Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02720
- Subject:
- NM_001184961.1
- Aligned Length:
- 2225
- Identities:
- 975
- Gaps:
- 1250
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGGGTCCCGACTGCCCACCTCCTCCTCCTCCCCCTCCCCCCAACAACAACAACAACAACAACTCCAAGCACAC 74
Query 1 ----------------------------ATGACCGAACGAAGAAGGGACGAGCTCTCTGAAGAGATCAACAACT 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGCCATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAGAAGGGACGAGCTCTCTGAAGAGATCAACAACT 148
Query 47 TAAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TAAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAG 222
Query 121 AACACCACCCTTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGGATGATGACATCGAGCTCCGCGGTGCTGC 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AACACCACCCTTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGGATGATGACATCGAGCTCCGCGGTGCTGC 296
Query 195 AGCAGCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACC 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCAGCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACC 370
Query 269 CAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGAT 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGAT 444
Query 343 CGTGTCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGTGTCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCG 518
Query 417 CTCCCACTACCTGATGCACAACTACCCAGCTTTCATGATGGAAATGAAGCATGTCTTTGAAGACCCTCAGAGGC 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCCCACTACCTGATGCACAACTACCCAGCTTTCATGATGGAAATGAAGCATGTCTTTGAAGACCCTCAGAGGC 592
Query 491 GAGAGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTCATCGACTACTCCAATGCTTTC 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGAGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTCATCGACTACTCCAATGCTTTC 666
Query 565 CAGATGATTGCCCAGGACCTGGATTGGAACGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGACCA 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGATGATTGCCCAGGACCTGGATTGGAACGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGACCA 740
Query 639 CATTCAGGAGGAGCTCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCTGATTGGGCAGTGCATTCACATTG 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATTCAGGAGGAGCTCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCTGATTGGGCAGTGCATTCACATTG 814
Query 713 AGAGAAGGCTGGCCAGGGCTGCTGCAGCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTGTTGCCTCACATT 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAGAAGGCTGGCCAGGGCTGCTGCAGCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTGTTGCCTCACATT 888
Query 787 GCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAAAAAGA 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAAAAAGA 962
Query 861 AAGACGCAGAAAGCTGAACCTGTGCCTCTACTGTGGAACAGGAGGTCACTACGCTGACAATTGTCCTGCCAAGG 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGACGCAGAAAGCTGAACCTGTGCCTCTACTGTGGAACAGGAGGTCACTACGCTGACAATTGTCCTGCCAAGG 1036
Query 935 CCTCAAAGTCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTG--------------------------------- 975
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCTCAAAGTCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAAATAA 1110
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1111 TAAGGTCCCCACAAGATGATGCCTCATCTCCACACTTGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACAC 1184
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1185 ACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAA 1258
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1259 TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCC 1332
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1333 CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACT 1406
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1407 CAGTCTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAGCAC 1480
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1481 TCGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCTCCAATACCACCATCGCTCC 1554
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1555 CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTAC 1628
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1629 TATGTCCAGAATGTGTACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACATAGA 1702
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1703 AATGATACCTGGAGCACACAGTATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTC 1776
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1777 GAGATTTTGTGGCAAGAAATGTAAAAGATGGGCTAATTACTCCAACGATTGCACCTAATGGAGCCCAAGTTCTC 1850
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1851 CAGGTGAAGAGGGGGTGGAAACTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCA 1924
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1925 GTATCCTCGCCTATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAA 1998
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1999 TACCTGGATACCAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGGTACCCAGTG 2072
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2073 GGACGAGACGGACAAGGAAGATCACTATATGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCC 2146
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2147 TCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTA 2220
Query 976 ----- 975
Sbjct 2221 CCCTG 2225
