Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02581
- Subject:
- XM_011535394.3
- Aligned Length:
- 6631
- Identities:
- 307
- Gaps:
- 6308
Alignment
Query 1 ATGGCTTTACCTCGTCTCACAGGAGCCTTGCGTTCCTTTTCAAATGTCACCAAGCAAGATAATTATAATGAAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTTTACCTCGTCTCACAGGAGCCTTGCGTTCCTTTTCAAATGTCACCAAGCAAGATAATTATAATGAAGA 74
Query 75 AGTGGCTGAC---------------TTAAAGATAAAGCGATCTAAACTTCATGAACAAGTTTTAGATTTGGGCC 133
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGTGGCTGACTTAAAGGTAGATTTGTTAAAGATAAAGCGATCTAAACTTCATGAACAAGTTTTAGATTTGGGCC 148
Query 134 TGACATGGAAGAAGATAATAAAATTTTTGAATGAAAAACTGGAGAAGAGTAAAATGCAAAGTATAAATGAAGAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGACATGGAAGAAGATAATAAAATTTTTGAATGAAAAACTGGAGAAGAGTAAAATGCAAAGTATAAATGAAGAC 222
Query 208 TTAAAAGATATATTACATGCTGCAAAGCAGATAG-------------------------------AAGTG---- 246
|||||||||||||||||||||||||||||||||| |||||
Sbjct 223 TTAAAAGATATATTACATGCTGCAAAGCAGATAGTTGGAACTGATAATGGGAGAGAAGCAATTGAAAGTGGGGC 296
Query 247 ---AATTGTC-------CATTCCA---GAAGAGGAGGCTG-------GATGGAAAAGAGGAGG--ATGAGA-AG 297
|.||.|| ||||.|| || ||||..||| .|.|||||..| ||| ||.|.| ||
Sbjct 297 TGCATTTCTCTTCATGACATTTCACTTGA--AGGACTCTGTTGGTCACAAGGAAACAA--AGGCTATCAAACAG 366
Query 298 ATG-----------------AGCAGAGCTTCTGACAGATTCAG------AGG--ACTAA--GA----------- 333
||| |.|| ||||.|| .|.||| |.| ||||| ||
Sbjct 367 ATGTTTGGCCCCTTTCCTTCATCA-----TCTGCCA-CTGCAGCTTGTAATGCTACTAATCGAATTATTTCTCA 434
Query 334 -------------------------------------------------------------------------- 333
Sbjct 435 TTTTAGTCAAGATGATCTTACTGCTCTTGTGCAGATGACAGAAAAAGAACATGGCGATAGGGTTTTTTTTGGTA 508
Query 334 -------------------------------------------------------------------------- 333
Sbjct 509 AAAATTTAGCATTTTCATTTGACATGCATGATTTGGACCACTTTGACGAACTGCCAATAAATGGTGAAACTCAG 582
Query 334 -------------------------------------------------------------------------- 333
Sbjct 583 AAAACTATAAGCCTAGATTATAAGAAGTTTCTGAATGAACATCTCCAGGAGGCTTGCACCCCAGAACTCAAGCC 656
Query 334 -------------------------------------------------------------------------- 333
Sbjct 657 TGTGGAAAAAACAAATGGCTCCTTTTTGTGGTGTGAAGTTGAAAAGTACCTAAATTCAACTTTGAAGGAAATGA 730
Query 334 -------------------------------------------------------------------------- 333
Sbjct 731 CTGAAGTGCCAAGAGTAGAAGATCTTTGCTGTACTTTATATGATATGCTTGCTTCTATTAAAAGTGGTGATGAA 804
Query 334 -------------------------------------------------------------------------- 333
Sbjct 805 CTTCAGGATGAGCTATTTGAACTGCTGGGACCTGAAGGACTTGAACTTATTGAGAAACTCCTCCAGAACAGAAT 878
Query 334 -------------------------------------------------------------------------- 333
Sbjct 879 TACAATTGTGGATAGATTTCTTAATTCTTCAAATGATCATAGGTTTCAGGCTCTTCAAGACAATTGTAAAAAAA 952
Query 334 -------------------------------------------------------------------------- 333
Sbjct 953 TTTTAGGAGAAAATGCTAAACCCAATTATGGTTGTCAAGTCACTATTCAGTCTGAACAAGAAAAGCAGTTAATG 1026
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1027 AAACAATATCGACGTGAAGAAAAAAGAATTGCCAGACGAGAAAAAAAGGCTGGAGAAGATTTAGAAGTTTCAGA 1100
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1101 AGGACTTATGTGCTTTGATCCTAAGGAATTGCGGATACAAAGAGAACAGGCACTTCTGAATGCTAGAAGTGTTC 1174
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1175 CAATTCTGAGCAGGCAGAGAGATGCAGACGTTGAAAAAATACATTATCCCCATGTGTATGATTCCCAGGCTGAA 1248
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1249 GCCATGAAAACATCAGCATTTATTGCTGGTGCAAAGATGATTTTGCCAGAAGGAATCCAAAGAGAGAATAACAA 1322
