Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02397
Subject:
NR_049750.2
Aligned Length:
2529
Identities:
569
Gaps:
1960

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATT  74

Query    1  ---------------------------------------------------------------ATGGCGGAGCC  11
                                                                           |||||||||||
Sbjct   75  TCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCC  148

Query   12  GTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCG  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCG  222

Query   86  GGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGTGCACGATCTGATTTTC  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGTGCACGATCTGATTTTC  296

Query  160  TGGAGAGATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTGGCAGCTTTCAG  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGAGAGATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTGGCAGCTTTCAG  370

Query  234  TGTCATCAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGATCTACAAGTCCG  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGTCATCAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGATCTACAAGTCCG  444

Query  308  TCATCCAAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAAAGCCTACCTGGACGTAGACATTACTCTGTCC  381
            |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct  445  TCATCCAAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAA-------------------------------  487

Query  382  TCAGAAGCTTTCCATAATTACATGAATGCTGCCATGGTGCACATCAACAGGGCCCTGAAACTCATTATTCGTCT  455
                                                                                      
Sbjct  488  --------------------------------------------------------------------------  487

Query  456  CTTTCTGGTAGAAGATCTGGTTGACTCCTTGAAGCTGGCTGTCTTCATGTGGCTGATGACCTATGTTGGTGCTG  529
                                              ||||||||||||||||||||||||||||||||||||||||
Sbjct  488  ----------------------------------CTGGCTGTCTTCATGTGGCTGATGACCTATGTTGGTGCTG  527

Query  530  TTTTTAACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCTATGAGAAGTAC  603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  528  TTTTTAACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCTATGAGAAGTAC  601

Query  604  AAGACCCAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAGATCCAAGCAAA  677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  602  AAGACCCAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAGATCCAAGCAAA  675

Query  678  ACTCCCTGGAATCGCCAAAAAAAAGGCAGAA-------------------------------------------  708
            |||||||||||||||||||||||||||||||                                           
Sbjct  676  ACTCCCTGGAATCGCCAAAAAAAAGGCAGAATAAGTACATGGAAACCAGAAATGCAACAGTTACTAAAACACCA  749

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct  750  TTTAATAGTTATAACGTCGTTACTTGTACTATGAAGGAAAATACTCAGTGTCAGCTTGAGCCTGCATTCCAAGC  823

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct  824  TTTTTTTTTAATTTGGTGTTTTCTCCCATCCTTTCCCTTTAACCCTCAGTATCAAGCACAAAAATTGATGGACT  897

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct  898  GATAAAAGAACTATCTTAGAACTCAGAAGAAGAAAGAATCAAATTCATAGGATAAGTCAATACCTTAATGGTGG  971

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct  972  TAGAGCCTTTACCTGTAGCTTGAAAGGGGAAAGATTGGAGGTAAGAGAGAAAATGAAAGAACACCTCTGGGTCC  1045

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1046  TTCTGTCCAGTTTTCAGCACTAGTCTTACTCAGCTATCCATTATAGTTTTGCCCTTAAGAAGTCATGATTAACT  1119

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1120  TATGAAAAAATTATTTGGGGACAGGAGTGTGATACCTTCCTTGGTTTTTTTTTGCAGCCCTCAAATCCTATCTT  1193

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1194  CCTGCCCCACAATGTGAGCAGCTACCCCTGATACTCCTTTTCTTTAATGATTTAACTATCAACTTGATAAATAA  1267

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1268  CTTATAGGTGATAGTGATAATTCCTGATTCCAAGAATGCCATCTGATAAAAAAGAATAGAAATGGAAAGTGGGA  1341

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1342  CTGAGAGGGAGTCAGCAGGCATGCTGCGGTGGCGGTCACTCCCTCTGCCACTATCCCCAGGGAAGGAAAGGCTC  1415

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1416  CGCCATTTGGGAAAGTGGTTTCTACGTCACTGGACACCGGTTCTGAGCATTAGTTTGAGAACTCGTTCCCGAAT  1489

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1490  GTGCTTTCCTCCCTCTCCCCTGCCCACCTCAAGTTTAATAAATAAGGTTGTACTTTTCTTACTATAAAATAAAT  1563

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1564  GTCTGTAACTGCTGTGCACTGCTGTAAACTTGTTAGAGAAAAAAATAACCTGCATGTGGGCTCCTCAGTTATTG  1637

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1638  AGTTTTTGTGATCCTATCTCAGTCTGGGGGGGAACATTCTCAAGAGGTGAAATACAGAAAGCCTTTTTTTCTTG  1711

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1712  ATCTTTTCCCGAGATTCAAATCTCCGATTCCCATTTGGGGGCAAGTTTTTTTCTTCACCTTCAATATGAGAATT  1785

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1786  CAGCGAACTTGAAAGAAAAATCATCTGTGAGTTCCTTCAGGTTCTCACTCATAGTCATGATCCTTCAGAGGGAA  1859

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1860  TATGCACTGGCGAGTTTAAAGTAAGGGCTATGATATTTGATGGTCCCAAAGTACGGCAGCTGCAAAAAGTAGTG  1933

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 1934  GAAGGAAATTGTCTACGTGTCTTGGAAAAATTAGTTAGGAATTTGGATGGGTAAAAGGTACCCTTGCCTTACTC  2007

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 2008  CATCTTATTTTCTTAGCCCCCTTTGAGTGTTTTAACTGGTTTCATGTCCTAGTAGGAAGTGCATTCTCCATCCT  2081

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 2082  CATCCTCTGCCCTCCCAGGAAGTCAGTGATTGTCTTTTTGGGCTTCCCCTCCAAAGGACCTTCTGCAGTGGAAG  2155

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 2156  TGCCACATCCAGTTCTTTTCTTTTGTTGCTGCTGTGTTTAGATAATTGAAGAGATCTTTGTGCCACACAGGATT  2229

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 2230  TTTTTTTTTTTTTAAGAAAAACCTATAGATGAAAAATTACTAATGAAACTGTGTGTACGTGTCTGTGCGTGCAA  2303

Query  709  --------------------------------------------------------------------------  708
                                                                                      
Sbjct 2304  CATAAAAATACAGTAGCACCTAAGGAGCTTGAATCTTGGTTCCTGTAAAATTTCAAATTGATGTGGTATTAATA  2377

Query  709  -------------  708
                         
Sbjct 2378  AAAAAAAAAAAAA  2390

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