Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01355
Subject:
NM_133198.2
Aligned Length:
2553
Identities:
2266
Gaps:
15

Alignment

Query    1  ATGGCGAAGCCCCTGACGGACCAGGAGAAGCGGCGGCAGATCAGCATCCGCGGCATCGTGGGCGTGGAGAACGT  74
            |||||.|||||||||||.||||||||||||||.|||||||||||||||||.||||||||||||||.|||||.||
Sbjct    1  ATGGCAAAGCCCCTGACCGACCAGGAGAAGCGACGGCAGATCAGCATCCGAGGCATCGTGGGCGTAGAGAATGT  74

Query   75  GGCAGAGCTGAAGAAGAGTTTCAACCGGCACCTGCACTTCACGCTGGTCAAGGACCGCAACGTGGCCACCACCC  148
            |||.||||||||.|||.||||||||||.||||||||||||||.|||||||||||||||||.|||||||||.|||
Sbjct   75  GGCCGAGCTGAAAAAGGGTTTCAACCGTCACCTGCACTTCACTCTGGTCAAGGACCGCAATGTGGCCACCCCCC  148

Query  149  GCGACTACTACTTCGCGCTGGCGCACACGGTGCGCGACCACCTGGTGGGGCGCTGGATCCGCACGCAGCAGCAC  222
            ||||||||||||||||.||.||||||||.||||||||||||||||||||||||||||||||.||.|||||||||
Sbjct  149  GCGACTACTACTTCGCCCTTGCGCACACAGTGCGCGACCACCTGGTGGGGCGCTGGATCCGTACACAGCAGCAC  222

Query  223  TACTACGACAAGTGCCCCAAGAGGGTATATTACCTCTCTCTGGAATTTTACATGGGCCGAACATTACAGAACAC  296
            ||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TACTACGACAAGTGTCCCAAGAGGGTGTATTACCTCTCTCTGGAATTTTACATGGGCCGAACATTACAGAACAC  296

Query  297  CATGATCAACCTCGGTCTGCAAAATGCCTGTGATGAGGCCATTTACCAGCTTGGATTGGATATAGAAGAGTTAG  370
            ||||||||||||.||..|.|||||||||||.|||||||||||||||||||||||||||||.||.||||||||||
Sbjct  297  CATGATCAACCTTGGCTTACAAAATGCCTGCGATGAGGCCATTTACCAGCTTGGATTGGACATGGAAGAGTTAG  370

Query  371  AAGAAATTGAAGAAGATGCTGGACTTGGCAATGGTGGTCTTGGGAGACTTGCTGCCTGCTTCTTGGATTCCATG  444
            |||||||||||||||||||.||.|||||||||||.|||||||||||.|||||||||||||||.||||.||||||
Sbjct  371  AAGAAATTGAAGAAGATGCCGGCCTTGGCAATGGCGGTCTTGGGAGGCTTGCTGCCTGCTTCCTGGACTCCATG  444

Query  445  GCAACCCTGGGACTTGCAGCCTATGGATACGGCATTCGGTATGAATATGGGATTTTCAATCAGAAGATCCGAGA  518
            ||||||||||||||||||||||||||.|||||||||||.||||||||.||.||.||||||||||||||||||||
Sbjct  445  GCAACCCTGGGACTTGCAGCCTATGGCTACGGCATTCGTTATGAATACGGAATCTTCAATCAGAAGATCCGAGA  518

Query  519  TGGATGGCAGGTAGAAGAAGCAGATGATTGGCTCAGATATGGAAACCCTTGGGAGAAGTCCCGCCCAGAATTCA  592
            .|||||||||||||||||.||||||||.||||||||..||||||||||||||||||||.|.|||||.|||||||
Sbjct  519  GGGATGGCAGGTAGAAGAGGCAGATGACTGGCTCAGGCATGGAAACCCTTGGGAGAAGGCTCGCCCTGAATTCA  592

Query  593  TGCTGCCTGTGCACTTCTATGGAAAAGTAGAACACACCAACACCGGGACCAAGTGGATTGACACTCAAGTGGTC  666
            |||||||.|||||.|||||.||||.||||||.||||||.|.||.|||||.||||||.|.|||||.||.||||||
Sbjct  593  TGCTGCCCGTGCATTTCTACGGAAGAGTAGAGCACACCCAGACGGGGACAAAGTGGGTCGACACCCAGGTGGTC  666

