Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01521
Subject:
XR_429911.3
Aligned Length:
4449
Identities:
744
Gaps:
3705

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATATCCGTGCGCCGAGCTGATAAAGGCGCCATTTTGGAGGGGCCGCGGGAGACGTGGTGCCGCTGCGGGCTCGC  74

Query    1  --------------------------------------------------------------ATGTCGGGAGGT  12
                                                                          ||||||||||||
Sbjct   75  TCTGCCGTGCGCTAGGCTTGGTGGGAAGGCCTGTTCTCGAGTCCGCGCTTTTCGTCACCGCCATGTCGGGAGGT  148

Query   13  GGTGTGATTCGTGGCCCCGCAGGGAACAACGATTGCCGCATCTACGTGGGTAACTTACCTCCAGACATCCGAAC  86
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGTGTGATTCGTGGCCCCGCAGGGAACAACGATTGCCGCATCTACGTGGGTAACTTACCTCCAGACATCCGAAC  222

Query   87  CAAGGACATTGAGGACGTGTTCTACAAATACGGCGCTATCCGCGACATCGACCTCAAGAATCGCCGCGGGGGAC  160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAAGGACATTGAGGACGTGTTCTACAAATACGGCGCTATCCGCGACATCGACCTCAAGAATCGCCGCGGGGGAC  296

Query  161  CGCCCTTCGCCTTCGTTGAGTTCGAGGACCCGCGAGACGCGGAAGACGCGGTGTATGGTCGCGACGGCTATGAT  234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGCCCTTCGCCTTCGTTGAGTTCGAGGACCCGCGAGACGCGGAAGACGCGGTGTATGGTCGCGACGGCTATGAT  370

Query  235  TACGATGGGTACCGTCTGCGGGTGGAGTTTCCTCGAAGCGGCCGTGGAACAGGCCGAGGCGGCGGCGGGGGTGG  308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TACGATGGGTACCGTCTGCGGGTGGAGTTTCCTCGAAGCGGCCGTGGAACAGGCCGAGGCGGCGGCGGGGGTGG  444

Query  309  AGGTGGCGGAGCTCCCCGAGGTCGCTATGGCCCCCCATCCAGGCGGTCTGAAAACAGAGTGGTTGTCTCTGGAC  382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AGGTGGCGGAGCTCCCCGAGGTCGCTATGGCCCCCCATCCAGGCGGTCTGAAAACAGAGTGGTTGTCTCTGGAC  518

Query  383  TGCCTCCAAGTGGAAGTTGGCAGGATTTAAAGGATCACATGCGTGAAGCAGGTGATGTATGTTATGCTGATGTT  456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGCCTCCAAGTGGAAGTTGGCAGGATTTAAAGGATCACATGCGTGAAGCAGGTGATGTATGTTATGCTGATGTT  592

Query  457  TACCGAGATGGCACTGGTGTCGTGGAGTTTGTACGGAAAGAAGATATGACCTATGCAGTTCGAAAACTGGATAA  530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TACCGAGATGGCACTGGTGTCGTGGAGTTTGTACGGAAAGAAGATATGACCTATGCAGTTCGAAAACTGGATAA  666

Query  531  CACTAAGTTTAGATCTCATGAGGGAGAAACTGCCTACATCCGGGTTAAAGTTGATGGGCCCAGAAGTCCAAGTT  604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CACTAAGTTTAGATCTCATGAGGGAGAAACTGCCTACATCCGGGTTAAAGTTGATGGGCCCAGAAGTCCAAGTT  740

Query  605  ATGGAAGATCTCGATCTCGAAGCCGTAGTCGTAGCAGAAGCCGTAGCAGAAGCAACAGCAGGAGTCGCAGTTAC  678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATGGAAGATCTCGATCTCGAAGCCGTAGTCGTAGCAGAAGCCGTAGCAGAAGCAACAGCAGGAGTCGCAGTTAC  814

Query  679  TCCCCAAGGAGAAGCAGAGGATCACCACGCTATTCTCCCCGTCATAGCAGATCTCGCTCTCGTACA--------  744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct  815  TCCCCAAGGAGAAGCAGAGGATCACCACGCTATTCTCCCCGTCATAGCAGATCTCGCTCTCGTACATAAGATGA  888

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct  889  TTGGTGACACTTTTTGTAGAACCCATGTTGTATACAGTTTTCCTTTATTCAGTACAATCTTTTCATTTTTTAAT  962

