Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01486
Subject:
XM_011244381.2
Aligned Length:
2452
Identities:
2049
Gaps:
86

Alignment

Query    1  ATGAAATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGTC  74
            |||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||.|
Sbjct    1  ATGAAATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAACGTGAGATCCCCGCCACCAGCCGGCC  74

Query   75  CTCCGAGGAGAAGGCCCCTACCCTGCCCAGCGACAACCACCGGGTGGAGGGCACAGCATGGCTCCCGGGCAACC  148
            |||.||||||||||||.||.|.||||||||||||||||||.|.||||||||....||.||||||||..|||.||
Sbjct   75  CTCGGAGGAGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGTGGCCTGGCTCCCCAGCACCC  148

Query  149  CTGGTGGCCGGGGCCACGGGGGCGGGAGGCATGGGCCGGCAGGGACCTCGGTGGAGCTTGGTTTACAACAGGGA  222
            ||||...|||.|||||.|||||.|||.||||.|||.|.||||||||.||.|.|||||.||||||||||   |||
Sbjct  149  CTGGCATCCGCGGCCATGGGGGTGGGCGGCACGGGTCAGCAGGGACTTCCGGGGAGCATGGTTTACAA---GGA  219

Query  223  ATAGGTTTACACAAAGCATTGTCCACAGGGCTGGACTACTCCCCGCCCAGCGCTCCCAGGTCTGTCCCCGTGGC  296
            ||.||||||||.||||||.|||||.||||||||||.||||||||.|||||.||.||||||||.||||||...||
Sbjct  220  ATGGGTTTACATAAAGCACTGTCCGCAGGGCTGGATTACTCCCCACCCAGTGCCCCCAGGTCAGTCCCCACAGC  293

Query  297  CACCACGCTGCCTGCCGCGTACGCCACC-CCGCAGCCAGGGACCCCGGTGTCCCCCGTGCAGTACGCTCACCTG  369
            ||.|||||||||..|||.|||| ||.|| ||.|||.||||||||||||||||.||.|||||||||||.|||||.
Sbjct  294  CAACACGCTGCCCACCGTGTAC-CCTCCTCCTCAGTCAGGGACCCCGGTGTCTCCTGTGCAGTACGCCCACCTT  366

Query  370  CCGCACACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGAACCTATGCCAGCTTCATCCCATCACAGCTGAT  443
            .||||.|||||||||||||||||||||||||||||||||||..|.||.||..||||.|||||.||.||||||||
Sbjct  367  TCGCATACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGGCCTTACGCGGGCTTTATCCCTTCCCAGCTGAT  440

Query  444  CCCCCCAACCGCCAACCCCGTCACCAGTGCAGTGGCCTCGGCCGCAGGGGCCACCACTCCATCCCAGCGCTCCC  517
            |.|||||.|.|.||||||.||||||||||||||.|||||.||.||||||||||||||||||||.||||||||||
Sbjct  441  CTCCCCATCAGGCAACCCGGTCACCAGTGCAGTAGCCTCAGCTGCAGGGGCCACCACTCCATCACAGCGCTCCC  514

Query  518  AGCTGGAGGCCTATTCCACTCTGCTGGCCAACATGGGCAGTCTGAGCCAGACGCCGGGACACAAGGCTGAGCAG  591
            ||||||||||.||||||||.||||||||||||||||||||||||||||||.|.||.|||||.||||.||     
Sbjct  515  AGCTGGAGGCTTATTCCACCCTGCTGGCCAACATGGGCAGTCTGAGCCAGGCACCAGGACATAAGGTTG-----  583

Query  592  CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA  665
                                                                               |||..|.
Sbjct  584  -------------------------------------------------------------------AGCCCCC  590

Query  666  GCAGCAGCAGCACCTCAGCAGGGCTCCGGGGCTCATCACCCCGGGGTCC---CCCCCACCAGCCCAGCAGAACC  736
            .|.||||||||||||||||||||||.|.||..|..|||.||||||||||   ||.|||||..||||||||||||
Sbjct  591  TCCGCAGCAGCACCTCAGCAGGGCTGCAGGATTAGTCAACCCGGGGTCCCCTCCTCCACCCACCCAGCAGAACC  664

Query  737  AGTACGTCCACATTTCCAGTTCTCCGCAGAACACCGGCCGCACCGCCTCTCCTCCGGCCATCCCCGTCCACCTC  810
            |||||.||||.||||||||.|||||.||||.|.||||.||..|..|.|||||.||..|||||||.|||||||||
Sbjct  665  AGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGGGCGACATCTCCCCCACCCATCCCGGTCCACCTC  738

Query  811  CACCCCCACCAGACGATGATCCCACACACGCTCACCCTGGGGCCCCCCTCCCAGGTCGTCATGCAATACGCCGA  884
            ||.|||||.||||||||||||||.|||||.||||||||||||||..|.||||||||.||..|||||||....||
Sbjct  739  CATCCCCATCAGACGATGATCCCGCACACACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTGCAATATAGTGA  812

