Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02521
Subject:
XM_006512805.3
Aligned Length:
2073
Identities:
1351
Gaps:
519

Alignment

Query    1  ATGGCCCGGCATCGGAATGTTCGAGGCTATAACTACGATGAAGATTTTGAAGATGATGATCTCTACGGCCAGTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGTAGAGGATGATTATTGTATTTCGCCGTCAACAGCTGCTCAGTTTATTTATTCACGGCGTGACAAACCTTCCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGAGCCTGTGGAAGAATATGATTATGAAGATCTGAAAGAATCTTCCAATTCTGTTTCAAACCATCAGCTCAGT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGATTTGATCAAGCTCGTCTTTATTCATGCCTTGATCACATGAGAGAGGTACTTGGAGATGCTGTGCCAGATGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AATATTAATTGAAGCAGTTCTGAAGAACAAGTTTGATGTGCAGAAGGCTTTGTCAGGGGTTCTGGAACAAGATA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GAGTGCAGAGTTTGAAGGACAAGAATGAGGCAACAGTATCTACAGGAAAGATAGCAAAAGGAAAACCAGTAGAT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TCCCAGACATCGCGAAGTGAATCTGAAATTGTGCCAAAAGTTGCTAAAATGACTGTATCTGGAAAGAAGCAAAC  518
                                                            |||||||||||.||.||||||||.||
Sbjct    1  ------------------------------------------------ATGACTGTATCCGGGAAGAAGCAGAC  26

Query  519  TATGGGATTTGAAGTGCCTGGAGTATCTTCTGAAGAAAATGGTCATAGTTTCCACACACCTCAAAAAGGACCGC  592
            .||||||||||||||||||||..||.|||||||.||||||||.|..|||.|.|.|.|.|||||.|||||.||.|
Sbjct   27  CATGGGATTTGAAGTGCCTGGCTTAACTTCTGAGGAAAATGGACTCAGTGTGCGCGCTCCTCACAAAGGGCCTC  100

Query  593  CCATTGAAGATG---CCATTGCTTCTTCCGATGTTCTTGAGACTG---CTTCTAAATCTGCTAATCCACCCCAC  660
            |...|||.||||   .|.|.||||||.|..|..|||.||||||.|   ||.|.||||||||....|||||.|..
Sbjct  101  CTGGTGATGATGTGAGCGTAGCTTCTCCTAACATTCCTGAGACCGGCACTCCAAAATCTGCCCTCCCACCTCCT  174

Query  661  ACGATTCAAGCATCAGAAGAGCAGAGTTCAACCCCAGCACCGGTGAAAAAGTCTGGCAAGCTGAGGCAGCAAAT  734
            .|..|||||.||||||||||||.|.|.||.||.||..||||.||||.||||||||||||||||||||||||.||
Sbjct  175  TCCCTTCAAACATCAGAAGAGCTGGGCTCCACTCCGACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGAT  248

Query  735  AGATGTGAAGGCGGAACTGGAGAAGCGGCAAGGAGGGAAGCAGCTACTCAACTTAGTGGTCATTGGTCATGTTG  808
            |||.|||||.||||||.||||.||||||||.||.|||||||||||.||||||||||||||||||||||||||||
Sbjct  249  AGACGTGAAAGCGGAATTGGAAAAGCGGCAGGGCGGGAAGCAGCTCCTCAACTTAGTGGTCATTGGTCATGTTG  322

Query  809  ATGCTGGGAAAAGTACTCTGATGGGCCATATGCTTTATCTTCTGGGTAATATAAACAAAAGAACTATGCATAAG  882
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  323  ATGCTGGGAAAAGTACTCTGATGGGCCATATGCTTTATCTTCTGGGTAATGTAAACAAAAGAACTATGCATAAG  396

Query  883  TATGAACAGGAGTCTAAAAAGGCTGGCAAAGCTTCGTTTGCATATGCATGGGTCTTGGATGAAACTGGCGAAGA  956
            |||||.||.||.|||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||.|||||
Sbjct  397  TATGAGCAAGAATCTAAAAAGGCTGGCAAGGCTTCATTTGCATATGCGTGGGTCTTGGATGAAACTGGAGAAGA  470

Query  957  AAGGGAAAGGGGAGTAACCATGGATGTTGGTATGACAAAGTTTGAAACCACAACCAAAGTTATTACATTAATGG  1030
            ||||||||||||||||||.|||||.||.||.|||||.|||||||||||||||||||||||||||||.|||||||
Sbjct  471  AAGGGAAAGGGGAGTAACAATGGACGTCGGAATGACGAAGTTTGAAACCACAACCAAAGTTATTACCTTAATGG  544

Query 1031  ATGCTCCAGGCCATAAGGACTTCATTCCAAATATGATTACAGGAGCAGCCCAGGCGGATGTAGCTGTTTTAGTT  1104
            |||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||.|||||.|||||..|.||.
Sbjct  545  ATGCTCCAGGCCATAAGGATTTCATTCCAAACATGATCACAGGAGCAGCCCAGGCCGATGTCGCTGTCCTGGTC  618

Query 1105  GTAGATGCCAGCAGGGGAGAGTTTGAAGCTGGATTTGAGACTGGAGGACAAACACGAGAGCATGGACTCTTGGT  1178
            ||.|||||||||||.||||||||||||||||||||||||||.||||||||.||.|||||||||||.||.|||||
Sbjct  619  GTTGATGCCAGCAGAGGAGAGTTTGAAGCTGGATTTGAGACGGGAGGACAGACCCGAGAGCATGGCCTTTTGGT  692

