Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02720
- Subject:
- NM_001172437.2
- Aligned Length:
- 2351
- Identities:
- 975
- Gaps:
- 1376
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGAAATAAGCGGGTTTTGAAAACAAAAAAAAGAAGGAGTGGAAGAGGGGGCCAGGATCCAGGCCTCCATCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACAGAAGTGAAGCTACAGCTGGGAGGTCTCCTCCCACCCCAACCGTCACCCTGGGTCCCGACTGCCCACCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCCTCCTCCCCCTCCCCCCAACAACAACAACAACAACAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGTC 222
Query 1 ------ATGACCGAACGAAGAAGGGACGAGCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGTCATGAAGCA 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCCAACATGACCGAACGAAGAAGGGACGAGCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGTCATGAAGCA 296
Query 69 GTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCACCCTTCGAGAGCAAG 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCACCCTTCGAGAGCAAG 370
Query 143 TGGAACCCACCCCTGAGGATGAGGATGATGACATCGAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCCCCT 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGAACCCACCCCTGAGGATGAGGATGATGACATCGAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCCCCT 444
Query 217 CCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCTTTCAT 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCTTTCAT 518
Query 291 GGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGA 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGA 592
Query 365 CAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCCACTACCTGATGCACAAC 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCCACTACCTGATGCACAAC 666
Query 439 TACCCAGCTTTCATGATGGAAATGAAGCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGCCAAACGCAAGAT 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TACCCAGCTTTCATGATGGAAATGAAGCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGCCAAACGCAAGAT 740
Query 513 CAGACGCCTGCGCCAAGGCATGGGGTCTGTCATCGACTACTCCAATGCTTTCCAGATGATTGCCCAGGACCTGG 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGACGCCTGCGCCAAGGCATGGGGTCTGTCATCGACTACTCCAATGCTTTCCAGATGATTGCCCAGGACCTGG 814
Query 587 ATTGGAACGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCAC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATTGGAACGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCAC 888
Query 661 CTCGAGGTCGCCAAGTCGCTGTCTGCTCTGATTGGGCAGTGCATTCACATTGAGAGAAGGCTGGCCAGGGCTGC 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTCGAGGTCGCCAAGTCGCTGTCTGCTCTGATTGGGCAGTGCATTCACATTGAGAGAAGGCTGGCCAGGGCTGC 962
Query 735 TGCAGCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATC 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGCAGCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATC 1036
Query 809 CAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAGACGCAGAAAGCTGAACCTG 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAGACGCAGAAAGCTGAACCTG 1110
Query 883 TGCCTCTACTGTGGAACAGGAGGTCACTACGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGGG 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGCCTCTACTGTGGAACAGGAGGTCACTACGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGGG 1184
Query 957 AAACTCCCCGGCCCCGCTG------------------------------------------------------- 975
|||||||||||||||||||
Sbjct 1185 AAACTCCCCGGCCCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAAATAATAAGGTCCCCACAAGATGATGC 1258
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1259 CTCATCTCCACACTTGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGA 1332
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1333 TCGATTCTGGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCTCTAAGAATCAAG 1406
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1407 GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGA 1480
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1481 CCTGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCCTGTCG 1554
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1555 TCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCT 1628
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1629 GAATACTGCCGCTACCACTGCCGGATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCC 1702
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1703 ACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTACTATGTCCAGAATGTGTACACTC 1776
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1777 CAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGT 1850
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1851 ATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTTGTGGCAAGAAATGT 1924
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1925 AAAAGATGGGCTAATTACTCCAACGATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTGGAAAC 1998
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1999 TGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAGTATCCTCGCCTATCTATTCCA 2072
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2073 AATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCC 2146
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2147 CACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGAT 2220
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2221 CACTATATGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCG 2294
Query 976 --------------------------------------------------------- 975
Sbjct 2295 CCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTACCCTG 2351
