Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02030
- Subject:
- XR_001739013.2
- Aligned Length:
- 3300
- Identities:
- 1440
- Gaps:
- 1860
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAAGCCATAGCAGGAAACAGCGAGCTTGCAGCCTCACCGACGAGTCTCAACTAAAAGGGACTCCCGGAGCTAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGTGGGGACTCGGCCTCACACAGTGAGTGCCGGCTATTGGACTTTTGTCCAGTGACAGCTGAGACAACAAGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACGGGAGGAGGTGTAGGAGAGAAGCGCCGCGAACAGCGATCGCCCAGCACCAAGTCCGCTTCCAGGCTTTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTCTTTGCCTCCATCTTGGGTGCGCCTTCCCGGCGTCTAGGGGAGCGAAGGCTGAGGTGGCAGCGGCAGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTCCGGCCGCGACAGGACGAACTCCCCCACTGGAAAGGATTCTGAAAGAAATGAAGTCAGCCCTCAGAAATGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTTGACTGCCTGCTGGCTTTCTGTTGACTGGCCCGGAGCTGTACTGCAAGACCCTTGTGAGCTTCCCTAGTCT 444
Query 1 ---------ATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCT 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGAGTAGGATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCT 518
Query 66 CTTTTTGTGCCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGACCTTCTGGATATTTTACGGGAAA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTTTTGTGCCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGACCTTCTGGATATTTTACGGGAAA 592
Query 140 GAGGTAAGCTGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGTATC 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGGTAAGCTGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGTATC 666
Query 214 TTGAAGATGGACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACCTTGTTTCGGACTATAGAGTGCT 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTGAAGATGGACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACCTTGTTTCGGACTATAGAGTGCT 740
Query 288 GATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAAGGATTACATGG 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAAGGATTACATGG 814
Query 362 GCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTTGGAGAAACTAAATCTGGTTGCC 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTTGGAGAAACTAAATCTGGTTGCC 888
Query 436 CCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACCTGAAGACAAAAATCCAGAA 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACCTGAAGACAAAAATCCAGAA 962
Query 510 GTACAAGCAGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCAAGCAGCAATCCAAAAGAGTCTCA 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTACAAGCAGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCAAGCAGCAATCCAAAAGAGTCTCA 1036
Query 584 AGGATCCTTCAAATAACTTCAGGCTCCATAATGGGAGAAGTAAAGAACAAAGACTTAAGGAACAGCTTGGCGCT 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGATCCTTCAAATAACTTCAGGCTCCATAATGGGAGAAGTAAAGAACAAAGACTTAAGGAACAGCTTGGCGCT 1110
Query 658 CAACAAGAACCAGTGAAGAAATCCATTCAGGAATCAGAAGCTTTTTTGCCTCAGAGCATACCTGAAGAGAGATA 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAACAAGAACCAGTGAAGAAATCCATTCAGGAATCAGAAGCTTTTTTGCCTCAGAGCATACCTGAAGAGAGATA 1184
Query 732 CAAGATGAAGAGCAAGCCCCTAGGAATCTGCCTGATAATCGATTGCATTGGCAATGAGACAGAGCTTCTTCGAG 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAAGATGAAGAGCAAGCCCCTAGGAATCTGCCTGATAATCGATTGCATTGGCAATGAGACAGAGCTTCTTCGAG 1258
Query 806 ACACCTTCACTTCCCTGGGCTATGAAGTCCAGAAATTCTTGCATCTCAGTATGCATGGTATATCCCAGATTCTT 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACACCTTCACTTCCCTGGGCTATGAAGTCCAGAAATTCTTGCATCTCAGTATGCATGGTATATCCCAGATTCTT 1332
Query 880 GGCCAATTTGCCTGTATGCCCGAGCACCGAGACTACGACAGCTTTGTGTGTGTCCTGGTGAGCCGAGGAGGCTC 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCCAATTTGCCTGTATGCCCGAGCACCGAGACTACGACAGCTTTGTGTGTGTCCTGGTGAGCCGAGGAGGCTC 1406
Query 954 CCAGAGTGTGTATGGTGTGGATCAGACTCACTCAGGGCTCCCCCTGCATCACATCAGGAGGATGTTCATGGGAG 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCAGAGTGTGTATGGTGTGGATCAGACTCACTCAGGGCTCCCCCTGCATCACATCAGGAGGATGTTCATGGGAG 1480
