Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02233
• Subject: XM_011522772.3
• Aligned Length: 4389
• Identities: 2407
• Gaps: 1980

Alignment

Query    1  ATGGCCCTCTATTATGACCACCAGATAGAAGCCCCGGATGCAGCAGGGTCACCCTCATTTATCAGCTGGCACCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCCTCTATTATGACCACCAGATAGAAGCCCCGGATGCAGCAGGGTCACCCTCATTTATCAGCTGGCACCC  74

Query   75  TGTCCATCCATTCTTGGCAGTTGCTTACATCAGCACAACCTCAACAGGCAGCGTGGATATTTACCTGGAGCAAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGTCCATCCATTCTTGGCAGTTGCTTACATCAGCACAACCTCAACAGGCAGCGTGGATATTTACCTGGAGCAAG  148

Query  149  GGGAGTGCGTGCCAGATACACACGTCGAGAGGCCGTTCCGGGTTGCTTCCCTGTGCTGGCACCCGACGCGGCTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGAGTGCGTGCCAGATACACACGTCGAGAGGCCGTTCCGGGTTGCTTCCCTGTGCTGGCACCCGACGCGGCTG  222

Query  223  GTGCTGGCTGTGGGCTGGGAGACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTGCTGGCTGTGGGCTGGGAGACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCC  296

Query  297  CCTGACACACACAGCCGACATCACCGTGCTCCGTTGGAGCCCCAGTGGAAACTGCCTGCTGTCTGGGGACAGGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCTGACACACACAGCCGACATCACCGTGCTCCGTTGGAGCCCCAGTGGAAACTGCCTGCTGTCTGGGGACAGGC  370

Query  371  TTGGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACACGAGTAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTGGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACACGAGTAT  444

Query  445  GGGAAACACCTCACGCACTGCATCTTCCGGCTCCCCCCTCCTGGCGAGGACCTGGTTCAGTTGGCAAAGGCAGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGAAACACCTCACGCACTGCATCTTCCGGCTCCCCCCTCCTGGCGAGGACCTGGTTCAGTTGGCAAAGGCAGC  518

Query  519  TGTGAGCGGTGATGAGAAAGCCCTGGACATGTTTAACTGGAAGAAGAGCAGTTCTGGAAGTTTGCTGAAGATGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGTGAGCGGTGATGAGAAAGCCCTGGACATGTTTAACTGGAAGAAGAGCAGTTCTGGAAGTTTGCTGAAGATGG  592

Query  593  GGTCTCACGAGGGGCTGTTGTTCTTTGTCAGTCTGATGGACGGGACAGTGCACTATGTGGATGAGAAGGGCAAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGTCTCACGAGGGGCTGTTGTTCTTTGTCAGTCTGATGGACGGGACAGTGCACTATGTGGATGAGAAGGGCAAG  666

Query  667  ACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGTTCTACATGGAGAAGAGGGAGGCACTGGTGGT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGTTCTACATGGAGAAGAGGGAGGCACTGGTGGT  740

Query  741  GGTCACAGAGAACCTCCGGCTGTCCCTGTACACGGTGCCTCCTGAGGGCAAAGCAGAAGAAGTGATGAAGGTCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGTCACAGAGAACCTCCGGCTGTCCCTGTACACGGTGCCTCCTGAGGGCAAAGCAGAAGAAGTGATGAAGGTCA  814

Query  815  AGCTGAGCGGGAAAACCGGCCGCCGGGCAGACATCGCTTTGATTGAAGGCAGCCTTCTCGTGATGGCCGTCGGG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCTGAGCGGGAAAACCGGCCGCCGGGCAGACATCGCTTTGATTGAAGGCAGCCTTCTCGTGATGGCCGTCGGG  888

Query  889  GAGGCTGCCCTCAGATTCTGGGACATAGAACGAGGAGAGAATTATATACTGAGTCCAGATGAGAAGTTTGGCTT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAGGCTGCCCTCAGATTCTGGGACATAGAACGAGGAGAGAATTATATACTGAGTCCAGATGAGAAGTTTGGCTT  962

Query  963  TGAGAAAGGAGAGAATATGAACTGTGTGTGTTACTGTAAAGTCAAAGGTCTTCTGGCCGCTGGTACCGACAGAG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGAGAAAGGAGAGAATATGAACTGTGTGTGTTACTGTAAAGTCAAAGGTCTTCTGGCCGCTGGTACCGACAGAG  1036

Query 1037  GGCGAGTAGCCATGTGGAGGAAAGTACCAGACTTCCTGGGCAGCCCCGGGGCAGAGGGCAAGGACAGGTGGGCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGCGAGTAGCCATGTGGAGGAAAGTACCAGACTTCCTGGGCAGCCCCGGGGCAGAGGGCAAGGACAGGTGGGCC  1110

