Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01524
- Subject:
- XR_943506.2
- Aligned Length:
- 2478
- Identities:
- 816
- Gaps:
- 1662
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTGTGGAGCGCCAGAGCTGCTAAGTGCGTCAGTTGTGGAGTGGCGTAGACGAGTTAAGTCCTGGTCTGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGTCGACGACTCCGTCGCAGACTACGGACCTGTCTGGGTCTCAGCCGCCAAAGACCCCGTCCGGAAGTACT 148
Query 1 -----------ATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGTGGAA 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCCGGACATCATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGTGGAA 222
Query 64 AGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTGAGGA 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTGAGGA 296
Query 138 TCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATTGAAC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATTGAAC 370
Query 212 ATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACCTCGA 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACCTCGA 444
Query 286 AATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAGTCAG 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAGTCAG 518
Query 360 CTGGC--------------------------------------------------------------------- 364
|||||
Sbjct 519 CTGGCAGCCTGTCTGTGTCGTTGGCCTTATGACGAGGAGTGCCTGTGGGTTATCCTAATCGTTGTCTTGGTCAC 592
Query 365 -------------------------------------------------------------------------- 364
Sbjct 593 TCTTGGTTGGGCCTGGTTGACTTTGCCAGTCAGCTCCTACAGTGATCAGTTGGCCACCTCTAGATCTGTGTTTG 666
Query 365 -------------------------------------------------------------------------- 364
Sbjct 667 CCGGTCTAGACGTTATCGGTGCACTTCCTTGAAGTGCCAGGTTGCAGCGATCCCAGAGCGTTGATAACGTGATC 740
Query 365 -------------------------------------------------------------------------- 364
Sbjct 741 TGATCCCTAAGTTGAGACCTGTCTTCCTGTAACGCTTCCGAATAAGAGGTCCGGTCGAAAAGAGTTGAAAGATA 814
Query 365 -------------------------------------------------------------------------- 364
Sbjct 815 CGAAATTAGGTGGTCGTTGGAATCCTGATCGCAGTAAAGTGGTCCTTGGTAACTGCTCGAGTAGAACATGTCTG 888
Query 365 -------------------------------------------------------------------------- 364
Sbjct 889 CATCCGCCAATAGTCCGCTAATAGGGAGGGCTGTGCGATTAAAGGCTTCCATCGATTGGGTAGTGTCCTTCAAG 962
Query 365 -------------------------------------------------------------------------- 364
Sbjct 963 TGGGTGGCGAAGAGCCAGTCGGGCATATGTCATGAAGGTTTCTCCGACCGATTAATGGTTTGCTGCTTGACTAG 1036
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1037 CCTAGGGAAATAATAATAAAGGTAAAGTAAACTTTTTTAATGACATATGGGGCACAAAATAACTGGTGTCTTGT 1110
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1111 AAATGTTCTGTTTTTTTAAATAAAACTTCTCTACTTTAGTCTTTACTTTAAAAATATGTACTGTTTCCTTTTTT 1184
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1185 GTTGTTTTTTTGTTTGTTTTTTTTTCTTTTGTACTGAGCTCAGCATAGACTAATACTACCTTAATGTTAAAATC 1258
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1259 TGAATTTCTTTTAGCATTTTGCTTAAAAGCAATATGCTATTTGCTTATTCCGTGCCCTGACATAGATAATTTTT 1332
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1333 GAATTCTGATAGAATACAAGTGTGGTAAATGCCATGTTTGTACTTTATCTAACATCTTCTCTTTCAGTAGTCTT 1406
Query 365 -------------------------------------------------------------------------A 365
|
Sbjct 1407 GTTTTTTTTATATCATGTGATTGTTTGTGTGTCCCCTTTCCTCTTCTTTGCTTAACACAATTATCTTGTGTTAA 1480
Query 366 GGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATGCACACCGACCTAAATTAAATGAAG 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATGCACACCGACCTAAATTAAATGAAG 1554
Query 440 GGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAACTTTCTGGAAAGGAAATAAATGGG 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAACTTTCTGGAAAGGAAATAAATGGG 1628
Query 514 AGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAAGCAGGTCTCGATCCCGGACCAGAAG 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAAGCAGGTCTCGATCCCGGACCAGAAG 1702
Query 588 TTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACAGCCGGTCAAGAAGCAGGAGCAGGA 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACAGCCGGTCAAGAAGCAGGAGCAGGA 1776
Query 662 GCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAGAAGAGCCAGAAACGTGGTTCTTCA 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAGAAGAGCCAGAAACGTGGTTCTTCA 1850
Query 736 AGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCGATCAAGGTCCAGATCAGTTGACAG 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCGATCAAGGTCCAGATCAGTTGACAG 1924
Query 810 TGGCAAT------------------------------------------------------------------- 816
|||||||
Sbjct 1925 TGGCAATTAAACTGTAAATAACTTGCCCTGGGGGCCTTTTTTTAAAAAACAAAAACCACAAAAATTCCCAAACC 1998
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1999 ATACTTGCTAAAAATTCTGGTAAGTATGTGCTTTTCTGTGGGGGTGGGATTTGGAAGGGGGGTTGGGTTGGGCT 2072
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2073 GGATATCTTTGTAGATGTGGACCACCAAGGGGTTGTTGAAAACTAATTGTATTAAATGTCTTTTGATAAGCCTT 2146
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2147 CTGCTCACATTTTTGTGAATGTCTGAAGTATATAGTTTGTGTATATTGACAGAGCTCTTTTATAACTAAAGCAA 2220
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2221 ATTTAATTTTTTTGTACTAGAAAAAAATTTGAACATTTTAGTTCTTGGTTATAAAAATGTTAATTCAGAATTAG 2294
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2295 TTTAATGCCTTAATTAAACTAATTAATAGCTTTGGACACTTAAAAGAGCTCTAAATTTGCTTGTACATAAAGGC 2368
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2369 TTAATTTGTTTTCCTTGTTAGGGTCAAGGGTGTCCTCCACTCTTTAACAGCTGCTGGACAGACACATTAGAGCA 2442
Query 817 ------------------------------------ 816
Sbjct 2443 GCTGTTTGTTATTGATAATAAAATATTATAAAACTA 2478
