Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02664
Subject:
NM_001190800.1
Aligned Length:
1437
Identities:
970
Gaps:
363

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTACGGATTCTTGGGCCCTAGCAGTAGACGAACAGGAAGCCGCAGCTGAGTCTTTGAGCAACTTGCATCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAAGGAGGAGAAAATCAAACCAGATGCCAATGGTGCTGTTGTTAAGACCAATGCAAACACAGAGAAGACAGAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGATGAGAAAGAGGACAGAGCTGCTCAGTCTTTACTCAACAAGCTGATCAGAAGCAATCTTGTGGATAACACC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AACCAAGTGGAAGTCCTGCAGAGGGACCCAAGCTCCCCGCTCTACTCAGTGAAGTCCTTCGAAGAGCTTCGCCT  296

Query    1  -------------------------------ATGGGTTTCAATCGTCCATCCAAGATACAAGAGAACGCATTGC  43
                                           |||||||||||.||.||.|||||.|||||.||.||.|||||||
Sbjct  297  GAAACCACAGCTTCTCCAGGGAGTCTATGCTATGGGTTTCAACCGCCCTTCCAAAATACAGGAAAATGCATTGC  370

Query   44  CACTGATGCTTGCTGAGCCCCCACAGAACTTAATTGCCCAATCTCAGTCTGGTACTGGTAAAACAGCTGCCTTC  117
            |..|||||||||||||.|||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.
Sbjct  371  CTTTGATGCTTGCTGAACCCCCACAGAACTTAATTGCCCAGTCTCAGTCTGGTACGGGTAAAACAGCTGCCTTT  444

Query  118  GTGCTGGCCATGCTTAGCCAAGTAGAACCTGCAAACAAATACCCCCAGTGTCTATGTCTCTCCCCAACGTATGA  191
            ||..||||..||||.|||||||||||.|||||||||||.|...||||||||||.||.|||||.|||||.|||||
Sbjct  445  GTTTTGGCTGTGCTCAGCCAAGTAGAGCCTGCAAACAAGTTTGCCCAGTGTCTCTGCCTCTCTCCAACCTATGA  518

Query  192  GCTCGCCCTCCAAACAGGAAAAGTGATTGAACAAATGGGCAAATTTTACCCTGAACTGAAGCTAGCTTATGCTG  265
            |||.||.||.||||||||||||||||||||.||.||||||||.|||||||||||||||||||||||||||||||
Sbjct  519  GCTTGCTCTTCAAACAGGAAAAGTGATTGAGCAGATGGGCAAGTTTTACCCTGAACTGAAGCTAGCTTATGCTG  592

Query  266  TTCGAGGCAATAAATTGGAAAGAGGCCAGAAGATCAGTGAGCAGATTGTCATTGGCACCCCTGGGACTGTGCTG  339
            ||||||||||.||||||||.||.||.||||||.|.||||||||||||||||||||||||||.|||||.||..||
Sbjct  593  TTCGAGGCAACAAATTGGAGAGGGGTCAGAAGGTGAGTGAGCAGATTGTCATTGGCACCCCCGGGACCGTCTTG  666

Query  340  GACTGGTGCTCCAAGCTCAAGTTCATTGATCCCAAGAAAATCAAGGTGTTTGTTCTGGATGAGGCTGATGTCAT  413
            |||||||||||||||||.|||||||||||.||||||||.||||||||||||||||||||.|||||||||||.||
Sbjct  667  GACTGGTGCTCCAAGCTGAAGTTCATTGACCCCAAGAAGATCAAGGTGTTTGTTCTGGACGAGGCTGATGTGAT  740

Query  414  GATAGCCACTCAGGGCCACCAAGATCAGAGCATCCGCATCCAGAGGATGCTGCCCAGGAACTGCCAGATGCTGC  487
            ||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  741  GATAGCGACTCAGGGCCACCAAGACCAGAGCATCCGCATCCAGAGGATGCTGCCCAGAAACTGCCAGATGCTGC  814

Query  488  TTTTCTCCGCCACCTTTGAAGACTCTGTGTGGAAGTTTGCCCAGAAAGTGGTCCCAGACCCAAACGTTATCAAA  561
            |||||||.|||||||||||||||||.||||||||||||||||||||.||||||||||||||.|||.|.|||||.
Sbjct  815  TTTTCTCGGCCACCTTTGAAGACTCGGTGTGGAAGTTTGCCCAGAAGGTGGTCCCAGACCCCAACATCATCAAG  888

Query  562  CTGAAGCGTGAGGAAGAGACCCTGGACACCATCAAGCAGTACTATGTCCTGTGCAGCAGCAGAGACGAGAAGTT  635
            ||||||||||||||.|||||.||||||||||||||.||||||||.|||||.||||..|.||||||.||||||||
Sbjct  889  CTGAAGCGTGAGGAGGAGACTCTGGACACCATCAAACAGTACTACGTCCTCTGCAATAACAGAGAGGAGAAGTT  962

Query  636  CCAGGCCTTGTGTAACCTCTACGGGGCCATCACCATTGCTCAAGCCATGATCTTCTGCCATACTCGCAAAACAG  709
            |||||||.||||.||.||.||.||||||||||||||.||.|||||||||||||||||||||||.||||||||||
Sbjct  963  CCAGGCCCTGTGCAATCTGTATGGGGCCATCACCATCGCCCAAGCCATGATCTTCTGCCATACCCGCAAAACAG  1036

Query  710  CTAGTTGGCTGGCAGCAGAGCTCTCAAAAGAAGGCCACCAGGTGGCTCTGCTGAGTGGGGAGATGATGGTGGAA  783
            ||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||.
Sbjct 1037  CTAGCTGGCTGGCAGCAGAGCTCTCAAAAGAGGGCCACCAGGTGGCCCTGCTGAGTGGAGAGATGATGGTGGAG  1110

Query  784  CAGAGGGCTGCAGTGATTGAGCGCTTCCGAGAGGGCAAAGAGAAGGTTTTGGTGACCACCAACGTGTGTGCCCG  857
            |||||||||||.|||||.||||||||||||||.|||||||||||||||.|||||||||||||||||||||||||
Sbjct 1111  CAGAGGGCTGCGGTGATCGAGCGCTTCCGAGAAGGCAAAGAGAAGGTTCTGGTGACCACCAACGTGTGTGCCCG  1184

Query  858  CGGCATTGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACAAGGACGGGAATCCTGACA  931
            .||.||.|||||||||||.|||||||||||||||||.|||||.||.||.|||||||||||||||||.||.||||
Sbjct 1185  TGGTATCGATGTTGAACAGGTGTCTGTCGTCATCAATTTTGACCTCCCTGTGGACAAGGACGGGAACCCAGACA  1258

Query  932  ATGAGACCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTGGCAGTGAACATGGTGGAC  1005
            |||||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||.||.||||||||||||
Sbjct 1259  ATGAGACCTACCTGCACCGCATTGGGCGCACTGGCCGCTTTGGCAAGAGGGGTCTGGCGGTCAACATGGTGGAC  1332

Query 1006  AGCAAGCACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGATAGAAAGATTGGACACAGA  1079
            |||||||||||||||||.|||||.|||||.||||||||||||||||     ||||||||||||.||||||||||
Sbjct 1333  AGCAAGCACAGCATGAATATCCTCAACAGGATCCAGGAGCATTTTA-----AAGATAGAAAGACTGGACACAGA  1401

Query 1080  TGATTTGGACGAGATTGAGAAAATAGCCAAC  1110
                                           
Sbjct 1402  -------------------------------  1401

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