Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01287
- Subject:
- XM_017320886.2
- Aligned Length:
- 1408
- Identities:
- 976
- Gaps:
- 143
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACCTTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA 74
Query 1 ----------------------------------------ATGAGCAGAAGCAAGCGT-GACAACAATTTTTAT 33
|||||||.||||||| || ||||||.|.||.||.
Sbjct 75 TAAACACGTGGATGTGTCATCTATTGCCAAACATTACAACATGAGCAAAAGCAAG-GTGGACAACCAGTTCTAC 147
Query 34 AGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCAGGAGC 107
|||||.||..|.||.||.||.||.|||||.||.||.||.||.||.|||||..|.||.||.||.|||||.||.||
Sbjct 148 AGTGTGGAAGTGGGGGACTCAACCTTCACCGTTCTTAAGCGCTACCAGAACCTGAAGCCAATTGGCTCTGGGGC 221
Query 108 TCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCGACCAT 181
|||.||||||||.||.||.||.||.||.||..|.|||||.||||||||.||.||.||||||||.|||.||||.|
Sbjct 222 TCAGGGAATAGTCTGTGCTGCGTACGACGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCT 295
Query 182 TTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAAATATA 255
|.|||||.||.|||||.||||||.||||.|||.|.|||||.||.||.|||||.|||||.||.||.|||||.||.
Sbjct 296 TCCAGAACCAAACTCACGCCAAGAGGGCTTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATT 369
Query 256 ATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCT 329
|||.||.|.||.||||||||.|||||.||||||.|.||.||.||.||.||||||||.|||.||||.|||||.||
Sbjct 370 ATTAGCTTATTAAATGTTTTTACACCCCAGAAAACACTGGAGGAGTTCCAAGATGTCTACTTAGTGATGGAACT 443
Query 330 CATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTATCAGA 403
.|||||.||.||.||.||.||.|||||||||||||||||.||.||.||..|.|||||.|||.|.||.||.||||
Sbjct 444 GATGGACGCCAACCTGTGTCAGGTGATTCAGATGGAGCTGGACCACGAGCGGATGTCTTACTTGCTGTACCAGA 517
Query 404 TGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAGTAGTA 477
||||||||||.|||||||||||.||.||.|||||.||.||.||..||||||||||.||||||||.||.|||||.
Sbjct 518 TGCTGTGTGGCATCAAGCACCTCCACTCCGCTGGGATCATCCACAGGGACTTAAAACCCAGTAACATTGTAGTC 591
Query 478 AAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATGACGCC 551
||.|||||||||||..||||.||.||.||||||||.|||||||||||.||.||.||.||.||.||||||||.||
Sbjct 592 AAGTCTGATTGCACACTGAAAATCCTCGACTTCGGACTGGCCAGGACAGCGGGTACAAGCTTCATGATGACTCC 665
Query 552 TTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTTGACATTT 625
.|||||.|||||.||.||.||||||||.||.|||||||||||.|||||||||||||||||.|||||||||.|.|
Sbjct 666 GTATGTGGTGACGCGATATTACAGAGCCCCTGAGGTCATCCTGGGCATGGGCTACAAGGAGAACGTTGACCTGT 739
Query 626 GGTCAGTTGGGTGCATCATGGGAGAAATGATCAAAGGTGGTGTTTTGTTCCCAGGTACAGATCATATTGATCAG 699
|||||||.|||||||||||||||||||||.|.|||||....||..|||||||.||.||.|||||||||||.|||
Sbjct 740 GGTCAGTAGGGTGCATCATGGGAGAAATGGTAAAAGGCACAGTGCTGTTCCCTGGCACTGATCATATTGACCAG 813
Query 700 TGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTAAGGAC 773
|||||.|||||.||.||.|||||.|||||.||.|||||.||.||||||||||||.||||.||.|||||.||.|.
Sbjct 814 TGGAACAAAGTCATCGAGCAGCTAGGAACTCCGTGTCCAGAGTTCATGAAGAAATTGCAGCCCACAGTCAGAAA 887
Query 774 TTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCCAGCTG 847
.|||||.||.||..|.||.||.||.||.|||...|.|||....||.|||||.||.|||..|||.||||||||.|
Sbjct 888 CTACGTGGAGAATCGGCCCAAGTACGCAGGACTCACCTTCCCCAAGCTCTTTCCAGATTCCCTCTTCCCAGCGG 961
Query 848 ACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATGCATCT 921
|.||.||.|||||.||||||||||||||.||.||.|||||||||||.||.||.|||.|.||.||.||..||.|.
Sbjct 962 ATTCTGAGCACAATAAACTTAAAGCCAGCCAAGCCAGGGATTTGTTGTCTAAGATGTTAGTGATTGACCCAGCG 1035
Query 922 AAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCAGAAGC 995
||.|||||.||.||.||.||.||.||.||.||.|||||||||||.||.|||||.||.||..||||||..||.||
Sbjct 1036 AAGAGGATATCGGTGGACGACGCACTGCAGCATCCGTACATCAACGTTTGGTACGACCCGGCTGAAGTGGAGGC 1109
Query 996 TCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATTGATAT 1069
.||.||.||..||||...|||.||||||.|.|||||||||||.|||||.||.|||||.|||||||||.|.||.|
Sbjct 1110 GCCTCCGCCTCAGATATATGATAAGCAGCTGGATGAAAGGGAGCACACCATCGAAGAATGGAAAGAACTTATCT 1183
Query 1070 ATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGG---AGTTATACGGGGGCAGCCCTCTCCTTTAGGT 1140
|.|||||.||.|||.|||..||.||||..||.|||||||| |||.|.| ||.||||||||.||||.||||
Sbjct 1184 ACAAGGAGGTAATGAACTCAGAAGAGAAGACTAAGAATGGCGTAGTCAAA---GGCCAGCCCTCGCCTTCAGGT 1254
Query 1141 GCAGCAGTGATCAATGGCTCTCAGCA---------TCCATCATCATCGTCGTCTGTCAATGATGTGTCTTCAAT 1205
|||||||||| .||||| |||.|| ||||.|||||||||||.||..|.||.||.||
Sbjct 1255 GCAGCAGTGA----------ACAGCAGTGAGAGTCTCCCTC--CATCCTCGTCTGTCAACGACATCTCCTCCAT 1316
Query 1206 GTCAACAGATCCGACTTTGGCCTCTGATACAGACAGCAGTCTAGAAGCAGCAGCTGGGCCTCTGGGCTGCTGTA 1279
|||.||.||.|.|||..|.||.|||||.||.||||||||.||.||.||..|.||.||.||..||||.||.||.|
Sbjct 1317 GTCCACCGACCAGACCCTCGCATCTGACACTGACAGCAGCCTGGAGGCCTCGGCGGGACCGTTGGGTTGTTGCA 1390
Query 1280 GA 1281
|.
Sbjct 1391 GG 1392