Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02021
- Subject:
- XR_943549.2
- Aligned Length:
- 1979
- Identities:
- 1057
- Gaps:
- 922
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAGACTGCCGTGGAACCTTCCCTACTGTAGAGGAAAGTGCTGACTTTAAGCAATTTCTGCAGTCACGCCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTTCTTTCCTTTCTCCCTCTCATTCATTCACTGACGCCGCAGCACTGATCAGCACAGACACAGAAGATGCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAAGGGACCAAAGGGAATAACCGCGGTTCTGAGGACCGTGACAAACACTCATCGTTGGGTGGGGCTCTAGTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTCCGTTGGTGCCAATATTTTATAAGCGACGTTTTCAAACTATGTGAAGATCCTTTCTTTTCTTTTCTTTCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAATCTCGCTCTGTCGCCCGGGCTGGAGTGCAGTGGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGATCTCGGCTCACTGCAACCTGCGCCTCCCAGGTTCACGCGATTCTCCTGCCTCAGTCTCCTGAGTTGCTGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTACGGGCGCCCATCACCACACCCGGCTAATTTTTTGTATCTTTAGTAGAGACGGAGTTTCAGTATGTTGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGACTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTG 592
Query 1 ------------------------------------------------ATGATGGAGAAGTATGAAAAAATTGG 26
||||||||||||||||||||||||||
Sbjct 593 AGCCACCATTCTCGGCTGAAGATCCATTTTAAGAAGATTTATTCCTCTATGATGGAGAAGTATGAAAAAATTGG 666
Query 27 GAAAATTGGAGAAGGATCCTATGGAGTTGTTTTCAAATGTAGAAACAGGGACACGGGTCAGATTGTGGCCATCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAAATTGGAGAAGGATCCTATGGAGTTGTTTTCAAATGTAGAAACAGGGACACGGGTCAGATTGTGGCCATCA 740
Query 101 AGAAGTTTCTGGAATCAGAAGATGACCCTGTCATAAAGAAAATTGCCCTTCGGGAAATCCGAATGCTCAAGCAA 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGAAGTTTCTGGAATCAGAAGATGACCCTGTCATAAAGAAAATTGCCCTTCGGGAAATCCGAATGCTCAAGCAA 814
Query 175 CTCAAGCATCCCAACCTTGTTAACCTCCTGGAAGTCTTCAGGAGGAAACGGAGGCTTCACCTGGTGTTTGAATA 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCAAGCATCCCAACCTTGTTAACCTCCTGGAAGTCTTCAGGAGGAAACGGAGGCTTCACCTGGTGTTTGAATA 888
Query 249 TTGTGACCACACAGTTCTCCATGAGTTGGACAGATACCAAAGAGGGGTACCAGAACATCTCGTGAAGAGCATAA 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGTGACCACACAGTTCTCCATGAGTTGGACAGATACCAAAGAGGGGTACCAGAACATCTCGTGAAGAGCATAA 962
Query 323 CTTGGCAGACACTGCAAGCTGTAAATTTTTGCCATAAACACAATTGCATACATAGAGACGTGAAGCCAGAAAAT 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTTGGCAGACACTGCAAGCTGTAAATTTTTGCCATAAACACAATTGCATACATAGAGACGTGAAGCCAGAAAAT 1036
Query 397 ATCCTCATCACGAAACATTCCGTGATTAAGCTTTGTGACTTTGGATTTGCTCGGCTTTTGACTGGACCGAGTGA 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCCTCATCACGAAACATTCCGTGATTAAGCTTTGTGACTTTGGATTTGCTCGGCTTTTGACTGGACCGAGTGA 1110
Query 471 CTACTATACAGACTACGTGGCTACCAGGTGGTACCGCTCCCCTGAGCTGCTGGTGGGGGACACGCAGTACGGCC 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTACTATACAGACTACGTGGCTACCAGGTGGTACCGCTCCCCTGAGCTGCTGGTGGGGGACACGCAGTACGGCC 1184
Query 545 CCCCGGTGGATGTTTGGGCAATTGGCTGTGTCTTTGCTGAGCTGCTGTCAGGAGTGCCTCTGTGGCCAGGAAAA 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCCCGGTGGATGTTTGGGCAATTGGCTGTGTCTTTGCTGAGCTGCTGTCAGGAGTGCCTCTGTGGCCAGGAAAA 1258
Query 619 TCGGATGTGGATCAGCTGTATCTGATTAGGAAGACCTTGGGGGATCTCATTCCTAGGCACCAGCAAGTGTTTAG 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCGGATGTGGATCAGCTGTATCTGATTAGGAAGACCTTGGGGGATCTCATTCCTAGGCACCAGCAAGTGTTTAG 1332
Query 693 CACGAATCAGTACTTCAGTGGAGTGAAAATTCCAGACCCTGAAGATATGGAACCACTTGAATTAAAATTCCCAA 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CACGAATCAGTACTTCAGTGGAGTGAAAATTCCAGACCCTGAAGATATGGAACCACTTGAATTAAAATTCCCAA 1406
Query 767 ACATCTCTTATCCTGCCCTGGGGCTCCTAAAGGGCTGTCTCCACATGGACCCTACTCAAAGGCTGACATGTGAA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACATCTCTTATCCTGCCCTGGGGCTCCTAAAGGGCTGTCTCCACATGGACCCTACTCAAAGGCTGACATGTGAA 1480
Query 841 CAGCTGTTGCATCACCCATATTTTGAAAACATCAGAGAAATAGAGGATTTGGCAAAAGAACACAACAAACCAAC 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGCTGTTGCATCACCCATATTTTGAAAACATCAGAGAAATAGAGGATTTGGCAAAAGAACACAACAAACCAAC 1554
Query 915 AAGGAAGACCCTAAGAAAGAGCCGAAAGCACCACTGCTTTACAGAAACATC----------------------- 965
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AAGGAAGACCCTAAGAAAGAGCCGAAAGCACCACTGCTTTACAGAAACATCCAAGGTTATAATTTGAAATGATC 1628
Query 966 -------------------------------------------------------------------------- 965
Sbjct 1629 TCCTACCTGCCACCTGGTACAGAGAGTTGGAATCTAGACTTGAGGATGGCAGTTGTGGCTTTCAGCTCCAGCAT 1702
Query 966 -------------------------------------------------------------------------- 965
Sbjct 1703 CCTCATTCCAGCACTAGGAGACAGGTCATAGGATCTATCAACCAGGGCCCCAGGGACATCTGTCTCCTGAAGCC 1776
Query 966 -------------------------------------------------------------------------- 965
Sbjct 1777 CCCTCTCCCTGAATCCTAAAGGTGCCCTTGTCCTGCTGCTTCCTGATGCCACACAGGGGCCAGGGTTTCCAGCC 1850
Query 966 --------------------CAAGTTGCAGTACCTACCCCAGCTAACTGGCAGCAGCATCCTTCCAGCTTTGGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGCATGAGCACAGGTCTCAACAAGTTGCAGTACCTACCCCAGCTAACTGGCAGCAGCATCCTTCCAGCTTTGGA 1924
Query 1020 TAATAAGAAGTACTACTGTGATACCAAGAAACTTAACTACCGTTTTCCAAACATT 1074
||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TAATAAGAAGTACTACTGTGATACCAAGAAACTTAACT----------------- 1962