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1323 GCTTTATGAAGAAGTAAGGATTCCCTACAGCGAACCAATGCCACTCAGCTTTGAGGAAAAGCCAGTTTATATCC 1396
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1397 AAGACTTAGATGAGATCGGACAGCTGGCTTTTAAAGGAATGAAGAGACTCAATAGAATCCAGTCAATAGTGTTT 1470
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1471 GAGACTGCCTACAACACCAATGAGAACATGCTGATTTGTGCCCCTACAGGAGCTGGAAAAACCAACATTGCAAT 1544
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1545 GCTGACAGTCTTGCATGAAATTCGCCAACATTTTCAACAAGGTGTTATCAAAAAGAATGAATTTAAGATTGTAT 1618
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1619 ATGTTGCTCCAATGAAAGCCTTGGCAGCTGAAATGACAGATTACTTCAGCAGACGTCTAGAGCCACTAGGCATC 1692
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1693 ATTGTGAAAGAATTGACTGGTGACATGCAGTTGTCCAAAAGTGAAATTTTACGAACTCAGATGCTTGTGACCAC 1766
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1767 ACCAGAAAAATGGGATGTAGTGACAAGAAAGAGTGTTGGGGATGTAGCTCTTTCCCAGATTGTAAGGCTCCTTA 1840
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1841 TTCTTGATGAAGTTCATTTGCTGCATGAAGATAGAGGACCAGTATTAGAAAGCATAGTTGCCCGTACTTTACGG 1914
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1915 CAGGTGGAATCCACACAGAGTATGATAAGGATTCTCGGACTGTCTGCAACTTTACCTAACTACCTCGATGTTGC 1988
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1989 CACATTTTTACATGTTAATCCATACATTGGACTTTTCTTCTTTGATGGCCGTTTTCGACCAGTACCTCTTGGAC 2062
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2063 AGACATTTTTGGGGATTAAATGTGCAAATAAGATGCAGCAGTTGAATAACATGGATGAAGTATGTTATGAAAAT 2136
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2137 GTTTTGAAGCAAGTAAAGGCTGGACACCAGGTGATGGTGTTTGTACATGCTCGAAATGCCACTGTAAGAACAGC 2210
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2211 TATGTCTCTAATAGAAAGAGCAAAAAATTGTGGCCATATTCCCTTCTTTTTTCCTACCCAAGGACATGACTATG 2284
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2285 TACTTGCAGAAAAACAGGTACAAAGGTCGAGAAATAAGCAAGTACGAGAATTATTCCCAGATGGTTTTAGTATT 2358
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2359 CATCATGCAGGAATGCTTCGGCAGGACAGAAATTTAGTTGAAAACTTGTTTTCTAATGGGCATATCAAAGTCCT 2432
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2433 AGTGTGTACAGCTACGTTAGCCTGGGGTGTCAATCTTCCCGCCCATGCTGTTATTATTAAGGGAACACAAATAT 2506
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2507 ATGCTGCAAAAAGAGGCTCCTTTGTTGACCTTGGAATTTTAGATGTCATGCAGATATTTGGTCGAGCTGGACGA 2580
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2581 CCACAATTTGACAAATTTGGGGAAGGAATAATTATAACAACGCATGATAAACTCAGCCATTACCTCACTTTGCT 2654
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2655 CACTCAACGAAACCCAATTGAGAGTCAGTTTCTGGAAAGCCTTGCAGATAACCTAAATGCAGAGATTGCTCTGG 2728
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2729 GAACAGTTACTAATGTGGAAGAAGCAGTGAAGTGGATAAGTTACACTTATCTTTATGTACGGATGAGAGCAAAT 2802
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2803 CCATTAGCATATGGCATCAGTCACAAGGCTTATCAGATTGACCCAACATTAAGAAAGCATCGAGAACAGTTGGT 2876
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2877 CATTGAAGTTGGACGAAAACTAGACAAAGCTCAGATGATTCGTTTTGAGGAGCGAACTGGATATTTTTCCTCAA 2950
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2951 CTGATTTGGGTAGAACTGCCAGCCATTACTATATTAAATACAACACCATTGAGACCTTTAATGAACTCTTTGAT 3024
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3025 GCTCACAAAACAGAAGGTGATATCTTTGCCATAGTCTCCAAAGCTGAAGAATTTGATCAAATTAAGGTCAGAGA 3098