Query 1028 ATTCATGCCCTTATCTAGCAGGGAAGCCAAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGGCCAGCTG 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATTCATGCCCTTATCTAGCAGGGAAGCCAAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGGCCAGCTG 1554
Query 1102 GAGGACAGCAGCCTCTTGGAGGTGGATGGGCCAGCGATGAAGAATGTGGAATTCAAGGCTCAGAAGCGAGGGCT 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAGGACAGCAGCCTCTTGGAGGTGGATGGGCCAGCGATGAAGAATGTGGAATTCAAGGCTCAGAAGCGAGGGCT 1628
Query 1176 GTGCACAGTTCACCGAGAAGCTGACTTCTTCTGGAGCCTGTGTACTGCGGACATGTCCCTGCTGGAGCAGTCTC 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GTGCACAGTTCACCGAGAAGCTGACTTCTTCTGGAGCCTGTGTACTGCGGACATGTCCCTGCTGGAGCAGTCTC 1702
Query 1250 ACAGCTCACCATCCCTGTACCTGCAGTGCCTCTCCCAGAAACTGAGACAAGAA--------------------- 1302
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACAGCTCACCATCCCTGTACCTGCAGTGCCTCTCCCAGAAACTGAGACAAGAAAGCTCCTTTACTGCCAAAGCA 1776
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1777 GGGGACAAGGACTGCTTCAGTTTCTCTGCCTTCTCTTTCTCTGAAGGGGGACAATTCCCGGAAGTGGAATTACA 1850
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1851 GAGTCAAAGGACATGCATTTTTCAAGCCTCGGATGCATCTTACTAGATGTCCTATAGGATGGTCATATCAGCTT 1924
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1925 TATAGGAGAGTAGCTGTGTCCCTGAATTCTCCCTGACACTGCATGCTCTTATATTTCCTCAAGTTTTGACAATT 1998
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1999 TGATAGGTGAAAAGTGGTATCTGACTGTTCAGATCTGGAAGGCTTTGTTATATAAACATTTTTTTAATGTTTAT 2072
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2073 TGGCAAGAATACTTTTCTAAGAGAAACATCAGTGAGCTGGTTTCCATTTAAGCTGAATGAAGCCACAATGTACC 2146
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2147 TCAAGTATAAGATTAACTGGCCTTTTTCAGTTGCACTCTAATTACAATTTAGAATGATGTTTCTGAGCCACCTG 2220
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2221 TCAAATGCATTCTGGGCTGTACCTCTGCGTACCCCAGGAATAAATCTCATGGCCTTCTTTACCTGGCCTCCTTA 2294
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2295 GTGGTGGCCCAGCAGGAAGCGGGGGTTAGAGCAGGAGCCACTCAGCCTTCCAAGATAGATACTCCATGGGCCGG 2368
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2369 TGGTATTACTGGCCTTTTGAGCCCATCCCCATTTGCATAGATGATCCACGTGGGTTATCATCTGGCTGGTATGT 2442
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2443 TCCCAGAGTGAAACTCAGCAGCCCCTTGAGGGAGGGGATGGTGGCCATCAGGCCAGAGTATTGCAAGTTAGTTT 2516
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2517 GGATCATTTGCTAAGCAGCTTGTGGTGCCTTCAGAAAGGAACAGTTTCAAAGAACTTTCACATCTGTTGGCTCA 2590
Query 1303 ---------------------------------------------------------------------AGAAA 1307
|||||
Sbjct 2591 TTTCGCCCTAATGACAGTCTTCTCTTTGATATTTGCATGGCATTAAATTTTGCCTTTCTTGTTTTCTCCAGAAA 2664
Query 1308 ACGCCCACTCCTGGATCTTCACATTGAACTCAATGGCTACATGTATGATTGGAACAGCAGAGTTTCTGCCAAGG 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ACGCCCACTCCTGGATCTTCACATTGAACTCAATGGCTACATGTATGATTGGAACAGCAGAGTTTCTGCCAAGG 2738
Query 1382 AGAAATATTATGTCTGGCTGCAGCACACTCTGAGAAAGAAACTTATCCTCTCCTACACA--------------- 1440
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AGAAATATTATGTCTGGCTGCAGCACACTCTGAGAAAGAAACTTATCCTCTCCTACACATAAGAAACCAAAAGG 2812
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2813 CTGGGCGTAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGAGGGCAGATCACTTCAGGTCAGGA 2886
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2887 GTTCGAGACCAGCCTGGCCAACATGAGTCTGAAAAGTGTCGAAGAGACAGTTTTCAGGAACAACAAGCAATTAT 2960
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2961 TCCTACTTTCCAAGTTATTTTGATGCCATGGTGGCTCATACCTATAATCTGAGTACTTTGGGAGGCTGAGGTGG 3034
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 3035 ACTGATCACTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAGCAAGACTCCATCTCTACAAAAAAAGAC 3108
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 3109 AAAATTTAGCTGAGCGTGGTGGCGTGTTCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGTGAGTGGATCCCCTG 3182
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 3183 AGCCCAGAGAGGTCAAGGTTGTGATGAGCTGTGATCACACCACTGCACTTCAGCATGGGAGACAGAGTGAGACC 3256
Query 1441 -------------------------------------------- 1440
Sbjct 3257 CTGTTTCAGAAAAAATAAATAAATAAAACCACCAGCACCACAAA 3300
