Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02581
- Subject:
- NM_006828.4
- Aligned Length:
- 6616
- Identities:
- 307
- Gaps:
- 6293
Alignment
Query 1 ATGGCTTTACCTCGTCTCACAGGAGCCTTGCGTTCCTTTTCAAATGTCACCAAGCAAGATAATTATAATGAAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTTTACCTCGTCTCACAGGAGCCTTGCGTTCCTTTTCAAATGTCACCAAGCAAGATAATTATAATGAAGA 74
Query 75 AGTGGCTGACTTAAAGATAAAGCGATCTAAACTTCATGAACAAGTTTTAGATTTGGGCCTGACATGGAAGAAGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGTGGCTGACTTAAAGATAAAGCGATCTAAACTTCATGAACAAGTTTTAGATTTGGGCCTGACATGGAAGAAGA 148
Query 149 TAATAAAATTTTTGAATGAAAAACTGGAGAAGAGTAAAATGCAAAGTATAAATGAAGACTTAAAAGATATATTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TAATAAAATTTTTGAATGAAAAACTGGAGAAGAGTAAAATGCAAAGTATAAATGAAGACTTAAAAGATATATTA 222
Query 223 CATGCTGCAAAGCAGATAG-------------------------------AAGTG-------AATTGTC----- 253
||||||||||||||||||| ||||| |.||.||
Sbjct 223 CATGCTGCAAAGCAGATAGTTGGAACTGATAATGGGAGAGAAGCAATTGAAAGTGGGGCTGCATTTCTCTTCAT 296
Query 254 --CATTCCA---GAAGAGGAGGCTG-------GATGGAAAAGAGGAGG--ATGAGA-AGATG------------ 300
||||.|| || ||||..||| .|.|||||..| ||| ||.|.| |||||
Sbjct 297 GACATTTCACTTGA--AGGACTCTGTTGGTCACAAGGAAACAA--AGGCTATCAAACAGATGTTTGGCCCCTTT 366
Query 301 -----AGCAGAGCTTCTGACAGATTCAG------AGG--ACTAA--GA-------------------------- 333
|.|| ||||.|| .|.||| |.| ||||| ||
Sbjct 367 CCTTCATCA-----TCTGCCA-CTGCAGCTTGTAATGCTACTAATCGAATTATTTCTCATTTTAGTCAAGATGA 434
Query 334 -------------------------------------------------------------------------- 333
Sbjct 435 TCTTACTGCTCTTGTGCAGATGACAGAAAAAGAACATGGCGATAGGGTTTTTTTTGGTAAAAATTTAGCATTTT 508
Query 334 -------------------------------------------------------------------------- 333
Sbjct 509 CATTTGACATGCATGATTTGGACCACTTTGACGAACTGCCAATAAATGGTGAAACTCAGAAAACTATAAGCCTA 582
Query 334 -------------------------------------------------------------------------- 333
Sbjct 583 GATTATAAGAAGTTTCTGAATGAACATCTCCAGGAGGCTTGCACCCCAGAACTCAAGCCTGTGGAAAAAACAAA 656
Query 334 -------------------------------------------------------------------------- 333
Sbjct 657 TGGCTCCTTTTTGTGGTGTGAAGTTGAAAAGTACCTAAATTCAACTTTGAAGGAAATGACTGAAGTGCCAAGAG 730
Query 334 -------------------------------------------------------------------------- 333
Sbjct 731 TAGAAGATCTTTGCTGTACTTTATATGATATGCTTGCTTCTATTAAAAGTGGTGATGAACTTCAGGATGAGCTA 804
Query 334 -------------------------------------------------------------------------- 333
Sbjct 805 TTTGAACTGCTGGGACCTGAAGGACTTGAACTTATTGAGAAACTCCTCCAGAACAGAATTACAATTGTGGATAG 878
Query 334 -------------------------------------------------------------------------- 333
Sbjct 879 ATTTCTTAATTCTTCAAATGATCATAGGTTTCAGGCTCTTCAAGACAATTGTAAAAAAATTTTAGGAGAAAATG 952
Query 334 -------------------------------------------------------------------------- 333
Sbjct 953 CTAAACCCAATTATGGTTGTCAAGTCACTATTCAGTCTGAACAAGAAAAGCAGTTAATGAAACAATATCGACGT 1026
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1027 GAAGAAAAAAGAATTGCCAGACGAGAAAAAAAGGCTGGAGAAGATTTAGAAGTTTCAGAAGGACTTATGTGCTT 1100
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1101 TGATCCTAAGGAATTGCGGATACAAAGAGAACAGGCACTTCTGAATGCTAGAAGTGTTCCAATTCTGAGCAGGC 1174
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1175 AGAGAGATGCAGACGTTGAAAAAATACATTATCCCCATGTGTATGATTCCCAGGCTGAAGCCATGAAAACATCA 1248