Query  667  CTGGCTCTGCCATATGACACCCCCGTGCCCGGCTACATGAATAACACTGTCAACACCATGCGCCTCTGGTCTGC  740
            |||||||||||.||.||||||||||||||.||.||.|||||.||||||||.|||||.||||||||||||||.||
Sbjct  667  CTGGCTCTGCCTTACGACACCCCCGTGCCTGGATATATGAACAACACTGTGAACACTATGCGCCTCTGGTCGGC  740

Query  741  TCGGGCACCAAATGACTTTAACC-TCAGAGACTTTAATGTTGGAGACTACATTCAGGCTGTGCTGGACCGAAAC  813
            |||.||||||||||||||||||| ||| |||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct  741  TCGAGCACCAAATGACTTTAACCTTCA-AGATTTTAATGTTGGAGACTACATTCAGGCTGTGCTGGACCGGAAC  813

Query  814  CTGGCCGAGAACATCTCCCGGGTCCTCTATCCCAATGACAATTTTTTTGAAGGGAAGGAGCTAAGATTGAAGCA  887
            |||||.|||||.||||||.|.||.|||||.||||||||.||.||.|||||||||||||||.|..|..||||.||
Sbjct  814  CTGGCTGAGAATATCTCCAGAGTGCTCTACCCCAATGATAACTTCTTTGAAGGGAAGGAGTTGCGGCTGAAACA  887

Query  888  GGAATACTTTGTGGTGGCTGCAACCTTGCAAGATATCATCCGCCGTTTCAAAGCCTCCAAGTTTGGCTCCACCC  961
            |||.|||||||||||||||||.|||.||||.|||.|||||||.||.|||||.|||||||||||.|||||||...
Sbjct  888  GGAGTACTTTGTGGTGGCTGCCACCCTGCAGGATGTCATCCGGCGCTTCAAGGCCTCCAAGTTCGGCTCCAAGG  961

Query  962  GTGGTGCA--GGAACTGTGTTTGATGCCTTCCCGGATCAGGTGGCCATCCAGCTGAATGACACTCACCCTGCAC  1033
            .||  |||  |||||.||||||||||||||.||.||||||||.||||||||||||||||||||.||.|||||||
Sbjct  962  ATG--GCATGGGAACCGTGTTTGATGCCTTTCCAGATCAGGTAGCCATCCAGCTGAATGACACACATCCTGCAC  1033

Query 1034  TCGCGATCCCTGAGCTGATGAGGATTTTTGTGGATATTGAAAAACTGCCCTGGTCCAAGGCATGGGAGCTCACC  1107
            ||||.||.||.|||||||||||||||||||||||.||||||||||||||||||.||||||||||||||.||||.
Sbjct 1034  TCGCCATTCCAGAGCTGATGAGGATTTTTGTGGACATTGAAAAACTGCCCTGGGCCAAGGCATGGGAGATCACG  1107

Query 1108  CAGAAGACCTTCGCCTACACCAACCACACAGTGCTCCCGGAAGCCCTGGAGCGCTGGCCCGTGGACCTGGTGGA  1181
            .||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||.|||||.||||||||
Sbjct 1108  AAGAAGACCTTCGCCTACACCAACCACACGGTGCTCCCGGAGGCCCTGGAGCGCTGGCCGGTGGAACTGGTGGA  1181

Query 1182  GAAGCTGCTCCCTCGACATTTGGAAATCATTTATGAGATAAATCAGAAGCATTTAGATAGAATTGTGGCCTTGT  1255
            |||||||||.||||||||.|||||.||||||||||||||.||||||||.||||||||.||||||||||||||||
Sbjct 1182  GAAGCTGCTGCCTCGACACTTGGAGATCATTTATGAGATCAATCAGAAACATTTAGACAGAATTGTGGCCTTGT  1255

