Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02158
- Subject:
- NM_001114174.1
- Aligned Length:
- 1794
- Identities:
- 1138
- Gaps:
- 450
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTCTGCCGGTGGTGCTCCCGGGCTCCTGCTGCCCGGTGGCGGGGCTGTCGGGCGGACCTCAGGCCGGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGGCGCCGCCACCGCCGCCGCCGCTCAGGAGCCGCCGCTGCCCCCGCTGCGGCCGCGCTGGCCCCGGGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTGCAGCCTCCAGCCCGGCCCCGCTGCGCCCCCGCCGCCGTGCTGGCCCCGCCGCCGGCGCTCGCGTCCCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCCCCGCCGCGCCAGGCTCCGCGCTGCTGCCCGCGCGCCCGCTGCTGTCGCTCGGGCTCCTGCAGCTGATCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCTGCTGCATGGTGGCGCTCAGCTTCGGGGCGCTGTCGCTGAGCAGCTCGCCGCAGGTGAAGAACTCGTGCC 370
Query 1 -----------------------------------------------------------------ATGATACTC 9
||||||||.
Sbjct 371 CATTCTGGGCTGGCTCCTCGGTGATACTCTCTGGAATCATTGGATTGACGACTTGGAAAAGGCCCATGATACTG 444
Query 10 CTGGTAAACCTCTTTGTGCTGCTCTCTGTGGTTTGTGTCCTCTTAAATCTAGCTGGATTTATCCTAGGCTGCCA 83
|||||.||.||||||||||||||||||||||||||..|||||.|||||||.||.||.||.|||||||||||.||
Sbjct 445 CTGGTGAATCTCTTTGTGCTGCTCTCTGTGGTTTGCATCCTCCTAAATCTCGCAGGCTTCATCCTAGGCTGTCA 518
Query 84 AGGGGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGACTTAGGTGAAGGCAAGATTTGCTTCTGTT 157
|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 519 AGGAGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGACTTAGGTGAAGGCAAGATCTGCTTCTGTT 592
Query 158 GTGAAGAATTTCAACCAGCCAAGTGCACAGACAAAGAAAATGCCTTGAAACTCTTTCCGGTTCAGCCCTGTAGT 231
||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||.|||||.||||||
Sbjct 593 GTGAAGAATTTCAACCAGCCAAATGCACAGACAAAGAAAATGCCTTGAAACTCTTCCCGGTCCAGCCTTGTAGT 666
Query 232 GCTGTTCACCTTCTACTTAAGAAAGTCCTCTTTGCCCTGTGTGCCTTGAATGCCCTGACCACCACCGTCTGCTT 305
|||||.||||||||.||||||||||||||.||||||||||||||||||||.|||.||||||||||.||.||.||
Sbjct 667 GCTGTGCACCTTCTGCTTAAGAAAGTCCTGTTTGCCCTGTGTGCCTTGAACGCCTTGACCACCACAGTGTGTTT 740
Query 306 GGTGGCCGCTGCCCTCCGCTACCTCCAGATATTCGCAACCAGGAGATCCTGCATCGATGAATCCCAGATTTCTG 379
||||||.||||||||.||||||||||||||.||.||.|.|||.||..|.||.||.||||||||||||||.||||
Sbjct 741 GGTGGCTGCTGCCCTGCGCTACCTCCAGATCTTTGCCAGCAGAAGGCCATGTATTGATGAATCCCAGATGTCTG 814
Query 380 CTGAAGAAGCGGAGGATCATGGACGCATCCCCGACCCTGATGATTTTGTGCCGCCTGTGCCTCCCCCTTCCTAT 453
|.||.||.|.|||.||.||.||.||.||.||.|||||.|||||.||||||||.||.||||||||.|||||.||.
Sbjct 815 CAGAGGACGTGGAAGAACACGGTCGGATTCCAGACCCAGATGACTTTGTGCCACCAGTGCCTCCTCCTTCTTAC 888
Query 454 TTTGCCACGTTTTACTCGTGCACACCCCGGATGAACCGCAGGATGGTTGGTCCTGATGTTATTCCCCTGCCACA 527
||||||||.||||||||.||||||||.||||||||||||||||||||||||.|||||||.||.||.|||||.||
Sbjct 889 TTTGCCACATTTTACTCCTGCACACCTCGGATGAACCGCAGGATGGTTGGTTCTGATGTCATCCCACTGCCCCA 962
Query 528 CATCTACGGAGCTCGAATCAAAGGTGTGGAAGTGTTCTGTCCTCTGGATCCCCCGCCGCCATATGAAGCTGTGG 601
.|||||.|||||.||.|||||.||||||||||||||||||||||||||.|||||.||.|||||.||||||||.|
Sbjct 963 TATCTATGGAGCACGCATCAAGGGTGTGGAAGTGTTCTGTCCTCTGGACCCCCCACCTCCATACGAAGCTGTAG 1036
Query 602 TGAGCCAGATGGACCAGGAGCAGGGATCTTCATTCCAAATGTCAGAAGGATCAGAAGCTGCTGTGATCCCATTG 675
|||||||||..|||||||||||||..|||||||||||||||.||||||||.|||||.||||||.||.||||...