Query 1111  CTTCAGACCCCTACCGAGCTCCAAGGAAACATCACGCAAATCCAGTGGGGTTCCAGGAAGAACCTGCTGGCAGT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTTCAGACCCCTACCGAGCTCCAAGGAAACATCACGCAAATCCAGTGGGGTTCCAGGAAGAACCTGCTGGCAGT  1184

Query 1185  GAACAGCGTCATCTCCGTGGCCATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAACAGCGTCATCTCCGTGGCCATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCA  1258

Query 1259  TGCAGGTCTCCCCGAGTCTGCTGAATGTGTGCTTCCTGTCCACGGGGGTCGCACACAGCCTGCGCACCGACATG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGCAGGTCTCCCCGAGTCTGCTGAATGTGTGCTTCCTGTCCACGGGGGTCGCACACAGCCTGCGCACCGACATG  1332

Query 1333  CACATCAGTGGAGTGTTTGCCACCAAGGATGCTGTCGCAGTCTGGAACGGAAGGCAGGTGGCGATCTTCGAGCT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CACATCAGTGGAGTGTTTGCCACCAAGGATGCTGTCGCAGTCTGGAACGGAAGGCAGGTGGCGATCTTCGAGCT  1406

Query 1407  TTCTGGAGCCGCGATACGGAGTGCAGGGACCTTCTTGTGTGAGACGCCTGTGTTAGCAATGCATGAAGAAAACG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTCTGGAGCCGCGATACGGAGTGCAGGGACCTTCTTGTGTGAGACGCCTGTGTTAGCAATGCATGAAGAAAACG  1480

Query 1481  TTTACACGGTGGAGTCAAACCGAGTTCAAGTTCGAACCTGGCAGGGGACTGTCAAACAACTCCTCCTTTTCTCG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTTACACGGTGGAGTCAAACCGAGTTCAAGTTCGAACCTGGCAGGGGACTGTCAAACAACTCCTCCTTTTCTCG  1554

Query 1555  GAGACTGAGGGGAATCCCTGCTTCTTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GAGACTGAGGGGAATCCCTGCTTCTTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTT  1628

Query 1629  TAAAAGCTTTGATCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCTGCAGGAGCCTGGCGGAGCTGGTCCCTG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TAAAAGCTTTGATCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCTGCAGGAGCCTGGCGGAGCTGGTCCCTG  1702

Query 1703  GGGTGGGGGGCATCGCTTCTCTGCGGTGCAGCAGCAGCGGGAGCACCATCAGCATCCTCCCCAGCAAGGCTGAC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GGGTGGGGGGCATCGCTTCTCTGCGGTGCAGCAGCAGCGGGAGCACCATCAGCATCCTCCCCAGCAAGGCTGAC  1776

Query 1777  AACAGCCCTGATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGACTTCAAGACTGG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AACAGCCCTGATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGACTTCAAGACTGG  1850

Query 1851  ACAAATTGATCGGAGAGAGACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAGCCACCTCTTTGTGGATGAGG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  ACAAATTGATCGGAGAGAGACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAGCCACCTCTTTGTGGATGAGG  1924

Query 1925  GACTGAAAAATTATGTTCCCGTGAACCACTTCTGGGACCAGAGTGAGCCCCGGCTGTTTGTATGCGAAGCCGTG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GACTGAAAAATTATGTTCCCGTGAACCACTTCTGGGACCAGAGTGAGCCCCGGCTGTTTGTATGCGAAGCCGTG  1998

Query 1999  CAGGAGACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGCCCTGCGGCAGA  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CAGGAGACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGCCCTGCGGCAGA  2072

Query 2073  TGTTTTGATCCTGTCCTTCTTCATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCA  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TGTTTTGATCCTGTCCTTCTTCATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCA  2146

Query 2147  CCTCCCACAGTCTCCTGGGGATGGAAGTGCCTTATTACTACTTCACAAGAAAGCCCGAAGAAGCAGACAGAGAA  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CCTCCCACAGTCTCCTGGGGATGGAAGTGCCTTATTACTACTTCACAAGAAAGCCCGAAGAAGCAGACAGAGAA  2220

Query 2221  GACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTGCGAGACTTTGTGGGGCT  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTGCGAGACTTTGTGGGGCT  2294