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct  963  TCAAACTGTTTTGTTCAGAATGGGCTAAAGTGTTGAATTGCATTCTTGTAATATCCCCTTGCTCCTAACATCTA  1036

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1037  CATTCCCTTCGTGTCTTTGATAAATTGTATTTTAAGTGATGTCATAGACAGGATTGTTTAAATTTAGTTAACTC  1110

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1111  CATACTCTTCAGACTGTGATATTGTGTAAATGTCTATCTGCCCTGGTTTGTGTGAACTGGGATGTTGGGGGTGT  1184

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1185  TTGTGGTTATCTTACCTGGGGAAGTTCTTATGTTTATCTTGCTTTTCATGTGTCTTTCTGTAGACATATCTGAA  1258

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1259  GAGATGGATTAAGAATGCTTTGGATTAAGGATTGTGGAGCACATTTCAATCATTTTAGGATTGTCAAAAGGAGG  1332

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1333  ATTGAGGAGGATCAGATCAATAATGGAGGCAATGGTTTGGATTGGAGAGGGCTCACTGGATCCCAATCCTTGGA  1406

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1407  GCTGGATCATTGGATTCAAATCATAATGTGGATAGGATAGGGAGGATGAATTACCAGGATTCATGGAGCGGGAT  1480

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1481  CAGATTACCAGGAACATAGGAGTGGATTCCTGCCCCAACCAAACCGCATTCGTGTGGATTTTTTTATTCAACTT  1554

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1555  AATTGGCTATTCCAAAGATTTTTTTTTTCCTATTTTTGACGATTGGAGCCCTTAAGATGCACGATGGAATTGTG  1628

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1629  TTTTGCGTTTTTTGGTAAAAGGAGCAAAGCGAGGACCTGGAGATAAACGCTGGAGCAATCTCCTTGGAAGGATT  1702

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1703  CAGCACGAGTAGATGGTAAACATTTAAAGGGGAAAGGGGGGGTTTGTTTAAAATAGTAAATCAGTAAGTCACTT  1776

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1777  CTAAATTTAAAGAAAACAAAATTGGAGTTGAAGAATAAGTAGGTTTCCAATTGGCTATTGCCGTTTTCTTTGAA  1850

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1851  AAAATAAACATTTTTTAAAAAACTATGCATGGTTGTCCTTTTTCCTCTTCATGTAAGATTCTAACTGGGTCTAT  1924

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1925  CAGTTAATCTTTAAATTGTTAAGTAAGATAAGATTTTGACTCTTGTGTTAATGTGTTAGCAAATTAAAAGTTCT  1998

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 1999  TAAAAGGCAATCTAATGGTATTAGCCATCTTTTATTGTTAATTGTAAAAGTCTTCAGGGGAAAGCAAAAGGGGA  2072

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2073  GAATAAGGCATTTGTGTATGTAACTTGGTAAATGACGGTGGGGGATGGATCTAGCATCTGAAAGATAAGCTTCT  2146

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2147  CTACTTTGTTATAAAGTGGTTAAAAAACTATAGATGCTGCTTATTTTCTGGTGGTCATAGACAACATAGGCTTT  2220

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2221  TGTGCAAAATTGGTTGATGGCTACTAATGTTCACTTGGAGATAGCTTTTGATATTCTCAATGAAACTCATCTCA  2294

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2295  AAAAAAGGTAAGTATTAAATGTTAACATCAGCACAGATGTATTAGAACTGTTTTTTGTTTTTGAGACAGAGTCT  2368

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2369  CGCTCTGTTCTCCAGACTGGAGGGCAGTGGTGTGATCTAGGCTCACTGCAACCTCCACCCCTGGATTTGAGTGA  2442

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2443  TTCTCGTGCCTCAGTCTCCCAAGTAGCTGAGACTACAAGTGTGTGCCACCCTTGCCCGGCTAATTTTGTATTTT  2516

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2517  TAGTAGAGATGTGGTTTCTCTGTGTTACCCAGGCTGGTCCCAAAACTCCTGGCCTCAAGTGATCTGCCTGCCTT  2590

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2591  GGCCTCCCAAAGTGTTAGGATTACAGGTGTGAGCCACCATGCTCAGCCTGTAGAACTTTTAACCCAAGTCTCAT  2664

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2665  TTCTTTTTTGAAAGGGAAGAGTGCACAAGATTAACTGCTTCTTTGGATGAATCATTGTTAATAAAAAGCTGGGC  2738

