Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00998
• Subject: XM_006720529.3
• Aligned Length: 1438
• Identities: 728
• Gaps: 701

Alignment

Query    1  ATGGCGCAAAGGTACGATGAGCTGCCCCATTACGGCGGGATGGACGGAGTAGGGGTTCCCGCTTCCATGTACGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGACCCTCACGCGCCGCGGCCGATCCCCCCGGTTCACCACCTGAACCACGGGCCGCCGCTCCACGCCACACAGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACTACGGCGCGCACGCCCCGCACCCCAATGTCATGCCGGCCAGTATGGGATCCGCTGTCAACGACGCCTTGAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGGGACAAGGACGCGATCTATGGGCACCCGTTGTTTCCTCTGTTAGCTCTGGTCTTTGAGAAGTGCGAGCTGGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GACCTGCACTCCCCGGGAACCTGGAGTGGCTGGCGGAGACGTCTGCTCCTCCGACTCCTTCAACGAGGACATCG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CGGTCTTCGCCAAGCAGGTTCGCGCCGAAAAGCCACTTTTTTCCTCAAATCCAGAGCTGGACAATTTGATGATA  444
                                                                                ||||||
Sbjct    1  --------------------------------------------------------------------ATGATA  6

Query  445  CAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAACTGTGCGATAACTTCTGCCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    7  CAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAACTGTGCGATAACTTCTGCCA  80

Query  519  CCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAAAGAGACGGCAGCTCCAAGT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   81  CCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAAAGAGACGGCAGCTCCAAGT  154

Query  593  CAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTCTTCTTGGCGAGACCACGAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  155  CAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTCTTCTTGGCGAGACCACGAT  228

Query  667  GATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATGCTTCCCAGAGCGGAGACAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  229  GATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATGCTTCCCAGAGCGGAGACAA  302

Query  741  CAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGTGACGATGATGATCCGGATA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  303  CAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGTGACGATGATGATCCGGATA  376

Query  815  AGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATATCATGAGAGCATGGCTCTTC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  377  AGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATATCATGAGAGCATGGCTCTTC  450

Query  889  CAGCATCTCACACATCCGTACCCTTCCGAAGAGCAGAAGAAACAGTTAGCGCAAGACACAGGACTTACAATTCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  451  CAGCATCTCACACATCCGTACCCTTCCGAAGAGCAGAAGAAACAGTTAGCGCAAGACACAGGACTTACAATTCT  524

Query  963  CCAAGTAAACAACTGGTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATTGACCAGTCAAATCGAG---  1033
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct  525  CCAAGTAAACAACTGGTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATTGACCAGTCAAATCGAGCAG  598

Query 1034  ------------------CAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTG  1089
                              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  599  GTTTTCTTCTTGATCCTTCAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTG  672

Query 1090  TTGGATGGTCAGCAACACATGGGGATCCGGCCTGCAGGTTTGCAGAGC-ATGCCAGGGGACTACGTTTCTCAGG  1162
            |||||||||||||||||||||||||||||||||||||       ||.| |||  ||.|||              
Sbjct  673  TTGGATGGTCAGCAACACATGGGGATCCGGCCTGCAG-------GACCTATG--AGTGGA--------------  723

Query 1163  GTGGTCCTATGGGAATGAGTATGGCACA------GCCAAGTTACACTCCTCCCCAGATGACCCCACACCCTACT  1230
                    |||||.||||.||||| .||      |.||| |..||||       |.|||               
Sbjct  724  --------ATGGGCATGAATATGG-GCATGGATGGGCAA-TGGCACT-------ACATG---------------  765

Query 1231  CAATTAAGACATGGACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGATGATGCACGG  1304
                                                                                      
Sbjct  766  --------------------------------------------------------------------------  765

Query 1305  AGGACCCCCTACCCACCCTGGAATGACTATGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAGATCCCAATG  1378
                                                                                      
Sbjct  766  --------------------------------------------------------------------------  765

Query 1379  TTGGCGGACAGGTTATGGACATTCATGCCCAA  1410
                                            
Sbjct  766  --------------------------------  765