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1249 GCATTTATTGCTGGTGCAAAGATGATTTTGCCAGAAGGAATCCAAAGAGAGAATAACAAGCTTTATGAAGAAGT 1322
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1323 AAGGATTCCCTACAGCGAACCAATGCCACTCAGCTTTGAGGAAAAGCCAGTTTATATCCAAGACTTAGATGAGA 1396
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1397 TCGGACAGCTGGCTTTTAAAGGAATGAAGAGACTCAATAGAATCCAGTCAATAGTGTTTGAGACTGCCTACAAC 1470
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1471 ACCAATGAGAACATGCTGATTTGTGCCCCTACAGGAGCTGGAAAAACCAACATTGCAATGCTGACAGTCTTGCA 1544
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1545 TGAAATTCGCCAACATTTTCAACAAGGTGTTATCAAAAAGAATGAATTTAAGATTGTATATGTTGCTCCAATGA 1618
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1619 AAGCCTTGGCAGCTGAAATGACAGATTACTTCAGCAGACGTCTAGAGCCACTAGGCATCATTGTGAAAGAATTG 1692
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1693 ACTGGTGACATGCAGTTGTCCAAAAGTGAAATTTTACGAACTCAGATGCTTGTGACCACACCAGAAAAATGGGA 1766
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1767 TGTAGTGACAAGAAAGAGTGTTGGGGATGTAGCTCTTTCCCAGATTGTAAGGCTCCTTATTCTTGATGAAGTTC 1840
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1841 ATTTGCTGCATGAAGATAGAGGACCAGTATTAGAAAGCATAGTTGCCCGTACTTTACGGCAGGTGGAATCCACA 1914
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1915 CAGAGTATGATAAGGATTCTCGGACTGTCTGCAACTTTACCTAACTACCTCGATGTTGCCACATTTTTACATGT 1988
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1989 TAATCCATACATTGGACTTTTCTTCTTTGATGGCCGTTTTCGACCAGTACCTCTTGGACAGACATTTTTGGGGA 2062
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2063 TTAAATGTGCAAATAAGATGCAGCAGTTGAATAACATGGATGAAGTATGTTATGAAAATGTTTTGAAGCAAGTA 2136
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2137 AAGGCTGGACACCAGGTGATGGTGTTTGTACATGCTCGAAATGCCACTGTAAGAACAGCTATGTCTCTAATAGA 2210
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2211 AAGAGCAAAAAATTGTGGCCATATTCCCTTCTTTTTTCCTACCCAAGGACATGACTATGTACTTGCAGAAAAAC 2284
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2285 AGGTACAAAGGTCGAGAAATAAGCAAGTACGAGAATTATTCCCAGATGGTTTTAGTATTCATCATGCAGGAATG 2358
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2359 CTTCGGCAGGACAGAAATTTAGTTGAAAACTTGTTTTCTAATGGGCATATCAAAGTCCTAGTGTGTACAGCTAC 2432
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2433 GTTAGCCTGGGGTGTCAATCTTCCCGCCCATGCTGTTATTATTAAGGGAACACAAATATATGCTGCAAAAAGAG 2506
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2507 GCTCCTTTGTTGACCTTGGAATTTTAGATGTCATGCAGATATTTGGTCGAGCTGGACGACCACAATTTGACAAA 2580
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2581 TTTGGGGAAGGAATAATTATAACAACGCATGATAAACTCAGCCATTACCTCACTTTGCTCACTCAACGAAACCC 2654
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2655 AATTGAGAGTCAGTTTCTGGAAAGCCTTGCAGATAACCTAAATGCAGAGATTGCTCTGGGAACAGTTACTAATG 2728
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2729 TGGAAGAAGCAGTGAAGTGGATAAGTTACACTTATCTTTATGTACGGATGAGAGCAAATCCATTAGCATATGGC 2802
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2803 ATCAGTCACAAGGCTTATCAGATTGACCCAACATTAAGAAAGCATCGAGAACAGTTGGTCATTGAAGTTGGACG 2876
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2877 AAAACTAGACAAAGCTCAGATGATTCGTTTTGAGGAGCGAACTGGATATTTTTCCTCAACTGATTTGGGTAGAA 2950
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2951 CTGCCAGCCATTACTATATTAAATACAACACCATTGAGACCTTTAATGAACTCTTTGATGCTCACAAAACAGAA 3024
