTGCAACGCCGGCGTGTCG  1374

Query  943  ------------------------------------------------------  942
                                                                  
Sbjct 1375  CCCAGCTTCCAGCAGCATTGTGTGGCCTCCCTGGCCACCAAGGCCTCCTCCCAG  1428