Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02742
• Subject: NM_001109685.1
• Aligned Length: 1245
• Identities: 901
• Gaps: 267

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCGGGCGGCCGATTCGGGTTCATGGGAGCGCGTCCGCCAGCTTGCGGCATACGGCCAGCCGACTCCGTCCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGGCGGGACACCGGGTCCGCGCGCGTCCCGGAGCCCGGAGCCTGCAAGCTATGCGCGGACACTACGGGGCTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGAGCAGCAGGGAGCTGGAGCAGTCCCCGATGCAGCCGATGGCTTCGGCATCCAGCCCGTGCTCCTGCGGGAG  222

Query    1  ------------------------------------------ATGAAGGAGATGTTGGCGAAGGACCTGGAGGA  32
                                                      ||||||||.|||.|||||||||||||||||||
Sbjct  223  GAAGTGGTCCAGCTTCAAGAGGAAGTGCACCTTCTCCGGCAGATGAAGGAAATGCTGGCGAAGGACCTGGAGGA  296

Query   33  GTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGG  106
            |||.|||||||||||||.|||||||||||||||.|||||.||||||.||||.|||||||..|||||||||||||
Sbjct  297  GTCACAGGGCGGCAAGTGCTCTGAGGTCCTCTCAGCCACTGAGCTCCGGGTGCAGCTGGTACAGAAGGAGCAGG  370

Query  107  AGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGATCGGAAGCGCTTAAAGGGCGAGAAGACAGAC  180
            |.||.|||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||.|||
Sbjct  371  AACTGGCCAGAGCCAAAGAAGCCTTGCAAGCCATGAAAGCTGACCGGAAGCGCTTAAAGGGCGAGAAGACTGAC  444

Query  181  CTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCATCCGCAA  254
            ||||||||||||||||||||||||||.|||||.|||||||||||||||||||||.|.|||||||||||||||||
Sbjct  445  CTGGTGAGCCAGATGCAGCAGCTGTACGCCACGCTGGAGAGCCGCGAGGAGCAGTTGCGAGACTTCATCCGCAA  518

Query  255  CTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTG  328
            ||||||||||||||||||||||||.||.||.||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct  519  CTATGAGCAGCACCGCAAGGAGAGTGAAGACGCAGTCAAAGCACTGGCCAAGGAGAAGGACCTGCTGGAGCGAG  592

Query  329  AGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTGCGCTCCCAGCTGGACCTC  402
            |||||||||||||.||.||.||.||||||||.|||||||||||.||..||||.|||||||||||||||||||||
Sbjct  593  AGAAGTGGGAGCTTCGACGGCAGGCCAAGGAAGCCACAGACCATGCTGCGGCCCTGCGCTCCCAGCTGGACCTC  666

Query  403  AAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCTTAGCTACGCTGACCAAGGA  476
            |||||||||||.|||||||||||||||||.|||||.|||||||||||.|||||||||||.||.|||||||||||
Sbjct  667  AAGGACAACCGCATGAAGGAGCTGGAGGCGGAGCTCGCCATGGCCAAGCAGTCCTTAGCCACTCTGACCAAGGA  740

Query  477  CGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGG  550
            .|||||||||.|||||||||||||||||||.||.||||||||||||||||||||||||||.|||||||||||||
Sbjct  741  TGTCCCCAAGAGGCATTCCCTCGCCATGCCCGGTGAGACGGTGCTCAATGGCAACCAGGAATGGGTGGTGCAGG  814

Query  551  CGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCACACCCCCCTCACCCTGCG  624
            |.||||||||.|||||.||.|||||||||||.||.||||||||||||||||||||||||||.||.||||||||.
Sbjct  815  CTGACCTCCCACTGACTGCTGCCATCCGGCAAAGCCAACAGACTCTCTACCACTCACACCCTCCCCACCCTGCA  888

Query  625  GACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTGCCGCCGA  698
            |||||||||   |||||||||||||||||||||||..|.||||||||.||||||||.||.||.|||||.||.||
Sbjct  889  GACCGGCAA---GTCAGGGTGAGCCCCTGCCACTCAAGACAGCCCTCCGTCATCTCTGATGCTTCTGCTGCTGA  959

Query  699  AGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGGCGACA  772
            |||.||||||||.||.|||||.|||||||||||||||||..|||||||||||||||||||||||||||||||||
Sbjct  960  AGGTGACCGGTCATCTACACCAAGCGACATCAACTCCCCAAGACACCGGACACACTCCCTCTGCAACGGCGACA  1033

Query  773  GTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGATCTTGAAGACCAAAAACGG  846
            |||||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034  GTCCCGGCCCAGTTCAGAAGAGCCTACACAACCCTATTGTACAGTCACTAGAGGATCTTGAAGACCAAAAACGG  1107

Query  847  AAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCT  920
            |||||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||.|||||||||||
Sbjct 1108  AAAAAGAAGAAGGAGAAGATGGGATTCGGCTCCATCTCTCGAGTCTTCGCCAGAGGGAAGCAACGGAAGTCCCT  1181

Query  921  CGACCCCGGCCTCTTTGATGGTACCGCCCCTGATTATTACATAGAGGAGGACGCGGACTGG  981
            ||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1182  CGACCCGGGCCTCTTTGATGGTACCGCCCCTGATTATTACATAGAGGAAGACGCGGACTGG  1242