Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01524
- Subject:
- XR_001750510.2
- Aligned Length:
- 2482
- Identities:
- 813
- Gaps:
- 1669
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTGTGGAGCGCCAGAGCTGCTAAGTGCGTCAGTTGTGGAGTGGCGTAGACGAGTTAAGTCCTGGTCTGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGTCGACGACTCCGTCGCAGACTACGGACCTGTCTGGGTCTCAGCCGCCAAAGACCCCGTCCGGTAGGAAG 148
Query 1 ---------------ATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TACTAGCCGGACATCATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGT 222
Query 60 GGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTG 296
Query 134 AGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATT 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATT 370
Query 208 GAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACC 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACC 444
Query 282 TCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAG 518
Query 356 TCAGCTGGC----------------------------------------------------------------- 364
|||||||||
Sbjct 519 TCAGCTGGCAGCCTGTCTGTGTCGTTGGCCTTATGACGAGGAGTGCCTGTGGGTTATCCTAATCGTTGTCTTGG 592
Query 365 -------------------------------------------------------------------------- 364
Sbjct 593 TCACTCTTGGTTGGGCCTGGTTGACTTTGCCAGTCAGCTCCTACAGTGATCAGTTGGCCACCTCTAGATCTGTG 666
Query 365 -------------------------------------------------------------------------- 364
Sbjct 667 TTTGCCGGTCTAGACGTTATCGGTGCACTTCCTTGAAGTGCCAGGTTGCAGCGATCCCAGAGCGTTGATAACGT 740
Query 365 -------------------------------------------------------------------------- 364
Sbjct 741 GATCTGATCCCTAAGTTGAGACCTGTCTTCCTGTAACGCTTCCGAATAAGAGGTCCGGTCGAAAAGAGTTGAAA 814
Query 365 -------------------------------------------------------------------------- 364
Sbjct 815 GATACGAAATTAGGTGGTCGTTGGAATCCTGATCGCAGTAAAGTGGTCCTTGGTAACTGCTCGAGTAGAACATG 888
Query 365 -------------------------------------------------------------------------- 364
Sbjct 889 TCTGCATCCGCCAATAGTCCGCTAATAGGGAGGGCTGTGCGATTAAAGGCTTCCATCGATTGGGTAGTGTCCTT 962
Query 365 -------------------------------------------------------------------------- 364
Sbjct 963 CAAGTGGGTGGCGAAGAGCCAGTCGGGCATATGTCATGAAGGTTTCTCCGACCGATTAATGGTTTGCTGCTTGA 1036
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1037 CTAGCCTAGGGAAATAATAATAAAGGTAAAGTAAACTTTTTTAATGACATATGGGGCACAAAATAACTGGTGTC 1110
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1111 TTGTAAATGTTCTGTTTTTTTAAATAAAACTTCTCTACTTTAGTCTTTACTTTAAAAATATGTACTGTTTCCTT 1184
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1185 TTTTGTTGTTTTTTTGTTTGTTTTTTTTTCTTTTGTACTGAGCTCAGCATAGACTAATACTACCTTAATGTTAA 1258
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1259 AATCTGAATTTCTTTTAGCATTTTGCTTAAAAGCAATATGCTATTTGCTTATTCCGTGCCCTGACATAGATAAT 1332
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1333 TTTTGAATTCTGATAGAATACAAGTGTGGTAAATGCCATGTTTGTACTTTATCTAACATCTTCTCTTTCAGTAG 1406
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1407 TCTTGTTTTTTTTATATCATGTGATTGTTTGTGTGTCCCCTTTCCTCTTCTTTGCTTAACACAATTATCTTGTG 1480
Query 365 ---AGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATGCACACCGACCTAAATTAAAT 435
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTAAGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATGCACACCGACCTAAATTAAAT 1554
Query 436 GAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAACTTTCTGGAAAGGAAATAAA 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAACTTTCTGGAAAGGAAATAAA 1628
Query 510 TGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAAGCAGGTCTCGATCCCGGACCA 583
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1629 TGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCAC---AGGTCAAGAAGCAGGTCTCGATCCCGGACCA 1699
Query 584 GAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACAGCCGGTCAAGAAGCAGGAGC 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 GAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACAGCCGGTCAAGAAGCAGGAGC 1773
Query 658 AGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAGAAGAGCCAGAAACGTGGTTC 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 AGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAGAAGAGCCAGAAACGTGGTTC 1847
Query 732 TTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCGATCAAGGTCCAGATCAGTTG 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 TTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCGATCAAGGTCCAGATCAGTTG 1921
Query 806 ACAGTGGCAAT--------------------------------------------------------------- 816
|||||||||||
Sbjct 1922 ACAGTGGCAATTAAACTGTAAATAACTTGCCCTGGGGGCCTTTTTTTAAAAAACAAAAACCACAAAAATTCCCA 1995
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1996 AACCATACTTGCTAAAAATTCTGGTAAGTATGTGCTTTTCTGTGGGGGTGGGATTTGGAAGGGGGGTTGGGTTG 2069
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2070 GGCTGGATATCTTTGTAGATGTGGACCACCAAGGGGTTGTTGAAAACTAATTGTATTAAATGTCTTTTGATAAG 2143
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2144 CCTTCTGCTCACATTTTTGTGAATGTCTGAAGTATATAGTTTGTGTATATTGACAGAGCTCTTTTATAACTAAA 2217
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2218 GCAAATTTAATTTTTTTGTACTAGAAAAAAATTTGAACATTTTAGTTCTTGGTTATAAAAATGTTAATTCAGAA 2291
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2292 TTAGTTTAATGCCTTAATTAAACTAATTAATAGCTTTGGACACTTAAAAGAGCTCTAAATTTGCTTGTACATAA 2365
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2366 AGGCTTAATTTGTTTTCCTTGTTAGGGTCAAGGGTGTCCTCCACTCTTTAACAGCTGCTGGACAGACACATTAG 2439
Query 817 ---------------------------------------- 816
Sbjct 2440 AGCAGCTGTTTGTTATTGATAATAAAATATTATAAAACTA 2479
