Nucleotide Global Alignment

Description

• Query: ccsbBroad304_01621
• Subject: XR_001751973.1
• Aligned Length: 1358
• Identities: 836
• Gaps: 473

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCCCTCCCACAGTGGACCTAGGAAACCCTCAGCTCAGAGAACAACCCTGCATTCCCCACACAACACCCACAAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGCCACTGCGGGCGAGGAGGGCACGAGGCCAGGTTCCCAAGAGCTCAGCAGCTCTGGCCCCTAGTAGCAGCTC  148

Query    1  -------------------------------------------------------ATGGAGCTGATCCAGGACA  19
                                                                   |||||||||||||||||||
Sbjct  149  AGTTCCTCAATGGGCCGTGTTTGTCCTGGAGCCCAGATGGACTGTGGCCAGGAACATGGAGCTGATCCAGGACA  222

Query   20  CCTCCCGCCCGCCACTGGAGTACGTGAAGGGGGTCCCGCTCATCAAGTACTTTGCAGAGGCACTGGGGCCCCTG  93
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTCCCGCCCGCCACTGGAGTACGTGAAGGGGGTCCCGCTCATCAAGTACTTTGCAGAGGCACTGGGGCCCCTG  296

Query   94  CAGAGCTTCCAAGCCCGACCTGATGACCTGCTCATCAACACCTACCCCAAGTCTGGCACCACCTGGGTGAGCCA  167
            |||||||||||.|||||.|||||||||||||||||||.|||||||||||||||.|||||.||||||||.|||||
Sbjct  297  CAGAGCTTCCAGGCCCGGCCTGATGACCTGCTCATCAGCACCTACCCCAAGTCCGGCACTACCTGGGTAAGCCA  370

Query  168  GATACTGGACATGATCTACCAGGGCGGCGACCTAGAGAAGTGTAACCGGGCTCCCATCTACGTACGGGTGCCCT  241
            |||.||||||||||||||||||||.||.|||||.|||||||||.||||.||||||||||.|.|.||||||||||
Sbjct  371  GATTCTGGACATGATCTACCAGGGTGGTGACCTGGAGAAGTGTCACCGAGCTCCCATCTTCATGCGGGTGCCCT  444

Query  242  TCCTTGAGGTCAATGATCCAGGGGAACCCTCAGGGCTGGAGACTCTGAAAGACACACCGCCCCCACGGCTCATC  315
            ||||||||.||||.|..||||||...|||||||||.|||||||||||||||||||||||.|||||||.|||.|.
Sbjct  445  TCCTTGAGTTCAAAGCCCCAGGGATTCCCTCAGGGATGGAGACTCTGAAAGACACACCGGCCCCACGACTCCTG  518

Query  316  AAGTCACACCTGCCCCTGGCTCTGCTCCCTCAGACTCTGTTGGATCAGAAGGTCAAGGTGGTCTATGTTGCCCG  389
            |||.|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAGACACACCTGCCCCTGGCTCTGCTCCCCCAGACTCTGTTGGATCAGAAGGTCAAGGTGGTCTATGTTGCCCG  592

Query  390  AAACCCAAAGGACGTGGCGGTCTCCTACTACCATTTCCACCGTATGGAAAAGGCGCACCCTGAGCCTGGGACCT  463
            .|||.|||||||.|||||.||.|||||||||||.|||.|||..||||..||||.||||||||||||||||||||
Sbjct  593  CAACGCAAAGGATGTGGCAGTTTCCTACTACCACTTCTACCACATGGCCAAGGTGCACCCTGAGCCTGGGACCT  666

Query  464  GGGACAGCTTCCTGGAAAAGTTCATGGCTGGAGAAGTGTCCTACGGGTCCTGGTACCAGCACGTGCAGGAGTGG  537
            ||||||||||||||||.||||||||||..|||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  667  GGGACAGCTTCCTGGAGAAGTTCATGGTCGGAGAAGTGTCCTACGGATCCTGGTACCAGCACGTGCAGGAGTGG  740

Query  538  TGGGAGCTGAGCCGCACCCACCCTGTTCTCTACCTCTTCTATGAAGACATGAAGG-------------------  592
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct  741  TGGGAGCTGAGCCGCACCCACCCTGTTCTCTACCTCTTCTATGAAGACATGAAGGAGTAATCCGAGCCTCCACT  814

Query  593  -------------------AGAACCCCAAAAGGGAGATTCAAAAGATCCTGGAGTTTGTGGGGCGCTCCCTGCC  647
                               |||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAGGGGCCCTCTGCTGCTCAGAACCCGAAAAGGGAGATTCAAAAGATCCTGGAGTTTGTGGGGCGCTCCCTGCC  888

Query  648  AGAGGAGACCATGGACTTCATGGTTCAGCACACGTCGTTCAAGGAGATGAAGAAGAACCCTATGACCAACTACA  721
            ||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGAGGAGACCGTGGACTTCGTGGTTCAGCACACGTCGTTCAAGGAGATGAAGAAGAACCCTATGACCAACTACA  962

Query  722  CCACCGTCCCCCAGGAGCTCATGGACCACAGCATCTCCCCCTTCATGAGGAAAGGCATGGCTGGGGACTGGAAG  795
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCACCGTCCCCCAGGAGTTCATGGACCACAGCATCTCCCCCTTCATGAGGAAAGGCATGGCTGGGGACTGGAAG  1036

Query  796  ACCACCTTCACCGTGGCGCAGAATGAGCGCTTCGATGCGGACTATGCGGAGAAGATGGCAGGCTGCAGCCTCAG  869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACCACCTTCACCGTGGCGCAGAATGAGCGCTTCGATGCGGACTATGCGGAGAAGATGGCAGGCTGCAGCCTCAG  1110

Query  870  CTTCCGCTCTGAGCTG----------------------------------------------------------  885
            ||||||||||||||||                                                          
Sbjct 1111  CTTCCGCTCTGAGCTGTGAGAGGGGCTCCTGGAGTCACTGCAGAGGGAGTGTGCGAATCAAACCTGACCAAGCG  1184

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1185  GCTCAAGAATAAAATATGAATTGAGGGCCCGGGACGGTAGGTCATGTCTGTAATCCCAGCAATTTGGAGGCTGA  1258

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1259  GGTGGGAGGATCATTTGAGCCCAGGAGTTCGAGACCAACCTGGGCAACATAGTGAGATTCTGTTAAAAAAATAA  1332

Query  886  --------------------------  885
                                      
Sbjct 1333  AATAAAATAAAACCAATTTTTAAAAA  1358