Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02147
• Subject: XM_017023894.1
• Aligned Length: 1216
• Identities: 830
• Gaps: 305

Alignment

Query    1  --------------------ATGGCCGCGCCG-----GAGCCG------------------CTGC-GGCCGCGC  30
                                |.||||..|..|     ||||.|                  |||| ||..|||.
Sbjct    1  ATGTCTCCACCCCCATCTGGAGGGCCTTGGGGGCTAAGAGCAGGTGTGAGGGGTGACAGTTCTGCGGGAGGCGG  74

Query   31  CTGTGCCGCTTGGTGCGCGGAG--AGC-AGGGCTAC--GGCTTC-----CACCTGCACGGC--GAG----AA--  86
            ||||| .|.||||.||||||.|  .|| .|||||.|  ||||||     |.|.|||.|..|  |||    ||  
Sbjct   75  CTGTG-TGGTTGGGGCGCGGTGCCTGCGGGGGCTTCCGGGCTTCCCTGGCTCTTGCTCCTCTGGAGCCTCAACA  147

Query   87  ------------------GGGCCG------------------------------CCGCGGGCAGTTCA------  106
                              ||||||                              ||..||||||..||      
Sbjct  148  GGACCGTCCTGTGTTCTGGGGCCGGGACTCCTCCCTGTCCCCTCAGCCCTGGGTCCTGGGGCAGGGCAGGGCCT  221

Query  107  TCCGGC-GCGTGGAACCCGGTTCC--CCCGCC--------GA-GGCCGCCGCGCTGCGCGCTGGGGACCGCCTG  168
            |||.|| ||           ||||  ||..||        || ||..|||..||||   |.|||||..||||.|
Sbjct  222  TCCAGCAGC-----------TTCCTTCCTTCCTTTCTTGGGACGGAAGCCTAGCTG---GGTGGGGGGCGCCAG  281

Query  169  G---------TCG-AGGTCAACGG-------CGTCAACGTG-------GAGGGCGAGACGCA-CCACCAGGT--  215
            |         ||| |||..|.|||       |.|||.|.||       ||    |.|||.|| ||.|||.||  
Sbjct  282  GCTGGAGCCTTCGCAGGGGAGCGGGCTCAGTCATCACCCTGCTCCCCAGA----GTGACTCAGCCCCCACGTCC  351

Query  216  --------------GGTGCAAAGGATCAAGGCTGTGGAGG--GGCAG---ACTCGGCTG-----CTGGTGGTGG  265
                          ||.||       ||.|||.|..||||  ||.||   |.|.||.||     |||  |||.|
Sbjct  352  CCACCCATCCCCGGGGAGC-------CAGGGCCGCAGAGGGAGGTAGATAAGTGGGGTGGCAGCCTG--GGTCG  416

Query  266  ACCAGGAGACAGATGAGG--AGCTCCGCCGGCGGC--------AGCTGAC-CTGTACCGAGGAGATGGC-----  323
            .||   |||.||.|.|||  |.|.|.|||||..||        .||||.| ||||.|||..|..|||||     
Sbjct  417  GCC---AGAGAGTTCAGGCCACCCCGGCCGGACGCCTGCCACTTGCTGTCACTGTGCCGCTGTCATGGCACGCT  487

Query  324  CCAGCGAGGGCTC---CCACCCGCCCACGACCCCTGGGAGC-------CGAAGCCAGACTGGGCACACACCGGC  387
            || |.|||.|| |   |||||.|||  ||..|.|.||||||       ||.||||            ||||   
Sbjct  488  CC-GGGAGTGC-CACGCCACCTGCC--CGGGCTCCGGGAGCCCCTCCACGGAGCC------------CACC---  542

Query  388  AGCCACAGCTCCGAAGCTGGCAAGAAGGATGTCAGTGGGCCCCTGAGGGAGCTGCGCCCTCGGCTCTGCCACCT  461
              |||       ||.|||        ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  543  --CCA-------GAGGCT--------GGATGTCAGTGGGCCCCTGAGGGAGCTGCGCCCTCGGCTCTGCCACCT  599

Query  462  GCGAAAGGGACCTCAGGGCTATGGGTTCAACCTGCATAGTGACAAGTCCCGGCCCGGCCAGTACATCCGCTCTG  535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  600  GCGAAAGGGACCTCAGGGCTATGGGTTCAACCTGCATAGTGACAAGTCCCGGCCCGGCCAGTACATCCGCTCTG  673

Query  536  TGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCGGCTCATTGAGGTGAACGGGCAGAAT  609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  674  TGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCGGCTCATTGAGGTGAACGGGCAGAAT  747

Query  610  GTGGAGGGACTGCGCCATGCTGAGGTGGTGGCCAGCATCAAGGCACGGGAGGACGAGGCCCGGCTGCTGGTCGT  683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  748  GTGGAGGGACTGCGCCATGCTGAGGTGGTGGCCAGCATCAAGGCACGGGAGGACGAGGCCCGGCTGCTGGTCGT  821

Query  684  GGACCCCGAGACAGATGAACACTTCAAGCGGCTTCGGGTCACACCCACCGAGGAGCACGTGGAAGGTCCTCTGC  757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  822  GGACCCCGAGACAGATGAACACTTCAAGCGGCTTCGGGTCACACCCACCGAGGAGCACGTGGAAGGTCCTCTGC  895

Query  758  CGTCACCCGTCACCAATGGAACCAGCCCTGCCCAGCTCAATGGTGGCTCTGCGTGCTCGTCCCGAAGTGACCTG  831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  896  CGTCACCCGTCACCAATGGAACCAGCCCTGCCCAGCTCAATGGTGGCTCTGCGTGCTCGTCCCGAAGTGACCTG  969

Query  832  CCTGGTTCCGACAAGGACACTGAGGATGGCAGTGCCTGGAAGCAAGATCCCTTCCAGGAGAGCGGCCTCCACCT  905
            ||||||||||||||||||||||                                 |||||||||||||||||||
Sbjct  970  CCTGGTTCCGACAAGGACACTG---------------------------------AGGAGAGCGGCCTCCACCT  1010

Query  906  GAGCCCCACGGCGGCCGAGGCCAAGGAGAAGGCTCGAGCCATGCGAGTCAACAAGCGCGCGCCACAGATGGACT  979
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011  GAGCCCCACGGCGGCCGAGGCCAAGGAGAAGGCTCGAGCCATGCGAGTCAACAAGCGCGCGCCACAGATGGACT  1084

Query  980  GGAACAGGAAGCGTGAAATCTTCAGCAACTTC  1011
            ||||||||||||||||||||||||||||||||
Sbjct 1085  GGAACAGGAAGCGTGAAATCTTCAGCAACTTC  1116