Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02292
Subject:
NM_001204113.1
Aligned Length:
598
Identities:
271
Gaps:
308

Alignment

Query   1  ATGGCAAAGCAACCTTCTGATGTAAGTTCTGAGTGTGACCGAGAAGGTAGACAATTGCAGCCTGCGGAGAGGCC  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGCAAAGCAACCTTCTGATGTAAGTTCTGAGTGTGACCGAGAAGGTAGACAATTGCAGCCTGCGGAGAGGCC  74

Query  75  TCCCCAGCTCAGACCTGGGGCCCCTACCTCCCTACAGACAGAGCCACAAGGTAATCCTGAAGGCAATCACGGAG  148
           ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct  75  TCCCCAGCTCAGACCTGGGGCCCCTACCTCCCTACAGACAGAGCCACA--------------------------  122

Query 149  GTGAAGGGGACAGCTGCCCCCACGGCAGCCCTCAGGGCCCGCTGGCCCCACCTGCCAGCCCTGGCCCTTTTGCT  222
                                                                                     
Sbjct 123  --------------------------------------------------------------------------  122

Query 223  ACCAGATCCCCGCTTTTCATCTTTATGAGAAGATCCTCCCTGCTGTCTCGATCCTCCAGTGGGTATTTCTCTTT  296
                                                                                     
Sbjct 123  --------------------------------------------------------------------------  122

Query 297  TGACACAGACAGGAGCCCAGCACCCATGAGTTGTGACAAATCAACACAAACCCCAAGTCCTCCTTGCCAGGCCT  370
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123  ------AGACAGGAGCCCAGCACCCATGAGTTGTGACAAATCAACACAAACCCCAAGTCCTCCTTGCCAGGCCT  190

Query 371  TCAACCACTATCTCAGTGCAATGGCTTCCATGAGGCAGGCTGAACCTGCAGATATGCGCCCAGAGATATGGATC  444
           ||||||||||||||||||||||||     ||||                    .|.|||         ||||||
Sbjct 191  TCAACCACTATCTCAGTGCAATGG-----ATGA--------------------CTCCGC---------TGGATC  230

Query 445  --GCCCAAGAGTTGCGGCGT--ATTGGAGACGAGTTTAACGCTTACTATGCAAGGAGGGTATTTTTGAATAATT  514
             .||..|||.||||  |.|  ||.|| ||  ||||.|..|...|||   ||||..|      ||.|.|.||| 
Sbjct 231  CTCCCTCAGAATTGC--CCTTCATAGG-GA--AGTTCAGTGGCCACT---CAAGTGG------TTAGCAAAAT-  289

Query 515  ACCAAGCAGCCGAAGACCACCCACGAATGGTTATCTTACGACTGTTACGTTACATTGTCCGCCTGGTGTGGAGA  588
             |||||                                                                   
Sbjct 290  --CAAGC-------------------------------------------------------------------  294

Query 589  ATGCAT  594
                 
Sbjct 295  ------  294