Query  885  CTCCGGCAGCCACTTTGTCCCTCGGGAGGCCACCAAGAAAGCTGAGAGCAGCCGGCTGCAGCAGGCCATCCAGG  958
            ..||||..||||||||||.|||||.|||.|||||||.|||||.|||||||||.||.||||||||||.||.||.|
Sbjct  813  TGCCGGAGGCCACTTTGTTCCTCGAGAGTCCACCAAAAAAGCCGAGAGCAGCAGGTTGCAGCAGGCTATGCAAG  886

Query  959  CCAAGGAGGTCCTGAACGGTGAGATGGAGAAGAGCCGGCGGTACGGGGCCCCGTCCTCAGCCGACCTGGGCCTG  1032
            |||||||.||||||||.||.|||||||||||.||||||.||||.|||||..|.||.||.|..||.|||.||||.
Sbjct  887  CCAAGGAAGTCCTGAATGGGGAGATGGAGAAAAGCCGGAGGTATGGGGCATCATCTTCTGTGGAGCTGAGCCTA  960

Query 1033  GGCAAGGCAGGCGGCAAGTCGGTTCCTCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCGAGCCCCTCAGA  1106
            |||||||||.||.|.|||||.||.|||||.||.||.|||||||||||.||||||||||||||.|||||..||||
Sbjct  961  GGCAAGGCAAGCAGTAAGTCAGTGCCTCATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGA  1034

Query 1107  CTACAGCAGTCGTGATCCTTCGGGGGTCCGGGCCTCTGTGATGGTCCTGCCCAACAGCAACACGCCCGCAGCTG  1180
            ||||||||||||||||.|.||.||||||||.|..|||||||||||.|||||.||.||||.|||.|||.||||.|
Sbjct 1035  CTACAGCAGTCGTGATACCTCCGGGGTCCGTGGATCTGTGATGGTTCTGCCTAATAGCAGCACACCCTCAGCCG  1108

Query 1181  ACCTGGAGGTGCAACAGGCCACTCATCGTGAAGCCTCCCCTTCTACCCTCAACGACAAAAGTGGCCTGCATTTA  1254
            |||||||||..||.|||.||||.|||||.||.||||||||.||.||||||||.|||||.||.||||||||..||
Sbjct 1109  ACCTGGAGGCCCAGCAGACCACGCATCGAGAGGCCTCCCCATCCACCCTCAATGACAAGAGCGGCCTGCACCTA  1182

Query 1255  GGGAAGCCTGGCCACCGGTCCTACGCGCTCTCACCCCACACGGTCATTCAGACCACACACAGTGCTTCAGAGCC  1328
            ||||||||.||||||.||||.||.|||||.||.||||||||||||||||||||||||||||||||.||||||||
Sbjct 1183  GGGAAGCCGGGCCACAGGTCTTATGCGCTGTCCCCCCACACGGTCATTCAGACCACACACAGTGCATCAGAGCC  1256

Query 1329  ACTCCCGGTGGGACTGCCAGCCACGGCCTTCTACGCAGGGACTCAACCCCCTGTCATCGGCTACCTGAGCGGCC  1402
            .|||||||||||.||.||||||||||||||||||||.||.||||||||.|||||||||||||||||||||||||
Sbjct 1257  TCTCCCGGTGGGCCTACCAGCCACGGCCTTCTACGCTGGCACTCAACCTCCTGTCATCGGCTACCTGAGCGGCC  1330

Query 1403  AGCAGCAAGCAATCACCTACGCCGGCAGCCTGCCCCAGCACCTGGTGATCCCCGGCACACAGCCCCTGCTCATC  1476
            |||||||||||||||||||.||.||..|.|||||.|||||||||||||||||.||.|..|||||||||||||||
Sbjct 1331  AGCAGCAAGCAATCACCTATGCTGGTGGTCTGCCGCAGCACCTGGTGATCCCAGGTAACCAGCCCCTGCTCATC  1404

Query 1477  CCGGTCGGCAGCACTGACATGGAAGCGTCGGGGGCAGCCCCGGCCATAGTCACGTCATCCCCCCAGTTTGCTGC  1550
            |||||.||||||.||||||||||..||.|.|||||||||.|||||||.||.||||||||.||||||||||||||
Sbjct 1405  CCGGTGGGCAGCCCTGACATGGACACGCCTGGGGCAGCCTCGGCCATCGTGACGTCATCACCCCAGTTTGCTGC  1478

Query 1551  AGTGCCTCACACGTTCGTCACCACCGCCCTTCCCAAGAGCGAGAACTTCAACCCTGAGGCCCTGGTCACCCAGG  1624
            |||.|||||||||||.||||||||||||||.|||||||||||||||||||||||.|||||.|||||||||||||
Sbjct 1479  AGTACCTCACACGTTTGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGGTCACCCAGG  1552