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2739  ATTTAGAATTTTGCCTTATAAGCCCTTCTCCAACCATAAGATTATTTTGTACCAAAAACTTTGGTGTTCTCTAC  2812

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2813  CAAAGCAGTTAAAAACTTTTAGCCTGCTACTTCTTGTATTTGTCTACTGACAGCCCCTTGGTACTATTTAGGTT  2886

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2887  GGGGGAGGGGACCTAAAATAAATAGACTTTAACATTTCCCTTGGGTGCTAATCATAGTTGGAAGTTGAATTTAA  2960

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 2961  GGTGATTATTTGGGTGACAATTAAAAACCTAAGGAAAACCAGAAATCTTGGTAGTGGAAGAAATGTGTAAGGTC  3034

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3035  ACCCCAATCGGTAGATTTTAATGAACGTTGTGGAATGTTGGGAAGAGGGGATGTTAAGTTGAATGCAGAATTTC  3108

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3109  ACTAAGTACTTAGTGTAAGTTTAAGGATGTAGCTCTTTTTATCTAAGAATTCAATGTAATGGCCAAAAGGCAGA  3182

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3183  TTTACTGTTTAAAAATTTGAATAATTTTACATGACATTCTTGAAATTCTAAGAAGTTTTATGTGTAGAACATTT  3256

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3257  TAAAAATTCATCAGATTATTAAAGGGAAAATAAATGATTAATGATAATTTTGGAAGGTTAATGTGAGCTAGACT  3330

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3331  TAAGTAAACTTTGGTTCATTTGTGTTCATTGAATGTTTTGGAAATGACCAAAAAATGTAAATGGCCTTCACTCA  3404

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3405  AGTTTGAGTGTTTAAAGTTGAAAGATGTGCTCTACTAAAAGTTATAGTAATTCTAACCTCACATTGAAATGAGA  3478

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3479  CAGTATTCCTTGTTATACAGGCTGAATTTGAAGATTAGAGAGGATCTAATGTTTACTTAGGTAAAGGGGCATAG  3552

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3553  GTTTTGTAGTTAAGATGACCAGACAGCTAAAAGCTGTGATGGGAAGTATGGACTGCTCCTATTTATAGTCTCAG  3626

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3627  AAAATGGACCTTTAGGTCTCTATCCGTATTGGCAATTATTAGAAGAAAGTTACACCCTTTTGAAACTACAAAAG  3700

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3701  CTGTCTTGGAATTTCCCCCTCTTCTCCCTATTTATGTCCCCTTAGAATATTTTAGGGAGCCTATAATTATTTTC  3774

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3775  TAACCAAGGAAAAACTTAAGTCTCTTTAAGAAGCAATTACTTTTCATAACATCAGATTGAATAACCCACCTTGC  3848

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3849  TGTTCAGCCCACATCCTACTGGAAACAAAAGGTAAGAAACCCATTTTCTGGTTCTTGATTGTTTGGGTCTGAAT  3922

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3923  TTTGTTTTTAAAACTAAGCTAAGTTTAATGTTTTTTAAAATGCTGTTTGGAATATGAATAGATTCCCCGTAAAA  3996

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 3997  TGATTTTTCCTAAGTTTTATGCTTTAGTAAATATTCAGTGCTCACGTCTGTGCATCATAGTGCTTGCGTTTAAT  4070

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 4071  ATGATTTATTGTAGAATCTCAACTTTTCTTGGTGTTTGTTGTCTTTGAAACATTGTCTTGGTCATTAGGGCTGG  4144

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 4145  TGTTTTCACATTTCTGTGGTCAAGGTGGATTTCTTATGTGTGCCTTTTTGCTTACTTTGTATATGAATTTTGTA  4218

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 4219  ATTTAAATTGCAAGTAAGTTATATATATGTATTTACCATAAATAGTATTAAAAGATGAGAAACTGTTAGACTGA  4292

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 4293  AGTTCTGTTGTAACATAACCATTATTTCCATCACAGTATGAAGACTGCAAACGCAGAAAACAGATTACAGTCTC  4366

Query  745  --------------------------------------------------------------------------  744
                                                                                      
Sbjct 4367  TTATCCATTTTTTGAAATCCAAAAACTACGAAAACAAAAGATTTTCTGTTGTTGAGCTAATTAAATGTGAACCC  4440

Query  745  ---------  744
                     
Sbjct 4441  TGACCAGAA  4449

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