Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02030
- Subject:
- XR_002959354.1
- Aligned Length:
- 2897
- Identities:
- 1357
- Gaps:
- 1540
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAGCAGGAAACAGCGAGCTTGCAGCCTCACCGACGAGTCTCAACTAAAAGGGACTCCCGGAGCTAGGGGTGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTCGGCCTCACACAGTGAGTGCCGGCTATTGGACTTTTGTCCAGTGACAGCTGAGACAACAAGGACCACGGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGGTGTAGGAGAGAAGCGCCGCGAACAGCGATCGCCCAGCACCAAGTCCGCTTCCAGGCTTTCGGTTTCTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCTCCATCTTGGGTGCGCCTTCCCGGCGTCTAGGGGAGCGAAGGCTGAGGTGGCAGCGGCAGGAGAGTCCGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCGACAGGACGAACTCCCCCACTGGAAAGGATTCTGAAAGAAATGAAGTCAGCCCTCAGAAATGAAGTTGACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCTGCTGGCTTTCTGTTGACTGGCCCGGAGCTGTACTGCAAGACCCTTGTGAGCTTCCCTAGTCTAAGAGTAG 444
Query 1 -ATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCTCTTTTTGT 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCTCTTTTTGT 518
Query 74 GCCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGACCTTCTGGATATTTTACGGGAAAGAGGTAAG 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGACCTTCTGGATATTTTACGGGAAAGAGGTAAG 592
Query 148 CTGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGTATCTTGAAGAT 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGTATCTTGAAGAT 666
Query 222 GGACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACCTTGTTTCGGACTATAGAGTGCTGATGGCAG 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACCTTGTTTCGGACTATAGAGTGCTGATGGCAG 740
Query 296 AGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAAGGATTACATGGGCCGAGGC 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAAGGATTACATGGGCCGAGGC 814
Query 370 AAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTTGGAGAAACTAAATCTGGTTGCCCCAGATCA 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTTGGAGAAACTAAATCTGGTTGCCCCAGATCA 888
Query 444 ACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACCTGAAGACAAAAATCCAGAAGTACAAGC 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACCTGAAGACAAAAATCCAGAAGTACAAGC 962
Query 518 AGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCAAGCAGCAATCCAAAAGAGTCTCAAGGATCCT 591
|||||
Sbjct 963 AGTCT--------------------------------------------------------------------- 967
Query 592 TCAAATAACTTCAGGCTCCATAATGGGAGAAGTAAAGAACAAAGACTTAAGGAACAGCTTGGCGCTCAACAAGA 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 --------------GCTCCATAATGGGAGAAGTAAAGAACAAAGACTTAAGGAACAGCTTGGCGCTCAACAAGA 1027
Query 666 ACCAGTGAAGAAATCCATTCAGGAATCAGAAGCTTTTTTGCCTCAGAGCATACCTGAAGAGAGATACAAGATGA 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 ACCAGTGAAGAAATCCATTCAGGAATCAGAAGCTTTTTTGCCTCAGAGCATACCTGAAGAGAGATACAAGATGA 1101
Query 740 AGAGCAAGCCCCTAGGAATCTGCCTGATAATCGATTGCATTGGCAATGAGACAGAGCTTCTTCGAGACACCTTC 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 AGAGCAAGCCCCTAGGAATCTGCCTGATAATCGATTGCATTGGCAATGAGACAGAGCTTCTTCGAGACACCTTC 1175
Query 814 ACTTCCCTGGGCTATGAAGTCCAGAAATTCTTGCATCTCAGTATGCATGGTATATCCCAGATTCTTGGCCAATT 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 ACTTCCCTGGGCTATGAAGTCCAGAAATTCTTGCATCTCAGTATGCATGGTATATCCCAGATTCTTGGCCAATT 1249
Query 888 TGCCTGTATGCCCGAGCACCGAGACTACGACAGCTTTGTGTGTGTCCTGGTGAGCCGAGGAGGCTCCCAGAGTG 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 TGCCTGTATGCCCGAGCACCGAGACTACGACAGCTTTGTGTGTGTCCTGGTGAGCCGAGGAGGCTCCCAGAGTG 1323