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3099 AGAGGAAATAGAGGAGTTAGATACCTTATTAAGCAATTTTTGTGAACTCTCCACTCCTGGAGGTGTAGAGAATA 3172
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3173 GTTATGGGAAAATAAACATCTTACTTCAAACTTATATCAGCCGAGGAGAAATGGACAGTTTCTCCCTTATATCA 3246
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3247 GATTCTGCATATGTTGCACAGAATGCAGCTAGAATTGTCCGTGCTCTTTTTGAAATTGCTCTGAGGAAACGTTG 3320
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3321 GCCTACCATGACCTACAGGCTCCTGAATCTTAGTAAAGTCATTGACAAGAGGCTTTGGGGTTGGGCTAGCCCTT 3394
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3395 TGAGACAATTTTCAATCCTACCACCACACATCCTAACAAGATTAGAAGAAAAAAAGCTTACTGTGGATAAGCTG 3468
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3469 AAAGACATGAGGAAAGATGAAATAGGTCACATTTTACATCATGTGAATATTGGACTGAAGGTCAAACAATGTGT 3542
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3543 TCATCAGATTCCTTCTGTTATGATGGAAGCATCCATTCAGCCTATCACAAGGACTGTCCTCCGAGTGACACTCA 3616
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3617 GCATCTATGCTGATTTCACTTGGAATGATCAGGTACATGGGACAGTAGGAGAACCTTGGTGGATTTGGGTAGAA 3690
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3691 GATCCTACAAATGATCATATTTATCATTCAGAGTATTTTCTAGCTCTAAAAAAACAAGTCATTAGTAAAGAAGC 3764
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3765 CCAACTACTGGTATTTACAATCCCTATTTTTGAGCCTTTGCCTTCCCAATACTACATCCGAGCAGTGTCTGATA 3838
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3839 GATGGTTGGGTGCTGAGGCAGTATGTATTATCAACTTTCAACATCTAATTCTACCAGAGAGACATCCTCCTCAT 3912
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3913 ACAGAATTACTGGATCTTCAGCCTTTACCAATCACAGCTTTGGGATGTAAAGCATATGAAGCCCTGTACAACTT 3986
Query 334 -------------------------------------------------------------------------- 333
Sbjct 3987 CAGCCACTTTAACCCTGTACAGACACAAATATTTCATACATTGTATCACACGGATTGTAATGTCCTACTTGGAG 4060
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4061 CACCTACTGGATCGGGAAAGACTGTTGCAGCTGAATTAGCCATTTTCAGAGTCTTCAACAAATACCCTACTTCA 4134
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4135 AAGGCGGTATATATTGCACCCCTAAAAGCCCTAGTACGTGAAAGAATGGATGATTGGAAAGTTAGAATAGAAGA 4208
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4209 AAAACTTGGTAAAAAAGTTATTGAACTAACAGGGGATGTGACTCCTGATATGAAATCCATTGCCAAGGCTGACC 4282
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4283 TTATCGTCACTACGCCAGAGAAGTGGGATGGAGTCAGCAGAAGCTGGCAAAATAGGAACTATGTTCAGCAAGTC 4356
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4357 ACTATTCTCATCATAGATGAGATCCATCTGCTTGGGGAGGAAAGAGGCCCTGTTCTAGAGGTCATTGTATCTCG 4430
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4431 AACAAATTTTATCTCATCACACACAGAAAAGCCTGTTAGAATAGTTGGACTATCTACTGCATTAGCTAATGCCA 4504
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4505 GAGACCTTGCTGATTGGCTCAATATTAAGCAGATGGGCTTGTTTAACTTCCGACCATCAGTACGCCCAGTTCCA 4578
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4579 CTGGAAGTTCACATTCAAGGCTTTCCAGGTCAACATTACTGTCCTCGTATGGCTAGTATGAACAAGCCTGCATT 4652
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4653 TCAGGCAATTAGAAGCCATTCTCCAGCCAAACCTGTTTTGATATTTGTCTCATCAAGACGTCAAACTCGTCTTA 4726
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4727 CTGCTTTGGAATTGATCGCCTTCCTGGCTACTGAAGAAGATCCAAAGCAGTGGTTAAACATGGATGAAAGAGAG 4800
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4801 ATGGAGAACATCATTGCAACAGTAAGAGATTCCAACCTCAAGCTGACCCTTGCTTTCGGGATAGGAATGCATCA 4874