Query 1179  CCGTTCTCTGGGAGTGACGCAGCTTGCAGTTGCAGTTAATAAAATGGATCAGGTTAATTGGCAACAAGAAAGGT  1252
            |||.|||||.||||||||.||||||||.||.||.||.|||||.|||||||||||.|||||||||||||||||.|
Sbjct  693  CCGATCTCTTGGAGTGACACAGCTTGCTGTGGCTGTCAATAAGATGGATCAGGTAAATTGGCAACAAGAAAGAT  766

Query 1253  TTCAAGAGATTACTGGAAAACTTGGGCACTTTCTTAAGCAAGCAGGTTTTAAGGAGAGTGATGTAGGTTTTATT  1326
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||.||||||.
Sbjct  767  TTCAAGAGATTACTGGAAAACTCGGGCACTTTCTTAAGCAAGCAGGTTTTAAGGAGAGTGATGTAGCTTTTATC  840

Query 1327  CCTACAAGTGGTCTCAGTGGTGAAAATCTAATCACAAGATCTCAGTCAAGTGAACTCACAAAATGGTATAAAGG  1400
            ||.||.||.|||||.||||||||.|||.|||.|.||||.||.|||||.|||||.|||||.|..|||||.|||||
Sbjct  841  CCGACGAGCGGTCTGAGTGGTGAGAATTTAACCGCAAGGTCACAGTCCAGTGACCTCACGACGTGGTACAAAGG  914

Query 1401  ACTATGTTTATTAGAACAAATTGATTCCTTTAAGCCTCCCCAGCGATCTATTGACAAACCTTTTAGATTATGTG  1474
            ..|.||.|||||.||.||.|||||||||||.|||||.||.|||||.||.|||||||||||||||||||||||||
Sbjct  915  GATGTGCTTATTGGAGCAGATTGATTCCTTCAAGCCCCCTCAGCGCTCGATTGACAAACCTTTTAGATTATGTG  988

Query 1475  TGTCCGATGTTTTCAAAGATCAAGGATCTGGATTTTGCATAACTGGTAAAATAGAAGCTGGTTATATCCAAACT  1548
            ||||.|||||.||||||||||||||||||||.|||||..|.|||||||||||.|||||||||||||||||.|||
Sbjct  989  TGTCTGATGTCTTCAAAGATCAAGGATCTGGCTTTTGTGTGACTGGTAAAATTGAAGCTGGTTATATCCAGACT  1062

Query 1549  GGTGACCGACTACTGGCAATGCCTCCTAATGAAACTTGTACCGTGAAAGGAATCACTCTGCATGATGAACCTGT  1622
            |||||||||||..|.||.|||||.||.||||||||.|||||.|..|||||||||||||||||.|||||.|||||
Sbjct 1063  GGTGACCGACTGTTAGCCATGCCACCCAATGAAACCTGTACTGCTAAAGGAATCACTCTGCACGATGAGCCTGT  1136

Query 1623  CGACTGGGCGGCAGCAGGCGATCATGTTAGTCTTACTTTGGTTGGGATGGATATCATCAAAATCAATGTTGGCT  1696
            |||.|||||.||||||||||||||.||.|.||||||.||||||||||||||.|||||||||||||||||.||||
Sbjct 1137  CGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATGGACATCATCAAAATCAATGTCGGCT  1210

Query 1697  GCATATTTTGTGGCCCCAAAGTACCCATTAAAGCTTGCACTCGTTTCAGAGCCCGAATCCTCATCTTTAATATT  1770
            |||||||||||||||||||||.|||||||||.||||||||.||.||||||||||||||||||.||||.||||||
Sbjct 1211  GCATATTTTGTGGCCCCAAAGAACCCATTAAGGCTTGCACCCGCTTCAGAGCCCGAATCCTCGTCTTCAATATT  1284

Query 1771  GAAATTCCTATCACTAAAGGATTTCCTGTGCTGTTACACTACCAAACTGTCAGTGAACCCGCCGTTATTAAACG  1844
            |||.||||.|||||||||||.||||||||||||||||||||||||||.||||||||.||.||.||||||||.||
Sbjct 1285  GAAGTTCCGATCACTAAAGGGTTTCCTGTGCTGTTACACTACCAAACCGTCAGTGAGCCTGCTGTTATTAAGCG  1358

Query 1845  ATTGATTAGTGTCTTAAACAAAAGCACGGGTGAAGTCACAAAGAAAAAGCCTAAGTTTTTGACTAAAGGCCAGA  1918
            |||||||||||||.||||||||||.||.|||||||||||||||||.|||||.|||||..||||.||.|||||||
Sbjct 1359  ATTGATTAGTGTCCTAAACAAAAGTACTGGTGAAGTCACAAAGAAGAAGCCCAAGTTGCTGACCAAGGGCCAGA  1432

Query 1919  ATGCATTGGTAGAGCTACAGACACAAAGACCAATAGCTCTTGAGCTATATAAAGACTTTAAAGAGCTGGGGAGG  1992
            |.||.|||||||||||.|||||||||||||||.|.|||||||||||.||.||||||||.||.|||||||||.||
Sbjct 1433  ACGCCTTGGTAGAGCTGCAGACACAAAGACCAGTGGCTCTTGAGCTCTACAAAGACTTCAAGGAGCTGGGGCGG  1506

Query 1993  TTCATGCTACGTTACGGTGGTTCTACAATAGCTGCTGGTGTTGTCACTGAGATAAAAGAA--------------  2052
            ||.|||||.|||||.|||||.||.|||.|||||||.|||||||||||||||      |.|              
Sbjct 1507  TTTATGCTGCGTTATGGTGGCTCCACAGTAGCTGCCGGTGTTGTCACTGAG------GTATCTGCTGTGTCCTC  1574

Query 2053  -  2052
             
Sbjct 1575  T  1575

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