Query 962 TGTATGGTGTGGATCAGACTCACTCAGGGCTCCCCCTGCATCACATCAGGAGGATGTTCATGGGAGATTCATGC 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 TGTATGGTGTGGATCAGACTCACTCAGGGCTCCCCCTGCATCACATCAGGAGGATGTTCATGGGAGATTCATGC 1397
Query 1036 CCTTATCTAGCAGGGAAGCCAAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGGCCAGCTGGAGGACAG 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398 CCTTATCTAGCAGGGAAGCCAAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGGCCAGCTGGAGGACAG 1471
Query 1110 CAGCCTCTTGGAGGTGGATGGGCCAGCGATGAAGAATGTGGAATTCAAGGCTCAGAAGCGAGGGCTGTGCACAG 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472 CAGCCTCTTGGAGGTGGATGGGCCAGCGATGAAGAATGTGGAATTCAAGGCTCAGAAGCGAGGGCTGTGCACAG 1545
Query 1184 TTCACCGAGAAGCTGACTTCTTCTGGAGCCTGTGTACTGCGGACATGTCCCTGCTGGAGCAGTCTCACAGCTCA 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546 TTCACCGAGAAGCTGACTTCTTCTGGAGCCTGTGTACTGCGGACATGTCCCTGCTGGAGCAGTCTCACAGCTCA 1619
Query 1258 CCATCCCTGTACCTGCAGTGCCTCTCCCAGAAACTGAGACAAGAAAGAAAACGCCCACTCCTGGATCTTCACAT 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 CCATCCCTGTACCTGCAGTGCCTCTCCCAGAAACTGAGACAAGAAAGAAAACGCCCACTCCTGGATCTTCACAT 1693
Query 1332 TGAACTCAATGGCTACATGTATGATTGGAACAGCAGAGTTTCTGCCAAGGAGAAATATTATGTCTGGCTGCAGC 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1694 TGAACTCAATGGCTACATGTATGATTGGAACAGCAGAGTTTCTGCCAAGGAGAAATATTATGTCTGGCTGCAGC 1767
Query 1406 ACACTCTGAGAAAGAAACTTATCCTCTCCTACACA--------------------------------------- 1440
|||||||||||||||||||||||||||||||||||
Sbjct 1768 ACACTCTGAGAAAGAAACTTATCCTCTCCTACACATAAGAAACCAAAAGGCTGGGCGTAGTGGCTCACACCTGT 1841
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1842 AATCCCAGCACTTTGGGAGGCCAAGGAGGGCAGATCACTTCAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT 1915
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1916 GAGTCTGAAAAGTGTCGAAGAGACAGTTTTCAGGAACAACAAGCAATTATTCCTACTTTCCAAGTTATTTTGAT 1989
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1990 GCCATGGTGGCTCATACCTATAATCTGAGTACTTTGGGAGGCTGAGGTGGACTGATCACTTGAGCCCAGGAGTT 2063
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2064 TGAGACCAGCCTGGGCAACATAGCAAGACTCCATCTCTACAAAAAAAGACAAAATTTAGCTGAGCGTGGTGGCG 2137
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2138 TGTTCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGTGAGTGGATCCCCTGAGCCCAGAGAGGTCAAGGTTGTGA 2211
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2212 TGAGCTGTGATCACACCACTGCACTTCAGCATGGGAGACAGAGTGAGACCCTGTTTCAGAAAAAATAAATAAAT 2285
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2286 AAAACCACCAGCACCACAAACAACAACAAAAAGTTATTTTGTACTTGTTTTGAGCACAGGACTCCTGAGGGTAT 2359
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2360 CTTTGCATTTAATATTACATAGGGGTGCCAGTGGGAAGTAATGTGTATGCTTGGCCTCATGAGCTAAAACCCTG 2433
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2434 TGTTAATTATGACAGAAGGAAAGTGTGTGAGAGAGATCTTAACTACCTAGCAGCTCTAGCTGCCATCTTGAACC 2507
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2508 ATGAAGATACGGGCCACACGTAGGGGTAGCTGGGTAGTGAGCAGCAAGAAGCCTTGTTGGATGAGGGCACGAAG 2581
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2582 GAGCAGAATCACTGGAATCACTGTGTCAGCCCTAATTACCTACCTCTGGACTTTTATGTGAGGGGAAAAAAAAT 2655
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2656 TGACAGTTTATATTTATCTCAACCTAGTTAACCCAAGTGATGCATTGTTATGAGATTAAAATGTTTGGAGGCCG 2729
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2730 GGTGCGGTGGCTCACGCCTATAATCCCAGCCCTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCA 2803
Query 1441 ----------- 1440
Sbjct 2804 AGACCATCCTG 2814
