Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00998
- Subject:
- XR_002957641.1
- Aligned Length:
- 3045
- Identities:
- 1330
- Gaps:
- 1713
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCGGACCCAGATGACTGCCTCCTCACTTCCTCCCTCCCGATTCCGCCGCGGCCCCCAAAGACTCTCGGGGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCTTGTCCGCACCGCTTGGAGGGAGTGTGCTCTGAGTTAAGCTGGTCTCTTCTGGTCCTGGAAAAAAATGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATTGACAAGGTTGCTGGATCTGCGCAGAAAAGAAAGTGCCACTTAATAAAAAATTTAGCCCGGCAGTGGTACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCTGCAGAGCTTGCTGCCCTTGGACGTTAGCAGGAAGCCTTCGGGGTGCTGTAATCGGCGGGCAGAGGAGAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGCCGCGGAATTAAAAGGAACAAAAGCTAGAGCGCCATGCCAAACGTCCCCGGCAAGACCCAGTTAGGCAGG 370
Query 1 -----------ATGGCGCAAAGG--------TACGATGAGCTGCCCCATTACGGCGGGATGGACGGAGTAGGGG 55
|||| |.|||.| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCCGGGAGTGATGG-GAAAATGAACTAGAATACGATGAGCTGCCCCATTACGGCGGGATGGACGGAGTAGGGG 443
Query 56 TTCCCGCTTCCATGTACGGAGACCCTCACGCGCCGCGGCCGATCCCCCCGGTTCACCACCTGAACCACGGGCCG 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 TTCCCGCTTCCATGTACGGAGACCCTCACGCGCCGCGGCCGATCCCCCCGGTTCACCACCTGAACCACGGGCCG 517
Query 130 CCGCTCCACGCCACACAGCACTACGGCGCGCACGCCCCGCACCCCAATGTCATGCCGGCCAGTATGGGATCCGC 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 CCGCTCCACGCCACACAGCACTACGGCGCGCACGCCCCGCACCCCAATGTCATGCCGGCCAGTATGGGATCCGC 591
Query 204 TGTCAACGACGCCTTGAAGCGGGACAAGGACGCGATCTATGGGCACCCGTTGTTTCCTCTGTTAGCTCTGGTCT 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 TGTCAACGACGCCTTGAAGCGGGACAAGGACGCGATCTATGGGCACCCGTTGTTTCCTCTGTTAGCTCTGGTCT 665
Query 278 TTGAGAAGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCTGGAGTGGCTGGCGGAGACGTCTGCTCCTCCGAC 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 TTGAGAAGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCTGGAGTGGCTGGCGGAGACGTCTGCTCCTCCGAC 739
Query 352 TCCTTCAACGAGGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAAGCCACTTTTTTCCTCAAATCCAGA 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 TCCTTCAACGAGGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAAGCCACTTTTTTCCTCAAATCCAGA 813
Query 426 GCTGGACAATTTGATGATACAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAAC 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 GCTGGACAATTTGATGATACAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAAC 887
Query 500 TGTGCGATAACTTCTGCCACCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAA 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 TGTGCGATAACTTCTGCCACCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAA 961
Query 574 AGAGACGGCAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTC 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 AGAGACGGCAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTC 1035
Query 648 TTCTTGGCGAGACCACGATGATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATG 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TTCTTGGCGAGACCACGATGATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATG 1109
Query 722 CTTCCCAGAGCGGAGACAACAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGT 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 CTTCCCAGAGCGGAGACAACAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGT 1183
Query 796 GACGATGATGATCCGGATAAGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATAT 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 GACGATGATGATCCGGATAAGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATAT 1257
Query 870 CATGAGAGCATGGCTCTTCCAGCATCTCACACATCCGTACCCTTCCGAAGAGCAGAAGAAACAGTTAGCGCAAG 943
|||||||||||||||||||||||||||||||
Sbjct 1258 CATGAGAGCATGGCTCTTCCAGCATCTCACA------------------------------------------- 1288
Query 944 ACACAGGACTTACAATTCTCCAAGTAAACAACTGGTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATT 1017
||||||||||||||||||||||||||||||||||||||||
