Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02397
- Subject:
- NR_049750.2
- Aligned Length:
- 2529
- Identities:
- 569
- Gaps:
- 1960
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATT 74
Query 1 ---------------------------------------------------------------ATGGCGGAGCC 11
|||||||||||
Sbjct 75 TCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCC 148
Query 12 GTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCG 222
Query 86 GGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGTGCACGATCTGATTTTC 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGTGCACGATCTGATTTTC 296
Query 160 TGGAGAGATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTGGCAGCTTTCAG 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGAGAGATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTGGCAGCTTTCAG 370
Query 234 TGTCATCAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGATCTACAAGTCCG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTCATCAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGATCTACAAGTCCG 444
Query 308 TCATCCAAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAAAGCCTACCTGGACGTAGACATTACTCTGTCC 381
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCATCCAAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAA------------------------------- 487
Query 382 TCAGAAGCTTTCCATAATTACATGAATGCTGCCATGGTGCACATCAACAGGGCCCTGAAACTCATTATTCGTCT 455
Sbjct 488 -------------------------------------------------------------------------- 487
Query 456 CTTTCTGGTAGAAGATCTGGTTGACTCCTTGAAGCTGGCTGTCTTCATGTGGCTGATGACCTATGTTGGTGCTG 529
||||||||||||||||||||||||||||||||||||||||
Sbjct 488 ----------------------------------CTGGCTGTCTTCATGTGGCTGATGACCTATGTTGGTGCTG 527
Query 530 TTTTTAACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCTATGAGAAGTAC 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 TTTTTAACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCTATGAGAAGTAC 601
Query 604 AAGACCCAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAGATCCAAGCAAA 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 AAGACCCAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAGATCCAAGCAAA 675
Query 678 ACTCCCTGGAATCGCCAAAAAAAAGGCAGAA------------------------------------------- 708
|||||||||||||||||||||||||||||||
Sbjct 676 ACTCCCTGGAATCGCCAAAAAAAAGGCAGAATAAGTACATGGAAACCAGAAATGCAACAGTTACTAAAACACCA 749
Query 709 -------------------------------------------------------------------------- 708
Sbjct 750 TTTAATAGTTATAACGTCGTTACTTGTACTATGAAGGAAAATACTCAGTGTCAGCTTGAGCCTGCATTCCAAGC 823
Query 709 -------------------------------------------------------------------------- 708
Sbjct 824 TTTTTTTTTAATTTGGTGTTTTCTCCCATCCTTTCCCTTTAACCCTCAGTATCAAGCACAAAAATTGATGGACT 897
Query 709 -------------------------------------------------------------------------- 708
Sbjct 898 GATAAAAGAACTATCTTAGAACTCAGAAGAAGAAAGAATCAAATTCATAGGATAAGTCAATACCTTAATGGTGG 971
Query 709 -------------------------------------------------------------------------- 708
Sbjct 972 TAGAGCCTTTACCTGTAGCTTGAAAGGGGAAAGATTGGAGGTAAGAGAGAAAATGAAAGAACACCTCTGGGTCC 1045
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1046 TTCTGTCCAGTTTTCAGCACTAGTCTTACTCAGCTATCCATTATAGTTTTGCCCTTAAGAAGTCATGATTAACT 1119
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1120 TATGAAAAAATTATTTGGGGACAGGAGTGTGATACCTTCCTTGGTTTTTTTTTGCAGCCCTCAAATCCTATCTT 1193
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1194 CCTGCCCCACAATGTGAGCAGCTACCCCTGATACTCCTTTTCTTTAATGATTTAACTATCAACTTGATAAATAA 1267
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1268 CTTATAGGTGATAGTGATAATTCCTGATTCCAAGAATGCCATCTGATAAAAAAGAATAGAAATGGAAAGTGGGA 1341
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1342 CTGAGAGGGAGTCAGCAGGCATGCTGCGGTGGCGGTCACTCCCTCTGCCACTATCCCCAGGGAAGGAAAGGCTC 1415
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1416 CGCCATTTGGGAAAGTGGTTTCTACGTCACTGGACACCGGTTCTGAGCATTAGTTTGAGAACTCGTTCCCGAAT 1489
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1490 GTGCTTTCCTCCCTCTCCCCTGCCCACCTCAAGTTTAATAAATAAGGTTGTACTTTTCTTACTATAAAATAAAT 1563
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1564 GTCTGTAACTGCTGTGCACTGCTGTAAACTTGTTAGAGAAAAAAATAACCTGCATGTGGGCTCCTCAGTTATTG 1637
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1638 AGTTTTTGTGATCCTATCTCAGTCTGGGGGGGAACATTCTCAAGAGGTGAAATACAGAAAGCCTTTTTTTCTTG 1711
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1712 ATCTTTTCCCGAGATTCAAATCTCCGATTCCCATTTGGGGGCAAGTTTTTTTCTTCACCTTCAATATGAGAATT 1785
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1786 CAGCGAACTTGAAAGAAAAATCATCTGTGAGTTCCTTCAGGTTCTCACTCATAGTCATGATCCTTCAGAGGGAA 1859
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1860 TATGCACTGGCGAGTTTAAAGTAAGGGCTATGATATTTGATGGTCCCAAAGTACGGCAGCTGCAAAAAGTAGTG 1933
Query 709 -------------------------------------------------------------------------- 708
Sbjct 1934 GAAGGAAATTGTCTACGTGTCTTGGAAAAATTAGTTAGGAATTTGGATGGGTAAAAGGTACCCTTGCCTTACTC 2007
Query 709 -------------------------------------------------------------------------- 708
Sbjct 2008 CATCTTATTTTCTTAGCCCCCTTTGAGTGTTTTAACTGGTTTCATGTCCTAGTAGGAAGTGCATTCTCCATCCT 2081
Query 709 -------------------------------------------------------------------------- 708
Sbjct 2082 CATCCTCTGCCCTCCCAGGAAGTCAGTGATTGTCTTTTTGGGCTTCCCCTCCAAAGGACCTTCTGCAGTGGAAG 2155
Query 709 -------------------------------------------------------------------------- 708
Sbjct 2156 TGCCACATCCAGTTCTTTTCTTTTGTTGCTGCTGTGTTTAGATAATTGAAGAGATCTTTGTGCCACACAGGATT 2229
Query 709 -------------------------------------------------------------------------- 708
Sbjct 2230 TTTTTTTTTTTTTAAGAAAAACCTATAGATGAAAAATTACTAATGAAACTGTGTGTACGTGTCTGTGCGTGCAA 2303
Query 709 -------------------------------------------------------------------------- 708
Sbjct 2304 CATAAAAATACAGTAGCACCTAAGGAGCTTGAATCTTGGTTCCTGTAAAATTTCAAATTGATGTGGTATTAATA 2377
Query 709 ------------- 708
Sbjct 2378 AAAAAAAAAAAAA 2390
