Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02087
- Subject:
- XM_006538249.2
- Aligned Length:
- 1571
- Identities:
- 762
- Gaps:
- 739
Alignment
Query 1 ATGGCTTCCTCGCGAGCCTCTTCCACGCAGGCAACCAAAACTAAAGCACCCGACGACTTAGTTGCTCCGGTCGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAAGAAACCACACATCTATTATGGAAGTTTGGAAGAGAAGGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTTTGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCTGGAAATATTAATATAACCTCTGGAGAAGTGTTTGAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 ATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATTGGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAGAGCCTTGGGGGAACCCATCACACTTTTTGGAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGGTCCTGCTGAAAGAAGAGAAAGGTTAAGAAATATCCTCTCAGTTGTCGGTACTGATGCCTTGAAAAAGACC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAAAAGGATGATGAGAAGTCTAAAAAGTCCAAAGAAGAGTATCAGCAAACCTGGTATCATGAAGGACCAAATAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTTGAAGGTGGCAAGACTATGGATTGCTAATTATTCGTTGCCCAGGGCAATGAAACGCTTGGAAGAGGCCCGAC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAAT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AATTTTTGCAGTCAGATTGGGGATGATCGGCCTATCTCCTACTGTCACTTTAGTCCCAATTCCAAGATGCTGGC 740
|||||..|
Sbjct 1 ------------------------------------------------------------------ATGCTTTC 8
Query 741 CACAGCTTGTT-----GGAGTGGGCTTTGCAAGCTCTGGTCTGTTCCTGATTGCAACCTCCTTCACACTCTTCG 809
|...| |||| ||||||||||||||||||||||||||||.|||||.||||.||||||||||||||||||
Sbjct 9 CTTTG--TGTTTGATAGGAGTGGGCTTTGCAAGCTCTGGTCTGTCCCTGACTGCAGCCTCCTTCACACTCTTCG 80
Query 810 AGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCA 883
|||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||..||.|||||||
Sbjct 81 AGGCCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCGTTGGACCAGAAGGATGTCA 154
Query 884 ACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAGTCTCGACAGTGATGAACCAGTGGCAGATATT 957
||||||||||||||||.||||||||.|||||||||||||||||.||.|||||.|||||||||||||||||||||
Sbjct 155 ACCTGGCCTCTTGTGCTGCTGATGGTTCTGTGAAGCTTTGGAGCCTTGACAGCGATGAACCAGTGGCAGATATT 228
Query 958 GAAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTTCAGGACGTTTCCTGGGCACCACCTGCTATGA 1031
||||||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.|||||.|||||
Sbjct 229 GAAGGCCATACAGTGCGTGTAGCTCGGGTAATGTGGCATCCATCAGGGCGTTTCCTGGGCACAACCTGTTATGA 302
Query 1032 CCGTTCATGGCGCTTATGGGATTTGGAGGCTCAAGAGGAGATCCTGCATCAGGAAGGCCATAGCATGGGTGTGT 1105
||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 303 CCGTTCATGGCGCTTATGGGATTTAGAGGCTCAAGAGGAGATCCTGCACCAGGAAGGCCACAGCATGGGTGTGT 376
Query 1106 ATGACATTGCCTTCCATCAAGATGGCTCTTTGGCTGGCACTGGGGGACTGGATGCATTTGGTCGAGTTTGGGAC 1179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||
Sbjct 377 ATGACATTGCCTTCCATCAAGATGGCTCTTTGGCTGGCACTGGGGGACTGGATGCATTTGGCCGGGTTTGGGAC 450
Query 1180 CTACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGAAAGAAATCTATGGAATAAATTTCTCCCCCAA 1253
||||||||||||||.||.||.||||||.|.||||||||||||||.|||||||||||.|||||||||..||||||
Sbjct 451 CTACGCACAGGACGCTGCATTATGTTCCTGGAAGGCCACCTGAAGGAAATCTATGGGATAAATTTCAGCCCCAA 524
Query 1254 TGGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAAGTGTGGGACCTCCGACAGCGGCGTTGCGTCT 1327
||||||.||||||||.||.|||||||||||||||||||||||||||||||||||.||.|||||.||.||.||||
Sbjct 525 TGGCTACCACATTGCCACTGGCAGTGGTGACAACACCTGCAAAGTGTGGGACCTTCGGCAGCGACGCTGTGTCT 598
Query 1328 ACACCATCCCTGCTCATCAGAACTTAGTGACTGGTGTCAAGTTTGAGCCTATCCATGGGAACTTCTTGCTTACT 1401
||||||||||.||.|||||||||||||||||.||||||||.||||||||||||||||||.||||||||||.||.
Sbjct 599 ACACCATCCCCGCCCATCAGAACTTAGTGACCGGTGTCAAATTTGAGCCTATCCATGGGGACTTCTTGCTCACA 672
Query 1402 GGTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGA 1475
|||||||||||.||.|||||||||||||||||.|||||||||||||||||.||||||||.||||||||.||.||
Sbjct 673 GGTGCCTATGACAATACAGCCAAGATCTGGACCCACCCAGGCTGGTCCCCACTGAAGACCCTGGCTGGTCATGA 746
Query 1476 AGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCATATGACAGGACCTTCA 1549
.|||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||.||||||||.|||||||
Sbjct 747 GGGCAAAGTGATGGGCCTGGACATTTCTTCTGATGGGCAGCTCATAGCCACGTGCTCCTATGACAGAACCTTCA 820
Query 1550 AGCTGTGGATGGCTGAA 1566
||||.||||||||.||.
Sbjct 821 AGCTCTGGATGGCAGAG 837