Query 1625  CCGCCTACCCAGCCATGGTGCAGGCCCAGATCCACCTGCCTGTGGTGCAGTCCGTGGCCTCCC---CGGCGGCG  1695
            |.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||   |..|||||
Sbjct 1553  CTGCCTACCCAGCCATGGTGCAGGCCCAGATCCACCTGCCGGTGGTGCAGTCCGTGGCGTCCCCCACCACGGCG  1626

Query 1696  GCTCCCCCTACGCTGCCTCCCTACTTCATGAAAGGCTCCATCATCCAGTTGGCCAACGGGGAGCTAAAGAAGGT  1769
            .|||||   ||||||||.||.||.||||||||||||||||||||||||.||||||||||||||||.||||||||
Sbjct 1627  TCTCCC---ACGCTGCCGCCATATTTCATGAAAGGCTCCATCATCCAGCTGGCCAACGGGGAGCTGAAGAAGGT  1697

Query 1770  GGAAGACTTAAAAACAGAAGATTTCATCCAGAGTGCAGAGATAAGCAACGACCTGAAGATCGACTCCAGCACCG  1843
            |||.|||.|.||.||.||.|||||||||||||||||||||||.|||||.|||||.||||||||||||||.||.|
Sbjct 1698  GGAGGACCTGAAGACGGAGGATTTCATCCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGACTCCAGTACTG  1771

Query 1844  TAGAGAGGATTGAAGACAGCCATAGCCCGGGCGTGGCCGTGATACAGTTCGCCGTCGGGGAGCACCGAGCCCAG  1917
            |.|||||.||.||.||.|||||.|||||.||.|||||||||||||||||.||.||.||.||.||||||||||||
Sbjct 1772  TGGAGAGAATCGAGGAGAGCCACAGCCCCGGGGTGGCCGTGATACAGTTTGCTGTTGGTGAACACCGAGCCCAG  1845

Query 1918  GTCAGCGTTGAAGTTTTGGTAGAGTATCCTTTTTTTGTGTTTGGACAGGGCTGGTCATCCTGCTGTCCGGAGAG  1991
            |||||.||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||.|
Sbjct 1846  GTCAGTGTCGAAGTCTTGGTAGAGTATCCTTTTTTTGTATTTGGACAGGGCTGGTCATCCTGCTGTCCTGAGCG  1919

Query 1992  AACCAGCCAGCTCTTTGATTTGCCGTGTTCCAAACTCTCAGTTGGGGATGTCTGCATCTCGCTTACCCTCAAGA  2065
            .||||||||||||||||||.|||||||||||||||||||.||||||||.||||||||||||||.||||||||||
Sbjct 1920  GACCAGCCAGCTCTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGACGTCTGCATCTCGCTCACCCTCAAGA  1993

Query 2066  ACCTGAAGAACGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCCGCCAGCGTCCTGCTGAAGCACTCAAAGGCC  2139
            ||||||||||.|||||||||||||||||||||||.|||||.||.||||||||||||||||||||..|||||.||
Sbjct 1994  ACCTGAAGAATGGCTCTGTTAAAAAGGGCCAGCCTGTGGACCCTGCCAGCGTCCTGCTGAAGCAGGCAAAGACC  2067

Query 2140  GACGGCCTGGCGGGCAGCAGACACAGGTATGCCGAGCAGGAAAACGGAATCAACCAGGGGAGTGCCCAGATGCT  2213
            |||.|||||||.||||||||||||||.||.||.||||||||||||||||||||||||||.||.||||||.||||
Sbjct 2068  GACAGCCTGGCTGGCAGCAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCT  2141

Query 2214  CTCTGAGAATGGCGAACTGAAGTTTCCAGAGAAAATGGGATTGCCTGCAGCGCCCTTCCTCACCAAAATAGAAC  2287
            ||||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||.|||||||||||
Sbjct 2142  CTCTGAGAATGGCGAACTGAAGTTTCCAGAAAAAATAGGATTGCCTGCAGCACCCTTCCTCAGCAAAATAGAAC  2215

Query 2288  CCAGCAAGCCCGCGGCAACGAGGAAGAGGAGGTGGTCGGCGCCAGAGAGCCGCAAACTGGAGAAGTCAGAAGAC  2361
            |.|||||.|||.|.||.||||||||||||||||||||||||||.||||.|||.||||||||||||||.||.|||
Sbjct 2216  CGAGCAAACCCACAGCCACGAGGAAGAGGAGGTGGTCGGCGCCGGAGACCCGTAAACTGGAGAAGTCGGAGGAC  2289

Query 2362  GAACCACCTTTGACTCTTCCTAAGCCTTCTCTAATTCCTCAGGAGGTTAAGATTTGCATTGAAGGCCGGTCTAA  2435
            ||.|||||||||||||||||.||||||||.||.||||||||||||||||||||.|||||.||||||||.|||||
Sbjct 2290  GAGCCACCTTTGACTCTTCCCAAGCCTTCGCTCATTCCTCAGGAGGTTAAGATCTGCATCGAAGGCCGATCTAA  2363

Query 2436  TGTAGGCAAG  2445
            .||.||||||
Sbjct 2364  CGTGGGCAAG  2373

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