Query 2295  GGAGGACTGCGACAAGGCCACCCGGGACGCCATGCTCCACTTCAGCTTCTTTGTCACCATAGGAGACATGGACG  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GGAGGACTGCGACAAGGCCACCCGGGACGCCATGCTCCACTTCAGCTTCTTTGTCACCATAGGAGACATGGACG  2368

Query 2369  AAGCCTTCAAATCCATCAAGCTCATCAAAAGTGAGGC---CGTCTGGGAGAACATGGCGCGCATGTGCGTGAAG  2439
            |||||||||||||||||||||||||||||||   |||   |.||.||                           
Sbjct 2369  AAGCCTTCAAATCCATCAAGCTCATCAAAAG---GGCACTCTTCAGG---------------------------  2412

Query 2440  ACCCAGCGGCTGGACGTGGCCAAGGTGTGCCTGGGGAACATGGGCCATGCCCGCGGGGCCCGAGCGCTGCGTGA  2513
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 2514  GGCGGAGCAGGAGCCGGAGCTAGAGGCCCGCGTGGCCGTGCTGGCCACGCAGCTGGGCATGCTGGAGGACGCCG  2587
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 2588  AGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTACCAGGCTGCGGGCCGGTGGCAGGAG  2661
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 2662  GCCCTCCAGGTAGCCGAGCACCACGATCGCGTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGA  2735
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 2736  GGCCAGCGCCGACTGCAGCCGGGCCCTCAGTTACTACGAGAAGTCGGACACGCACCGCTTCGAGGTGCCCAGGA  2809
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 2810  TGCTGTCGGAGGACCTGCCGTCCCTGGAGCTCTACGTGAATAAAATGAAGGATAAGACCCTGTGGCGGTGGTGG  2883
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 2884  GCGCAGTACCTGGAGAGCCAGGGCGAGATGGACGCCGCGCTGCACTACTACGAGCTGGCCCGGGACCACTTCTC  2957
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 2958  CCTGGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAAATAGCCAACGAGACAGGAAACCTGG  3031
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3032  CGGCCTCCTACCACCTCGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCAGGCGGTGCACTTCTACACCCGG  3105
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3106  GCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGGACGACCAGCTCATGAACTTGGCCCT  3179
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3180  GCTGAGCTCCCCCGAGGACATGATCGAGGCGGCCCGATACTACGAGGAGAAGGGCGTGCAGATGGACAGGGCGG  3253
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3254  TCATGCTGTACCACAAGGCTGGCCACTTCTCCAAGGCCCTGGAGCTGGCCTTTGCCACCCAGCAGTTTGTGGCC  3327
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3328  CTACAGCTCATAGCAGAGGACCTGGATGAGACGTCAGACCCTGCGCTCCTGGCCCGCTGCTCCGACTTCTTCAT  3401
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3402  CGAGCACAGTCAGTACGAGAGGGCGGTAGAGCTGCTGCTGGCTGCCAGGAAGTATCAGGAAGCCCTGCAGCTGT  3475
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3476  GCCTGGGGCAGAACATGAGCATCACCGAGGAGATGGCGGAAAAGATGACCGTGGCCAAGGACTCCTCGGACCTG  3549
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3550  CCTGAGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGCATGCGCCAGGGCAGCTACCACCTGGC  3623
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3624  CACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCATGAGGGCGCTGCTCAAATCCGGAGACACGGAGA  3697
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3698  AAATCACGTTCTTCGCGAGCGTGTCCAGGCAGAAGGAAATCTACATCATGGCTGCTAACTACCTGCAGTCCCTG  3771
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3772  GACTGGCGGAAGGAGCCGGAGATCATGAAGAACATCATCGGCTTCTACACCAAGGGGCGGGCCCTGGACCTCCT  3845
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3846  GGCTGGCTTTTATGACGCTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGC  3919
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3920  TGACCGAGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGACCAGGCTGGCGCAG  3993
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 3994  CTGCAGAGCAGGATGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTACACAGAGGACCCCAAGGAGTC  4067
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 4068  CATCAAGCAGTGTGAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACCATCCGCATCGGGGACGTCTATGGCT  4141
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 4142  TCCTGGTGGAGCACTACGTGCGGAAGGAGGAATACCAGACGGCCTACAGATTCCTGGAGGAGATGCGGCGGCGG  4215
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 4216  CTTCCCTTGGCCAACATGTCCTACTACGTGAGCCCGCAGGCCGTGGACGCCGTGCACCGGGGGCTGGGTCTCCC  4289
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 4290  ACTGCCACGCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGG  4363
                                                                                      
Sbjct 2413  --------------------------------------------------------------------------  2412

Query 4364  TGGAAGAGGCAGATGACGACCCC  4386
                                   
Sbjct 2413  -----------------------  2412