Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02324
Subject:
NM_001272049.2
Aligned Length:
2112
Identities:
1953
Gaps:
159

Alignment

Query    1  ATGGCGCGCGAGCTGCGGGCGCTGCTGCTGTGGGGCCGCCGCCTGCGGCCTTTGCTGCGGGCGCCGGCGCTGGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGCGCGAGCTGCGGGCGCTGCTGCTGTGGGGCCGCCGCCTGCGGCCTTTGCTGCGGGCGCCGGCGCTGGC  74

Query   75  GGCCGTGCCGGGAGGAAAACCAATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAG  148
            |||||||||||||                                                             
Sbjct   75  GGCCGTGCCGGGA-------------------------------------------------------------  87

Query  149  CCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATT  222
                                                                                      
Sbjct   88  --------------------------------------------------------------------------  87

Query  223  ATCAGCAGCACAGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGA  296
                                    ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   88  ------------------------GGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGA  137

Query  297  CATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTTATACGGGAGCTGATCTCCAATGCCAGCGATGCCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  138  CATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTTATACGGGAGCTGATCTCCAATGCCAGCGATGCCT  211

Query  371  TGGAAAAACTGCGTCACAAACTGGTGTCTGACGGCCAAGCACTGCCAGAAATGGAGATTCACTTGCAGACCAAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  212  TGGAAAAACTGCGTCACAAACTGGTGTCTGACGGCCAAGCACTGCCAGAAATGGAGATTCACTTGCAGACCAAT  285

Query  445  GCCGAGAAAGGCACCATCACCATCCAGGATACTGGTATCGGGATGACACAGGAAGAGCTGGTGTCCAACCTGGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  286  GCCGAGAAAGGCACCATCACCATCCAGGATACTGGTATCGGGATGACACAGGAAGAGCTGGTGTCCAACCTGGG  359

Query  519  GACGATTGCCAGATCGGGGTCAAAGGCCTTCCTGGATGCTCTGCAGAACCAGGCTGAGGCCAGCAGCAAGATCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  360  GACGATTGCCAGATCGGGGTCAAAGGCCTTCCTGGATGCTCTGCAGAACCAGGCTGAGGCCAGCAGCAAGATCA  433

Query  593  TCGGCCAGTTTGGAGTGGGTTTCTACTCAGCTTTCATGGTGGCTGACAGAGTGGAGGTCTATTCCCGCTCGGCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  434  TCGGCCAGTTTGGAGTGGGTTTCTACTCAGCTTTCATGGTGGCTGACAGAGTGGAGGTCTATTCCCGCTCGGCA  507

Query  667  GCCCCGGGGAGCCTGGGTTACCAGTGGCTTTCAGATGGTTCTGGAGTGTTTGAAATCGCCGAAGCTTCGGGAGT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  508  GCCCCGGGGAGCCTGGGTTACCAGTGGCTTTCAGATGGTTCTGGAGTGTTTGAAATCGCCGAAGCTTCGGGAGT  581

Query  741  TAGAACCGGGACAAAAATCATCATCCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCGAGGCCCGGGTGCGAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  582  TAGAACCGGGACAAAAATCATCATCCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCGAGGCCCGGGTGCGAG  655

Query  815  ATGTGGTAACGAAGTACAGCAACTTCGTCAGCTTCCCCTTGTACTTGAATGGAAGGCGGATGAACACCTTGCAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  656  ATGTGGTAACGAAGTACAGCAACTTCGTCAGCTTCCCCTTGTACTTGAATGGAAGGCGGATGAACACCTTGCAG  729

Query  889  GCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCGCGCAGGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  730  GCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCGCGCAGGC  803

Query  963  TCACGACAAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  804  TCACGACAAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGC  877

Query 1037  CCGACATGAAACCGTCCATGTTTGATGTGAGCCGGGAGCTGGGCTCCAGCGTTGCACTGTACAGCCGCAAAGTC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  878  CCGACATGAAACCGTCCATGTTTGATGTGAGCCGGGAGCTGGGCTCCAGCGTTGCACTGTACAGCCGCAAAGTC  951

Query 1111  CTCATCCAGACCAAGGCCACGGACATCCTGCCCAAGTGGCTGCGCTTCATCCGAGGTGTGGTGGACAGTGAGGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  952  CTCATCCAGACCAAGGCCACGGACATCCTGCCCAAGTGGCTGCGCTTCATCCGAGGTGTGGTGGACAGTGAGGA  1025