Sbjct 1289 ----------------------------------GTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATT 1328
Query 1018 GACCAGTCAAATCGAGCAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTT 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 GACCAGTCAAATCGAGCAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTT 1402
Query 1092 GGATGGTCAGCAACACATGGGGATCCGGCCTGCAG--------------------------------------- 1126
|||||||||||||||||||||||||||||||||||
Sbjct 1403 GGATGGTCAGCAACACATGGGGATCCGGCCTGCAGGACCTATGAGTGGAATGGGCATGAATATGGGCATGGATG 1476
Query 1127 ---------------------------------------------------------GTTTGCAGAGCATGCCA 1143
|||||||||||||||||
Sbjct 1477 GGCAATGGCACTACATGTAACCTTCATCATGTAAAGCAATCGCAAAGCAAGGGGGAAGTTTGCAGAGCATGCCA 1550
Query 1144 GGGGACTACGTTTCTCAGGGTGGTCCTATGGGAATGAGTATGGCACAGCCAAGTTACACTCCTCCCCAGATGAC 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 GGGGACTACGTTTCTCAGGGTGGTCCTATGGGAATGAGTATGGCACAGCCAAGTTACACTCCTCCCCAGATGAC 1624
Query 1218 CCCACACCCTACTCAATTAAGACATGGACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCA 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1625 CCCACACCCTACTCAATTAAGACATGGACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCA 1698
Query 1292 TGATGATGCACGGAGGACCCCCTACCCACCCTGGAATGACTATGTCAGCACAGAGCCCCACAATGTTAAATTCT 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1699 TGATGATGCACGGAGGACCCCCTACCCACCCTGGAATGACTATGTCAGCACAGAGCCCCACAATGTTAAATTCT 1772
Query 1366 GTAGATCCCAATGTTGGCGGACAGGTTATGGACATTCATGCCCAA----------------------------- 1410
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1773 GTAGATCCCAATGTTGGCGGACAGGTTATGGACATTCATGCCCAATAGTATAAGGGAACTCAAGGGAAAAGGAA 1846
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1847 ACACACGCAAAAACTATTTTAAGACTTTCTGAACTTTGACCAGATGTTGACACTTAATATGAAATTCCAGACAG 1920
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1921 CTGTGATTATTTTTTACTTTTGTCATTTTTCATCAAGCAACAGAGGACCAATGCAACAAGAACACAAATGTGAA 1994
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1995 ATCATGGGCTGACTGAGACAATTCTGTCCATGTAAAGATCCTCTGGAAAAAGACTCCGAGAGTTATAACTACTG 2068
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2069 TAGTATAAATATAGGAACTAAGTTAAACTTGTACATTTCTGTTGATCACGCCGTTATGTTGCCTCAAATAGTTT 2142
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2143 TAGAAGAGAAAAAAAAATATATCCTTGTTTTCCACACTATGTGTGTTGTTCCCAAAAGAATGACTGTTTTGGTT 2216
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2217 CATCAGTGAATTCACCATCCAGGAGAGACTGTGGTATATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCA 2290
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2291 CACTGGAGATCATGATGAACTTTTGGCTGAACCTCATCACTCGAACTCCAGCTTCAAGAATGTGTTTTCATGCC 2364
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2365 CGGCCTTTGTTCCTCCATAAATGTGTCCTTTAGTTTCAAACAGATCTTTATAGTTCGTGCTTCATAAGCCAATT 2438
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2439 CTTATTATTATTTTTGGGGGACTCTTCTTCAAAGAGCTTGCCAATGAAGATTTAAAGACAGAGCAGGAGCTTCT 2512
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2513 TCCAGGAGTTCTGAGCCTTGGTTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACACAAAAAAAAGT 2586
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2587 TATTAATGGTCATTGAACCATAACTAGGACTTTATCAGAAACTCAAAGCTTGGGGGATAAAAAGGAGCAAGAGA 2660
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2661 ATACTGTAACAAACTTCGTACAGAGTTCGGTCTATTAATTGTTTCATGTTAGATATTCTATGTGTTTACCTCAA 2734
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2735 TTGAAAAAAAAAAGAATGTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGAATTCTTC 2808
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2809 TTTTCTCAGCACGTGTTCCTCACTAGAAGAAAATGCTGTTACCTTTAAGCTTTGTCAAATTTACATTAAAATAC 2882
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2883 TTGTATGAGGACTGTGACGTTATGTTAAAAAAAAAAAGGTGTTAAGTCACAAAAAGCGGTAATAAATATTTCAT 2956
Query 1411 ----------- 1410
Sbjct 2957 TTTTGATTTTT 2967