Query 1256  TTCCTAAAGATGTGGACCGTCTGAGAAGGATGTCTCTGATAGAAGAGGAAGGAAGCAAAAGGATCAACATGGCC  1329
            ||||||||||..|...|||..||.|.||.||||||||.||.||.|||||||||.|||||.||||||||||||||
Sbjct 1256  TTCCTAAAGACATCAGCCGCATGCGGAGAATGTCTCTCATTGAGGAGGAAGGAGGCAAACGGATCAACATGGCC  1329

Query 1330  CATCTCTGCATTGTCGGTTCCCATGCTGTGAATGGCGTGGCTAAAATCCACTCAGACATCGTGAAGACTAAAGT  1403
            ||.||||||||.||.||.|.|||.||.|||||.||.||.||.||.||||||||.||||||||||||||..||||
Sbjct 1330  CACCTCTGCATCGTGGGCTGCCACGCGGTGAACGGTGTAGCAAAGATCCACTCGGACATCGTGAAGACCCAAGT  1403

Query 1404  ATTCAAGGACTTCAGTGAGCTAGAACCTGACAAGTTTCAGAATAAAACCAATGGGATCACTCCAAGGCGCTGGC  1477
            |||||||||||||||.|||||||||||.||||||||.||||||||||||||.|||||.||.||.||||||||||
Sbjct 1404  ATTCAAGGACTTCAGCGAGCTAGAACCAGACAAGTTCCAGAATAAAACCAACGGGATTACCCCGAGGCGCTGGC  1477

Query 1478  TCCTACTCTGCAACCCAGGACTTGCAGAGCTCATAGCAGAGAAAATTGGAGAAGACTATGTGAAAGACCTGAGC  1551
            |||||||||||||||||||.||.||.||..|.|||||.||||||||||||||.||.||||||||||||||||||
Sbjct 1478  TCCTACTCTGCAACCCAGGGCTGGCTGACTTGATAGCGGAGAAAATTGGAGAGGATTATGTGAAAGACCTGAGC  1551

Query 1552  CAGCTGACGAAGCTCCACAGCTTCCTGGGTGATGATGTCTTCCTCCGGGAACTCGCCAAGGTGAAGCAGGAGAA  1625
            ||||||||||||||||||||.||..||.|||||||..||||||||||||||.|.|||||.|||||.|||||.||
Sbjct 1552  CAGCTGACGAAGCTCCACAGTTTTGTGAGTGATGACATCTTCCTCCGGGAAATAGCCAAAGTGAAACAGGAAAA  1625

Query 1626  TAAGCTGAAGTTTTCTCAGTTCCTGGAGACGGAGTACAAAGTGAAGATCAACCCATCCTCCATGTTTGATGTCC  1699
            |||||||||.||.||.|||||||||||||.|||.|||||.||||||||||||||||||||||||||||||||||
Sbjct 1626  TAAGCTGAAATTCTCCCAGTTCCTGGAGAAGGAATACAAGGTGAAGATCAACCCATCCTCCATGTTTGATGTCC  1699

Query 1700  AGGTGAAGAGGATACATGAGTACAAGCGACAGCTCTTGAACTGTCTGCATGTGATCACGATGTACAACCGCATT  1773
            |.||||||.||||.||.|||||.||..|.|||||..|||||||.||||||||||||||.||||||||.|||||.
Sbjct 1700  ATGTGAAGCGGATCCACGAGTATAAAAGGCAGCTTCTGAACTGCCTGCATGTGATCACCATGTACAATCGCATC  1773

Query 1774  AAGAAAGACCCTAAGAAGTTATTCGTGCCAAGGACAGTTATCATTGGTGGTAAAGCTGCCCCAGGATATCACAT  1847
            |||||||||||||||||.||.|||||||||||||||||.||.||||||||.|||||||||||||||||||||||
Sbjct 1774  AAGAAAGACCCTAAGAAATTCTTCGTGCCAAGGACAGTCATAATTGGTGGCAAAGCTGCCCCAGGATATCACAT  1847

Query 1848  GGCCAAAATGATCATAAAGCTGATCACTTCAGTGGCAGATGTGGTGAACAATGACCCTATGGTTGGAAGCAAGT  1921
            |||||||||||||||||||||||||||.||.||||||||.|||||||||||||||||.|||||.||.|||||||
Sbjct 1848  GGCCAAAATGATCATAAAGCTGATCACCTCTGTGGCAGAAGTGGTGAACAATGACCCCATGGTCGGCAGCAAGT  1921