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3025 GGTGATATCTTTGCCATAGTCTCCAAAGCTGAAGAATTTGATCAAATTAAGGTCAGAGAAGAGGAAATAGAGGA 3098
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3099 GTTAGATACCTTATTAAGCAATTTTTGTGAACTCTCCACTCCTGGAGGTGTAGAGAATAGTTATGGGAAAATAA 3172
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3173 ACATCTTACTTCAAACTTATATCAGCCGAGGAGAAATGGACAGTTTCTCCCTTATATCAGATTCTGCATATGTT 3246
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3247 GCACAGAATGCAGCTAGAATTGTCCGTGCTCTTTTTGAAATTGCTCTGAGGAAACGTTGGCCTACCATGACCTA 3320
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3321 CAGGCTCCTGAATCTTAGTAAAGTCATTGACAAGAGGCTTTGGGGTTGGGCTAGCCCTTTGAGACAATTTTCAA 3394
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3395 TCCTACCACCACACATCCTAACAAGATTAGAAGAAAAAAAGCTTACTGTGGATAAGCTGAAAGACATGAGGAAA 3468
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3469 GATGAAATAGGTCACATTTTACATCATGTGAATATTGGACTGAAGGTCAAACAATGTGTTCATCAGATTCCTTC 3542
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3543 TGTTATGATGGAAGCATCCATTCAGCCTATCACAAGGACTGTCCTCCGAGTGACACTCAGCATCTATGCTGATT 3616
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3617 TCACTTGGAATGATCAGGTACATGGGACAGTAGGAGAACCTTGGTGGATTTGGGTAGAAGATCCTACAAATGAT 3690
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3691 CATATTTATCATTCAGAGTATTTTCTAGCTCTAAAAAAACAAGTCATTAGTAAAGAAGCCCAACTACTGGTATT 3764
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3765 TACAATCCCTATTTTTGAGCCTTTGCCTTCCCAATACTACATCCGAGCAGTGTCTGATAGATGGTTGGGTGCTG 3838
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3839 AGGCAGTATGTATTATCAACTTTCAACATCTAATTCTACCAGAGAGACATCCTCCTCATACAGAATTACTGGAT 3912
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3913 CTTCAGCCTTTACCAATCACAGCTTTGGGATGTAAAGCATATGAAGCCCTGTACAACTTCAGCCACTTTAACCC 3986
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3987 TGTACAGACACAAATATTTCATACATTGTATCACACGGATTGTAATGTCCTACTTGGAGCACCTACTGGATCGG 4060
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4061 GAAAGACTGTTGCAGCTGAATTAGCCATTTTCAGAGTCTTCAACAAATACCCTACTTCAAAGGCGGTATATATT 4134
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4135 GCACCCCTAAAAGCCCTAGTACGTGAAAGAATGGATGATTGGAAAGTTAGAATAGAAGAAAAACTTGGTAAAAA 4208
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4209 AGTTATTGAACTAACAGGGGATGTGACTCCTGATATGAAATCCATTGCCAAGGCTGACCTTATCGTCACTACGC 4282
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4283 CAGAGAAGTGGGATGGAGTCAGCAGAAGCTGGCAAAATAGGAACTATGTTCAGCAAGTCACTATTCTCATCATA 4356
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4357 GATGAGATCCATCTGCTTGGGGAGGAAAGAGGCCCTGTTCTAGAGGTCATTGTATCTCGAACAAATTTTATCTC 4430
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4431 ATCACACACAGAAAAGCCTGTTAGAATAGTTGGACTATCTACTGCATTAGCTAATGCCAGAGACCTTGCTGATT 4504
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4505 GGCTCAATATTAAGCAGATGGGCTTGTTTAACTTCCGACCATCAGTACGCCCAGTTCCACTGGAAGTTCACATT 4578
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4579 CAAGGCTTTCCAGGTCAACATTACTGTCCTCGTATGGCTAGTATGAACAAGCCTGCATTTCAGGCAATTAGAAG 4652
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4653 CCATTCTCCAGCCAAACCTGTTTTGATATTTGTCTCATCAAGACGTCAAACTCGTCTTACTGCTTTGGAATTGA 4726
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4727 TCGCCTTCCTGGCTACTGAAGAAGATCCAAAGCAGTGGTTAAACATGGATGAAAGAGAGATGGAGAACATCATT 4800
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4801 GCAACAGTAAGAGATTCCAACCTCAAGCTGACCCTTGCTTTCGGGATAGGAATGCATCATGCTGGACTACATGA 4874
