Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01486
- Subject:
- NM_001357857.2
- Aligned Length:
- 2445
- Identities:
- 555
- Gaps:
- 1890
Alignment
Query 1 ATGAAATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGTC 74
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------------ATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGTC 45
Query 75 CTCCGAGGAGAAGGCCCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAACC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46 CTCCGAGGAGAAGGCCCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAACC 119
Query 149 CTGGTGGCCGGGGCCACGGGGGCGGGAGGCATGGGCCGGCAGGGACCTCGGTGGAGCTTGGTTTACAACAGGGA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CTGGTGGCCGGGGCCACGGGGGCGGGAGGCATGGGCCGGCAGGGACCTCGGTGGAGCTTGGTTTACAACAGGGA 193
Query 223 ATAGGTTTACACAAAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGGC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 ATAGGTTTACACAAAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGGC 267
Query 297 CACCACGCTGCCTGCCGCGTACGCCACCCCGCAGCCAGGGACCCCGGTGTCCCCCGTGCAGTACGCTCACCTGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 268 CACCACGCTGCCTGCCGCGTACGCCACCCCGCAGCCAGGGACCCCGGTGTCCCCCGTGCAGTACGCTCACCTGC 341
Query 371 CGCACACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGAACCTATGCCAGCTTCATCCCATCACAGCTGATC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 CGCACACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGAACCTATGCCAGCTTCATCCCATCACAGCTGATC 415
Query 445 CCCCCAACCGCCAACCCCGTCACCAGTGCAGTGGCCTCGGCCGCAGGGGCCACCACTCCATCCCAGCGCTCCCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CCCCCAACCGCCAACCCCGTCACCAGTGCAGTGGCCTCGGCCGCAGGGGCCACCACTCCATCCCAGCGCTCCCA 489
Query 519 GCTGGAGGCCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAGC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 490 GCTGGAGGCCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGC-------- 555
Query 593 AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 666
Sbjct 556 -------------------------------------------------------------------------- 555
Query 667 CAGCAGCAGCACCTCAGCAGGGCTCCGGGGCTCATCACCCCGGGGTCCCCCCCACCAGCCCAGCAGAACCAGTA 740
Sbjct 556 -------------------------------------------------------------------------- 555
Query 741 CGTCCACATTTCCAGTTCTCCGCAGAACACCGGCCGCACCGCCTCTCCTCCGGCCATCCCCGTCCACCTCCACC 814
Sbjct 556 -------------------------------------------------------------------------- 555
Query 815 CCCACCAGACGATGATCCCACACACGCTCACCCTGGGGCCCCCCTCCCAGGTCGTCATGCAATACGCCGACTCC 888
Sbjct 556 -------------------------------------------------------------------------- 555
Query 889 GGCAGCCACTTTGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGGCCAA 962
Sbjct 556 -------------------------------------------------------------------------- 555
Query 963 GGAGGTCCTGAACGGTGAGATGGAGAAGAGCCGGCGGTACGGGGCCCCGTCCTCAGCCGACCTGGGCCTGGGCA 1036
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1037 AGGCAGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCGAGCCCCTCAGACTAC 1110
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1111 AGCAGTCGTGATCCTTCGGGGGTCCGGGCCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTGACCT 1184
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1185 GGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCCTTCTACCCTCAACGACAAAAGTGGCCTGCATTTAGGGA 1258
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1259 AGCCTGGCCACCGGTCCTACGCGCTCTCACCCCACACGGTCATTCAGACCACACACAGTGCTTCAGAGCCACTC 1332
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1333 CCGGTGGGACTGCCAGCCACGGCCTTCTACGCAGGGACTCAACCCCCTGTCATCGGCTACCTGAGCGGCCAGCA 1406
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1407 GCAAGCAATCACCTACGCCGGCAGCCTGCCCCAGCACCTGGTGATCCCCGGCACACAGCCCCTGCTCATCCCGG 1480
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1481 TCGGCAGCACTGACATGGAAGCGTCGGGGGCAGCCCCGGCCATAGTCACGTCATCCCCCCAGTTTGCTGCAGTG 1554
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1555 CCTCACACGTTCGTCACCACCGCCCTTCCCAAGAGCGAGAACTTCAACCCTGAGGCCCTGGTCACCCAGGCCGC 1628
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1629 CTACCCAGCCATGGTGCAGGCCCAGATCCACCTGCCTGTGGTGCAGTCCGTGGCCTCCCCGGCGGCGGCTCCCC 1702
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1703 CTACGCTGCCTCCCTACTTCATGAAAGGCTCCATCATCCAGTTGGCCAACGGGGAGCTAAAGAAGGTGGAAGAC 1776
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1777 TTAAAAACAGAAGATTTCATCCAGAGTGCAGAGATAAGCAACGACCTGAAGATCGACTCCAGCACCGTAGAGAG 1850
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1851 GATTGAAGACAGCCATAGCCCGGGCGTGGCCGTGATACAGTTCGCCGTCGGGGAGCACCGAGCCCAGGTCAGCG 1924
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1925 TTGAAGTTTTGGTAGAGTATCCTTTTTTTGTGTTTGGACAGGGCTGGTCATCCTGCTGTCCGGAGAGAACCAGC 1998
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1999 CAGCTCTTTGATTTGCCGTGTTCCAAACTCTCAGTTGGGGATGTCTGCATCTCGCTTACCCTCAAGAACCTGAA 2072
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2073 GAACGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCC 2146
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2147 TGGCGGGCAGCAGACACAGGTATGCCGAGCAGGAAAACGGAATCAACCAGGGGAGTGCCCAGATGCTCTCTGAG 2220
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2221 AATGGCGAACTGAAGTTTCCAGAGAAAATGGGATTGCCTGCAGCGCCCTTCCTCACCAAAATAGAACCCAGCAA 2294
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2295 GCCCGCGGCAACGAGGAAGAGGAGGTGGTCGGCGCCAGAGAGCCGCAAACTGGAGAAGTCAGAAGACGAACCAC 2368
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2369 CTTTGACTCTTCCTAAGCCTTCTCTAATTCCTCAGGAGGTTAAGATTTGCATTGAAGGCCGGTCTAATGTAGGC 2442
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2443 AAG 2445
Sbjct 556 --- 555