Query 1922  TGAAAGTCATCTTCTTGGAGAACTACAGAGTATCTCTTGCTGAAAAAGTCATTCCAGCCACAGATCTGTCAGAG  1995
            |||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.||.||.|||
Sbjct 1922  TGAAAGTCATCTTCTTGGAGAACTACAGAGTGTCTCTTGCCGAAAAAGTCATTCCAGCCACAGACCTATCGGAG  1995

Query 1996  CAGATTTCCACTGCAGGCACCGAAGCCTCGGGGACAGGCAATATGAAGTTCATGCTAAATGGGGCCCTAACTAT  2069
            |||||.|||||.||||||||.||||||||.|||||||||||.||||||||||||||.||.||||||||.||.||
Sbjct 1996  CAGATCTCCACGGCAGGCACGGAAGCCTCCGGGACAGGCAACATGAAGTTCATGCTGAACGGGGCCCTGACCAT  2069

Query 2070  CGGGACCATGGATGGGGCCAATGTGGAAATGGCAGAAGAAGCTGGGGAAGAGAACCTGTTCATCTTTGGCATGA  2143
            ||||||.||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||
Sbjct 2070  CGGGACTATGGATGGGGCCAATGTGGAGATGGCAGAGGAAGCTGGGGAGGAGAACCTGTTCATCTTTGGCATGA  2143

Query 2144  GGATAGATGATGTGGCTGCTTTGGACAAGAAAGGGTACGAGGCAAAAGAATACTATGAGGCACTTCCAGAGCTG  2217
            |..||||||||||||||||||||||.|||||.|||||.|||||.||||||||.||.|||||.||||||||.|||
Sbjct 2144  GAGTAGATGATGTGGCTGCTTTGGATAAGAAGGGGTATGAGGCCAAAGAATATTACGAGGCCCTTCCAGAACTG  2217

Query 2218  AAGCTGGTCATTGATCAAATTGACAATGGCTTTTTTTCTCCCAAGCAGCCTGACCTCTTCAAAGATATCATCAA  2291
            |||.|||||||.||.|||||.|||||||||||.|||||||||||.|||||.||||||||||||||.||||||||
Sbjct 2218  AAGTTGGTCATCGACCAAATCGACAATGGCTTCTTTTCTCCCAATCAGCCAGACCTCTTCAAAGACATCATCAA  2291

Query 2292  CATGCTATTTTATCATGACAGGTTTAAAGTCTTTGCAGACTACGAAGCCTATGTCAAGTGTCAAGATAAAGTGA  2365
            ||||.||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct 2292  CATGTTATTTTATCATGACAGATTTAAAGTCTTTGCAGACTACGAAGCCTATGTCAAGTGTCAAGAAAAAGTCA  2365

Query 2366  GTCAGCTGTACATGAATCCAAAGGCCTGGAACACAATGGTACTCAAAAACATAGCTGCCTCGGGGAAATTCTCC  2439
            ||||||||||.|||||||.|||.||||||||||||||||||||||||||||||||||||||.|||||.||||||
Sbjct 2366  GTCAGCTGTATATGAATCAAAAAGCCTGGAACACAATGGTACTCAAAAACATAGCTGCCTCAGGGAAGTTCTCC  2439

Query 2440  AGTGACCGAACAATTAAAGAATATGCCCAAAACATCTGGAACGTGGAACCTTCAGATCTAAAGATTTCTCTATC  2513
            |||||||||||||||||.||.||||||.|..|||||||||||.||||.|||||.|||||.||||||||.|||||
Sbjct 2440  AGTGACCGAACAATTAAGGAGTATGCCAAGGACATCTGGAACATGGAGCCTTCGGATCTGAAGATTTCCCTATC  2513

Query 2514  CAATGAATCTAACAA-------AGT--CAATGGAAAT  2541
            |||.||.||.|.|||       |||  ||||||.||.
Sbjct 2514  CAACGAGTCCAGCAATGGGGTCAGTGCCAATGGGAAG  2550

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