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4875 TGCTGGACTACATGAGAGGGACCGAAAAACAGTAGAGGAACTATTTGTAAACTGTAAAGTTCAGGTTCTTATTG 4948
Query 334 -------------------------------------------------------------------------- 333
Sbjct 4949 CTACAAGCACATTAGCCTGGGGTGTAAACTTTCCAGCTCATTTAGTAATTATTAAGGGAACAGAATACTATGAT 5022
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5023 GGAAAAACAAGACGTTATGTGGATTTTCCCATTACAGATGTCCTCCAGATGATGGGGCGTGCTGGGAGGCCGCA 5096
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5097 GTTCGATGACCAAGGCAAAGCTGTAATTCTAGTTCATGACATAAAGAAAGACTTTTATAAAAAATTTCTTTATG 5170
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5171 AACCTTTCCCAGTAGAATCAAGTTTATTAGGAGTGCTCTCTGACCACTTAAATGCAGAGATTGCTGGTGGTACA 5244
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5245 ATTACATCTAAGCAAGATGCATTGGATTATATCACCTGGACTTACTTTTTCCGACGTCTTATCATGAATCCCAG 5318
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5319 CTATTACAATTTGGGTGATGTGAGCCATGATTCTGTGAACAAGTTTCTGTCCCATCTGATTGAGAAGTCCCTGA 5392
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5393 TTGAATTGGAACTTTCCTACTGTATTGAAATTGGAGAGGATAATCGCAGCATTGAACCTCTAACTTATGGCCGA 5466
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5467 ATTGCCTCCTATTACTATTTGAAGCATCAAACAGTTAAAATGTTCAAGGACCGCTTGAAGCCTGAATGCAGTAC 5540
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5541 TGAAGAACTGCTTTCAATTCTAAGTGATGCAGAAGAATATACAGATTTGCCAGTGAGACACAATGAAGATCATA 5614
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5615 TGAATAGTGAACTGGCAAAATGTCTTCCCATTGAATCAAATCCTCATTCATTTGACAGCCCTCACACCAAAGCA 5688
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5689 CATCTCCTGCTACAGGCACATCTCAGCCGAGCCATGCTACCCTGCCCAGATTATGACACTGATACCAAAACAGT 5762
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5763 CTTGGACCAAGCTCTCAGAGTATGTCAGGCAATGCTGGACGTGGCTGCAAACCAGGGCTGGCTGGTGACTGTCC 5836
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5837 TGAATATCACCAACCTGATTCAGATGGTGATCCAGGGTCGGTGGTTAAAGGACTCTTCTCTTCTTACACTACCA 5910
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5911 AACATAGAAAACCATCATCTTCACCTTTTCAAGAAATGGAAGCCGATTATGAAGGGCCCACATGCTAGGGGTCG 5984
Query 334 -------------------------------------------------------------------------- 333
Sbjct 5985 GACCTCCATCGAGTCCCTTCCTGAACTGATCCATGCCTGTGGAGGGAAAGACCATGTATTTAGCTCCATGGTAG 6058
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6059 AAAGTGAGCTACATGCTGCAAAAACGAAACAGGCATGGAATTTCTTATCTCACTTGCCAGTGATAAATGTTGGC 6132
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6133 ATAAGTGTTAAAGGCTCGTGGGATGACTTAGTTGAAGGACATAATGAACTCTCTGTCTCAACTCTGACTGCAGA 6206
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6207 CAAACGAGATGACAACAAATGGATCAAATTGCATGCTGACCAAGAGTATGTGCTTCAAGTGAGCTTGCAGAGAG 6280
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6281 TCCACTTTGGGTTCCACAAGGGAAAGCCAGAGAGCTGTGCAGTTACTCCTCGATTTCCCAAATCAAAAGACGAA 6354
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6355 GGATGGTTTTTGATATTAGGAGAAGTGGATAAGAGAGAACTTATTGCTTTGAAAAGAGTAGGATATATTCGAAA 6428
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6429 TCATCATGTTGCTTCCCTTTCTTTTTATACCCCTGAAATACCTGGAAGGTATATCTACACATTATATTTCATGA 6502
Query 334 -------------------------------------------------------------------------- 333
Sbjct 6503 GTGACTGCTACCTTGGCCTGGACCAGCAGTATGACATCTATCTCAACGTTACACAAGCGAGTCTTTCTGCACAG 6576
Query 334 --------------------------------------------- 333
Sbjct 6577 GTCAACACCAAGGTCTCTGATTCCCTGACTGACCTGGCATTAAAG 6621