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4875 GAGGGACCGAAAAACAGTAGAGGAACTATTTGTAAACTGTAAAGTTCAGGTTCTTATTGCTACAAGCACATTAG 4948
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4949 CCTGGGGTGTAAACTTTCCAGCTCATTTAGTAATTATTAAGGGAACAGAATACTATGATGGAAAAACAAGACGT 5022
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5023 TATGTGGATTTTCCCATTACAGATGTCCTCCAGATGATGGGGCGTGCTGGGAGGCCGCAGTTCGATGACCAAGG 5096
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5097 CAAAGCTGTAATTCTAGTTCATGACATAAAGAAAGACTTTTATAAAAAATTTCTTTATGAACCTTTCCCAGTAG 5170
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5171 AATCAAGTTTATTAGGAGTGCTCTCTGACCACTTAAATGCAGAGATTGCTGGTGGTACAATTACATCTAAGCAA 5244
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5245 GATGCATTGGATTATATCACCTGGACTTACTTTTTCCGACGTCTTATCATGAATCCCAGCTATTACAATTTGGG 5318
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5319 TGATGTGAGCCATGATTCTGTGAACAAGTTTCTGTCCCATCTGATTGAGAAGTCCCTGATTGAATTGGAACTTT 5392
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5393 CCTACTGTATTGAAATTGGAGAGGATAATCGCAGCATTGAACCTCTAACTTATGGCCGAATTGCCTCCTATTAC 5466
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5467 TATTTGAAGCATCAAACAGTTAAAATGTTCAAGGACCGCTTGAAGCCTGAATGCAGTACTGAAGAACTGCTTTC 5540
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5541 AATTCTAAGTGATGCAGAAGAATATACAGATTTGCCAGTGAGACACAATGAAGATCATATGAATAGTGAACTGG 5614
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5615 CAAAATGTCTTCCCATTGAATCAAATCCTCATTCATTTGACAGCCCTCACACCAAAGCACATCTCCTGCTACAG 5688
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5689 GCACATCTCAGCCGAGCCATGCTACCCTGCCCAGATTATGACACTGATACCAAAACAGTCTTGGACCAAGCTCT 5762
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5763 CAGAGTATGTCAGGCAATGCTGGACGTGGCTGCAAACCAGGGCTGGCTGGTGACTGTCCTGAATATCACCAACC 5836
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5837 TGATTCAGATGGTGATCCAGGGTCGGTGGTTAAAGGACTCTTCTCTTCTTACACTACCAAACATAGAAAACCAT 5910
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5911 CATCTTCACCTTTTCAAGAAATGGAAGCCGATTATGAAGGGCCCACATGCTAGGGGTCGGACCTCCATCGAGTC 5984
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5985 CCTTCCTGAACTGATCCATGCCTGTGGAGGGAAAGACCATGTATTTAGCTCCATGGTAGAAAGTGAGCTACATG 6058
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6059 CTGCAAAAACGAAACAGGCATGGAATTTCTTATCTCACTTGCCAGTGATAAATGTTGGCATAAGTGTTAAAGGC 6132
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6133 TCGTGGGATGACTTAGTTGAAGGACATAATGAACTCTCTGTCTCAACTCTGACTGCAGACAAACGAGATGACAA 6206
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6207 CAAATGGATCAAATTGCATGCTGACCAAGAGTATGTGCTTCAAGTGAGCTTGCAGAGAGTCCACTTTGGGTTCC 6280
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6281 ACAAGGGAAAGCCAGAGAGCTGTGCAGTTACTCCTCGATTTCCCAAATCAAAAGACGAAGGATGGTTTTTGATA 6354
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6355 TTAGGAGAAGTGGATAAGAGAGAACTTATTGCTTTGAAAAGAGTAGGATATATTCGAAATCATCATGTTGCTTC 6428
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6429 CCTTTCTTTTTATACCCCTGAAATACCTGGAAGGTATATCTACACATTATATTTCATGAGTGACTGCTACCTTG 6502
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6503 GCCTGGACCAGCAGTATGACATCTATCTCAACGTTACACAAGCGAGTCTTTCTGCACAGGTCAACACCAAGGTC 6576
Query 334 ------------------------------ 333
Sbjct 6577 TCTGATTCCCTGACTGACCTGGCATTAAAG 6606