Query 1185  CATTCCCCTGAACCTCAGCCGGGAGCTGCTGCAGGAGAGCGCACTCATCAGGAAACTCCGGGACGTTTTACAGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  CATTCCCCTGAACCTCAGCCGGGAGCTGCTGCAGGAGAGCGCACTCATCAGGAAACTCCGGGACGTTTTACAGC  1099

Query 1259  AGAGGCTGATCAAATTCTTCATTGACCAGAGTAAAAAAGATGCTGAGAAGTATGCAAAGTTTTTTGAAGATTAC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100  AGAGGCTGATCAAATTCTTCATTGACCAGAGTAAAAAAGATGCTGAGAAGTATGCAAAGTTTTTTGAAGATTAC  1173

Query 1333  GGCCTGTTCATGCGGGAGGGCATTGTGACCGCCACCGAGCAGGAGGTCAAGGAGGACATAGCAAAGCTGCTGCG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  GGCCTGTTCATGCGGGAGGGCATTGTGACCGCCACCGAGCAGGAGGTCAAGGAGGACATAGCAAAGCTGCTGCG  1247

Query 1407  CTACGAGTCCTCGGCGCTGCCCTCCGGGCAGCTAACCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248  CTACGAGTCCTCGGCGCTGCCCTCCGGGCAGCTAACCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCA  1321

Query 1481  CCCGCAACATCTACTACCTGTGCGCCCCCAACCGTCACCTGGCAGAGCACTCACCCTACTATGAGGCCATGAAG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322  CCCGCAACATCTACTACCTGTGCGCCCCCAACCGTCACCTGGCAGAGCACTCACCCTACTATGAGGCCATGAAG  1395

Query 1555  AAGAAAGACACAGAGGTTCTCTTCTGCTTTGAGCAGTTTGATGAGCTCACCCTGCTGCACCTTCGTGAGTTTGA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396  AAGAAAGACACAGAGGTTCTCTTCTGCTTTGAGCAGTTTGATGAGCTCACCCTGCTGCACCTTCGTGAGTTTGA  1469

Query 1629  CAAGAAGAAGCTGATCTCTGTGGAGACGGACATAGTCGTGGATCACTACAAGGAGGAGAAGTTTGAGGACAGGT  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470  CAAGAAGAAGCTGATCTCTGTGGAGACGGACATAGTCGTGGATCACTACAAGGAGGAGAAGTTTGAGGACAGGT  1543

Query 1703  CCCCAGCCGCCGAGTGCCTATCAGAGAAGGAGACGGAGGAGCTCATGGCCTGGATGAGAAATGTGCTGGGGTCG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1544  CCCCAGCCGCCGAGTGCCTATCAGAGAAGGAGACGGAGGAGCTCATGGCCTGGATGAGAAATGTGCTGGGGTCG  1617

Query 1777  CGTGTCACCAACGTGAAGGTGACCCTCCGACTGGACACCCACCCTGCCATGGTCACCGTGCTGGAGATGGGGGC  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618  CGTGTCACCAACGTGAAGGTGACCCTCCGACTGGACACCCACCCTGCCATGGTCACCGTGCTGGAGATGGGGGC  1691

Query 1851  TGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGC  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692  TGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGC  1765

Query 1925  TGGAGATCAACCCCAGGCACGCGCTCATCAAGAAGCTGAATCAGCTGCGCGCAAGCGAGCCTGGCCTGGCTCAG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1766  TGGAGATCAACCCCAGGCACGCGCTCATCAAGAAGCTGAATCAGCTGCGCGCAAGCGAGCCTGGCCTGGCTCAG  1839

Query 1999  CTGCTGGTGGATCAGATATACGAGAACGCCATGATTGCTGCTGGACTTGTTGACGACCCTAGGGCCATGGTGGG  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840  CTGCTGGTGGATCAGATATACGAGAACGCCATGATTGCTGCTGGACTTGTTGACGACCCTAGGGCCATGGTGGG  1913

Query 2073  CCGCTTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGACAC  2112
            ||||||||||||||||||||||||||||||||||||||||
Sbjct 1914  CCGCTTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGACAC  1953

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