Sbjct 1037 TGAGCCAGACTGACCAGGAGCAGGAGTCTTCATTCCAAATGCCAGAAGGACCAGAAACTGCTGCGAGCCCAGCA 1110
Query 676 GATCTGGGCTGCACACAAGTGACTCAAGATGGGGACATTCCTAACATACCTGCCGAAGAAAATGCATCCACCTC 749
||.|..|..|||||.||..|.|||||||.|||||...||.||||||...|||..||||||||..||||....||
Sbjct 1111 GAGCCAGTTTGCACGCAGATAACTCAAGGTGGGGCTCTTACTAACACGACTGGTGAAGAAAACACATCTGGATC 1184
Query 750 AACTCCCAGTTC-AACCCTGGTGCGTCCTATCAGAAGCCGGAGAGCCCTCCCACCCT--TGAGGACCAGGTCGA 820
||||||.| ||| .||.|||||.|..|||...||||||||||||||.|||| |||| |||||||.||.||.|
Sbjct 1185 AACTCCTA-TTCTCACTCTGGTTCAGCCTCCGAGAAGCCGGAGAGCTCTCC--CCCTTCTGAGGACAAGATCAA 1255
Query 821 AGAGTGACCCTGTGCTCCATCCTTCTGAGGAGAGAGCTGCCCCAGTGCTCAGCTGTGAAGCTGCAACACAGACT 894
||||.|||||||||||.||.|.|||.||||||||||||.||||.|||||||||||.|||||||||||.|||||.
Sbjct 1256 AGAGCGACCCTGTGCTTCACCATTCGGAGGAGAGAGCTACCCCGGTGCTCAGCTGCGAAGCTGCAACGCAGACA 1329
Query 895 GAAAGGAGACTGGATCTGGCTGCAGTGACTCTGAGGAGAGGCTTGAGATCTAGAGCTTCGCGATGCAGACCGCG 968
||||||||.||.|||||.|||.||||||||||||||||||||..|||..|..|.||.||..||||||||||.||
Sbjct 1330 GAAAGGAGGCTAGATCTCGCTACAGTGACTCTGAGGAGAGGCGCGAGGCCACGGGCATCAAGATGCAGACCCCG 1403
Query 969 GTCTTTGATAGATTACAAATCCTACATGGACACCAAGCTGCTGGTGGCGAGGTTCCTGGAGCAGTCCTCTTGTA 1042
.|||.||||||||||||..||.|||||.|||||.||||||||.|||||.||||||||||||||||||||.||.|
Sbjct 1404 CTCTCTGATAGATTACAGGTCATACATAGACACGAAGCTGCTAGTGGCCAGGTTCCTGGAGCAGTCCTCCTGCA 1477
Query 1043 CCATGACCCCAGACATCCATGAACTTGTAGAAAACATTAAATCTGTTTTGAAATCTGATGAGGAGCACATGGAG 1116
.||||||.||.|||||.||||||||||||||.|||||.||.||||||.|||||||.|||||||.|||||||||.
Sbjct 1478 GCATGACTCCGGACATTCATGAACTTGTAGAGAACATAAAGTCTGTTCTGAAATCCGATGAGGGGCACATGGAA 1551
Query 1117 GAAGCCATCACAAGTGCCAGTTTTCTAGAACAGATAATGGCCCCATTGCAGCCCAGCACATCCAGGGCCCACAA 1190
|||||||||||.|||||||||||.|||||.||||||||||||||.|..|||||||||||||||..||||||..|
Sbjct 1552 GAAGCCATCACGAGTGCCAGTTTCCTAGAGCAGATAATGGCCCCGTCACAGCCCAGCACATCCCAGGCCCAGGA 1625
Query 1191 GCTGCCCTCGCGGAGACAGCCTGGCCTGCTGCACCTCCAGAGCTGCGGCGACCTTCACACCTTCACAC---CAG 1261
|.||..||.|.||||||||||.||||||||||||||.|..|||||.||.||.||...|||||||.|.| |||
Sbjct 1626 GTTGAGCTGGAGGAGACAGCCCGGCCTGCTGCACCTGCGCAGCTGTGGAGATCTAAGCACCTTCTCTCTGACAG 1699
Query 1262 CGGGGAGGCCCCGAGCCGAGAGGAGGCCC---CGGCGAGTGGAGGCTGAGCGGCCACACAGCCTCATTGGGGTC 1332
| .|||||..||||||||||||||||| |.|||||.||||||||||||||||||||||||.|||||.|||
Sbjct 1700 C---AAGGCCGAGAGCCGAGAGGAGGCCCCAGCAGCGAGCGGAGGCTGAGCGGCCACACAGCCTTATTGGTGTC 1770
Query 1333 ATCCGAGAGACTGTCCTG 1350
||.|||||||||||||||
Sbjct 1771 ATTCGAGAGACTGTCCTG 1788
