Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02397
- Subject:
- NM_001265590.2
- Aligned Length:
- 2780
- Identities:
- 654
- Gaps:
- 2092
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGCCAGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCAGAGCATCCTGCTTTTCTCTCAAAGAAAATTGGTCAAGTGGAAGAGCAAATAGATAAAGAGACCAAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAAATGGGGTATCAAGTAGGGAGGCTAAAACTGCATTGGATGCTGATGACAGATTCACTTTGCTGACAGCCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAACCACCTACTGAGTACTCTAAGGTAGAAGGCATTTATACATATTCTTTGTCTCCATCCAAAGTTTCAGGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGATGTTATTGAAAAGGATTCCCCTGAATCACCATTTGAAGTAATTATTGACAAAGCAGCATTTGACAAAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTAAAGACTCATATAAGGAGAGCACAGATGATTTTGGTAGCTGGTCTGTGCACACTGATAAAGAATCATCCGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGACATTTCAGAGACTAATGACAAGCTTTTTCCACTGAGAAATAAAGAGGCAGGACGTTACCCAATGTCTGCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTCAGTAGGCAGTTTTCACACACAAATGCAGCACTGGAAGAGGTGTCCAGATGCGTGAATGATATGCATAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTACTAACGAAATACTGACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACAAAAACTACAGGACTTGACATGAGTGAATATAATTCAGAAATTCCAGTTGTAAATCTTAAAACTAGCACTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCAGAAAACTCCTGTATGTTCTATTGATGGGAGCACTCCCATCACTAAATCAACAGGTGATTGGGCAGAAGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTCTCCAGCAAGAAAATGCTATTACTGGAAAACCTGTACCTGACTCTTTGAATTCCACAAAAGAATTCAGTAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAAGGTGTGCAAGGCAATATGCAGAAACAGGATGACACACTTGCAGAATTACCTGGATCTCCACCTGAGAAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGACTCTTTGGGTTCTGGAGTGGCCACAGTGAAAGTGGTTTTACCTGATGACCACCTGAAAGATGAAATGGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGCAGAGCTCTGCATTGGGAGAAATCACAGAAGCTGATAGTTCTGGTGAGTCTGATGACACAGTAATAGAGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATCACAGCAGATACATCATTTGAAAATAACAAAATTCAGGCTGAAAAACCTGTTTCCATTCCAAGTGCTGTTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAAAAACAGGTGAAAGAGAAATCAAAGAGATTCCCAGTTGTGAGAGAGAAGAAAAAACATCTAAAAACTTTGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAATTGGTCAGTGACTCTGAGCTGCATCAAGATCAGCCTGATATTCTTGGAAGGAGTCCAGCTAGTGAGGCAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGTTCAAAAGTACCCGATACGAATGTCTCCTTAGAAGATGTGAGTGAAGTTGCTCCTGAAAAGCCTATTACTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGAGAACCCCAAACTTCCTTCAACAGTGTCTCCAAATGTTTTTAATGAGACAGAATTCTCATTAAATGTGACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACATCTGCCTATTTGGAGTCATTACATGGGAAAAATGTTAAACATATAGATGATTCCTCCCCAGAGGACCTGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGCAGCCTTTACAGAAACCAGAGATAAAGGAATAGTAGATAGTGAAAGAAATGCTTTTAAAGCAATATCAGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGATGACAGACTTTAAAACAACTCCTCCTGTAGAAGTCTTACATGAAAATGAGTCCGGTGGTTCTGAAATTAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACATTGGAAGCAAATACAGTGAACAAAGCAAAGAAACAAATGGAAGTGAGCCTCTAGGTGTTTTCCCTACCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGGTACTCCAGTAGCATCTCTTGACTTAGAACAAGAACAGCTCACAATTAAGGCTCTTAAAGAATTAGGTGAAA 1924
Query 1 ----------------------------------------ATGGC----------------GGAGC-------- 10
||.|| |.|||
Sbjct 1925 GACAGGTTGAGAAGTCAACTTCTGCACAGCGTGACGCAGAATTGCCTTCTGAAGAAGTACTGAAGCAAACTTTC 1998
Query 11 -CGTCGGC-----------GGCCACTCAG-TCCCATTCCATCTCCTCG-TCGTCCT-TC------GGAGCCGAG 63
|.|..|| ||||||..|| ||..||..|| ||||.| .|||..| || |||.|.||.
Sbjct 1999 ACATTTGCTCCAGAATCTTGGCCACAGAGATCATATGACA--TCCTAGAACGTAATGTCAAGAATGGATCTGAT 2070
Query 64 CCGTCCGCGCCCGGCGGCGGCGGGA--GCCCAGGAGCC------------------------------TGC--- 102
| ..|||| .|||||.|||| |||
Sbjct 2071 C------------------TTGGGATTTCCCAGAAGCCCATCACTATCAGAGAAACTACTAGGGTAGATGCTGT 2126
Query 103 --CCCGCCCTGG--GGAC-GAAGAGCT------GCAGCTCCT-------CCTGTG----------CGGTGCACG 148
||.|||.|.| .||| |||..|.| |||..|||| |.|.|| |.|||||||
Sbjct 2127 TTCCAGCCTTAGCAAGACTGAATTGGTAAAAAAGCATGTCCTAGCAAGACTTCTGACAGACTTCTCAGTGCACG 2200
Query 149 ATCTGATTTTCTGGAGAGATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2201 ATCTGATTTTCTGGAGAGATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTG 2274
Query 223 GCAGCTTTCAGTGTCATCAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGAT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2275 GCAGCTTTCAGTGTCATCAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGAT 2348
Query 297 CTACAAGTCCGTCATCCAAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAAAGCCTACCTGGACGTAGACA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2349 CTACAAGTCCGTCATCCAAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAAAGCCTACCTGGACGTAGACA 2422
Query 371 TTACTCTGTCCTCAGAAGCTTTCCATAATTACATGAATGCTGCCATGGTGCACATCAACAGGGCCCTGAAACTC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2423 TTACTCTGTCCTCAGAAGCTTTCCATAATTACATGAATGCTGCCATGGTGCACATCAACAGGGCCCTGAAACTC 2496
Query 445 ATTATTCGTCTCTTTCTGGTAGAAGATCTGGTTGACTCCTTGAAGCTGGCTGTCTTCATGTGGCTGATGACCTA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2497 ATTATTCGTCTCTTTCTGGTAGAAGATCTGGTTGACTCCTTGAAGCTGGCTGTCTTCATGTGGCTGATGACCTA 2570
Query 519 TGTTGGTGCTGTTTTTAACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2571 TGTTGGTGCTGTTTTTAACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCT 2644
Query 593 ATGAGAAGTACAAGACCCAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2645 ATGAGAAGTACAAGACCCAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAG 2718
Query 667 ATCCAAGCAAAACTCCCTGGAATCGCCAAAAAAAAGGCAGAA 708
||||||||||||||||||||||||||||||||||||||||||
Sbjct 2719 ATCCAAGCAAAACTCCCTGGAATCGCCAAAAAAAAGGCAGAA 2760
