Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01524
- Subject:
- XR_001750509.1
- Aligned Length:
- 2577
- Identities:
- 816
- Gaps:
- 1761
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCAGTTGTGGAGTGGCGTAGACGAGTTAAGTCCTGGTCTGCGTGGAGGTCGACGACTCCGTCGCAGACTACGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGTCTGGGTCTCAGCCGCCAAAGACCCCGTCCGGTAGGTGAGTGGCTCACTTTGAGGGCAAGCCTTCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGAGGCTTCTTCATGGCCGCTCAGATCGTGAGCGGCCGGGGCTGCTCTCTTTGCGGAGGATGGCGTCTAATG 222
Query 1 ------------------------------------ATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCGCAGTTGATTCGAGGAAGTACTAGCCGGACATCATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCC 296
Query 39 AGCGGCCAGGGAGAAGGACGTGGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAG 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCGGCCAGGGAGAAGGACGTGGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAG 370
Query 113 GCTTTGGTTTTGTGGAATTTGAGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTC 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCTTTGGTTTTGTGGAATTTGAGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTC 444
Query 187 TGTAGTGAAAGGGTTACTATTGAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGA 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGTAGTGAAAGGGTTACTATTGAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGA 518
Query 261 CCGTTTTAGTAGTCGCAGACCTCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAG 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCGTTTTAGTAGTCGCAGACCTCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAG 592
Query 335 TTGAGAATTTATCCTCAAGAGTCAGCTGGC-------------------------------------------- 364
||||||||||||||||||||||||||||||
Sbjct 593 TTGAGAATTTATCCTCAAGAGTCAGCTGGCAGCCTGTCTGTGTCGTTGGCCTTATGACGAGGAGTGCCTGTGGG 666
Query 365 -------------------------------------------------------------------------- 364
Sbjct 667 TTATCCTAATCGTTGTCTTGGTCACTCTTGGTTGGGCCTGGTTGACTTTGCCAGTCAGCTCCTACAGTGATCAG 740
Query 365 -------------------------------------------------------------------------- 364
Sbjct 741 TTGGCCACCTCTAGATCTGTGTTTGCCGGTCTAGACGTTATCGGTGCACTTCCTTGAAGTGCCAGGTTGCAGCG 814
Query 365 -------------------------------------------------------------------------- 364
Sbjct 815 ATCCCAGAGCGTTGATAACGTGATCTGATCCCTAAGTTGAGACCTGTCTTCCTGTAACGCTTCCGAATAAGAGG 888
Query 365 -------------------------------------------------------------------------- 364
Sbjct 889 TCCGGTCGAAAAGAGTTGAAAGATACGAAATTAGGTGGTCGTTGGAATCCTGATCGCAGTAAAGTGGTCCTTGG 962
Query 365 -------------------------------------------------------------------------- 364
Sbjct 963 TAACTGCTCGAGTAGAACATGTCTGCATCCGCCAATAGTCCGCTAATAGGGAGGGCTGTGCGATTAAAGGCTTC 1036
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1037 CATCGATTGGGTAGTGTCCTTCAAGTGGGTGGCGAAGAGCCAGTCGGGCATATGTCATGAAGGTTTCTCCGACC 1110
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1111 GATTAATGGTTTGCTGCTTGACTAGCCTAGGGAAATAATAATAAAGGTAAAGTAAACTTTTTTAATGACATATG 1184
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1185 GGGCACAAAATAACTGGTGTCTTGTAAATGTTCTGTTTTTTTAAATAAAACTTCTCTACTTTAGTCTTTACTTT 1258
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1259 AAAAATATGTACTGTTTCCTTTTTTGTTGTTTTTTTGTTTGTTTTTTTTTCTTTTGTACTGAGCTCAGCATAGA 1332
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1333 CTAATACTACCTTAATGTTAAAATCTGAATTTCTTTTAGCATTTTGCTTAAAAGCAATATGCTATTTGCTTATT 1406
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1407 CCGTGCCCTGACATAGATAATTTTTGAATTCTGATAGAATACAAGTGTGGTAAATGCCATGTTTGTACTTTATC 1480
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1481 TAACATCTTCTCTTTCAGTAGTCTTGTTTTTTTTATATCATGTGATTGTTTGTGTGTCCCCTTTCCTCTTCTTT 1554
Query 365 ------------------------AGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGAT 414
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCTTAACACAATTATCTTGTGTTAAGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGAT 1628
Query 415 GCACACCGACCTAAATTAAATGAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAA 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCACACCGACCTAAATTAAATGAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAA 1702
Query 489 ACTTTCTGGAAAGGAAATAAATGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACTTTCTGGAAAGGAAATAAATGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAA 1776
Query 563 GCAGGTCTCGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTAC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCAGGTCTCGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTAC 1850
Query 637 AGCCGGTCAAGAAGCAGGAGCAGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGA 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGCCGGTCAAGAAGCAGGAGCAGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGA 1924
Query 711 GAAGAGCCAGAAACGTGGTTCTTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCC 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GAAGAGCCAGAAACGTGGTTCTTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCC 1998
Query 785 GATCAAGGTCCAGATCAGTTGACAGTGGCAAT------------------------------------------ 816
||||||||||||||||||||||||||||||||
Sbjct 1999 GATCAAGGTCCAGATCAGTTGACAGTGGCAATTAAACTGTAAATAACTTGCCCTGGGGGCCTTTTTTTAAAAAA 2072
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2073 CAAAAACCACAAAAATTCCCAAACCATACTTGCTAAAAATTCTGGTAAGTATGTGCTTTTCTGTGGGGGTGGGA 2146
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2147 TTTGGAAGGGGGGTTGGGTTGGGCTGGATATCTTTGTAGATGTGGACCACCAAGGGGTTGTTGAAAACTAATTG 2220
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2221 TATTAAATGTCTTTTGATAAGCCTTCTGCTCACATTTTTGTGAATGTCTGAAGTATATAGTTTGTGTATATTGA 2294
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2295 CAGAGCTCTTTTATAACTAAAGCAAATTTAATTTTTTTGTACTAGAAAAAAATTTGAACATTTTAGTTCTTGGT 2368
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2369 TATAAAAATGTTAATTCAGAATTAGTTTAATGCCTTAATTAAACTAATTAATAGCTTTGGACACTTAAAAGAGC 2442
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2443 TCTAAATTTGCTTGTACATAAAGGCTTAATTTGTTTTCCTTGTTAGGGTCAAGGGTGTCCTCCACTCTTTAACA 2516
Query 817 ------------------------------------------------------------- 816
Sbjct 2517 GCTGCTGGACAGACACATTAGAGCAGCTGTTTGTTATTGATAATAAAATATTATAAAACTA 2577
