Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02749
- Subject:
- NM_173732.3
- Aligned Length:
- 1339
- Identities:
- 650
- Gaps:
- 590
Alignment
Query 1 ATGGCGGGAGGAATGAAAGTGGCGGTCTCGCCGGCAGTTGGTCCCGGGCCCTGGGGCTCGGGAGTCGGGGGCGG 74
||||||||||||||.||||||.||||.|.|.||||.||||||||.||||||.||.|||.|||.|.|||||||||
Sbjct 1 ATGGCGGGAGGAATCAAAGTGTCGGTGTGGTCGGCGGTTGGTCCAGGGCCCCGGTGCTGGGGGGCCGGGGGCGG 74
Query 75 TGGGACAGTGC-----GGCTACTCTTGATCCTCTCCGGCTGCTTGGTCTACGGCACAGCTGAAACTGATGTAAA 143
.|| |.|.|| ||||.||||||.||.||.||||||||.||||||.||||.||| ||||||||||
Sbjct 75 CGG--CGGCGCCACATGGCTGCTCTTGGTCGTCGCCGGCTGCGTGGTCTGCGGCTCAG------CTGATGTAAA 140
Query 144 TGTGGTCATGCTTCAGGAATCCCAAGTT--TGTGAAAAGCGTGCCAGCCAACAATTCTGTTACACAAATGTGCT 215
|||||||||||||||||||||||||||| |.|||| |.||||.||||||||||||||.|.|||||||||
Sbjct 141 TGTGGTCATGCTTCAGGAATCCCAAGTTGATATGAA-----TTCCAGTCAACAATTCTGTTATAAAAATGTGCT 209
Query 216 TATCCCAAAATGGCATGATATATGGACACGGATACAGATCCGAGTAAATAGTTCCAGATTGGTTCGAGTCACCC 289
|||||||||.|||||||||||||||||||||||||||.|.||.|||||||||||||..|||||.|||||.||||
Sbjct 210 TATCCCAAAGTGGCATGATATATGGACACGGATACAGGTTCGGGTAAATAGTTCCAAGTTGGTCCGAGTTACCC 283
Query 290 AGGTGGAGAATGAGGAGAAACTGAAGGAGCTAGAGCA------------------------------------- 326
|||||||.|||||||||||.|||||||||||||||||
Sbjct 284 AGGTGGACAATGAGGAGAAGCTGAAGGAGCTAGAGCAGTTTAGTATCTGGAACTTTTTTTCTTCTTTTTTAAAA 357
Query 327 -------------------------------------------------------------------------- 326
Sbjct 358 GAGAAATTGAATGACACCTATGTTAACGTGGGTCTGTACAGCACTAAAACCTGCCTCAAGGTTGAGATGATAGA 431
Query 327 -------------------------------------------------------------------------- 326
Sbjct 432 GAAGGACACCACGTACAGTGTCACTGTGACCCGGAGATTTGACCCCAAACTCTTCCTTGTTTTCCTCCTCGGAC 505
Query 327 ----------------------------------AAGTCAAATTTTCTACTACTCTACTGGGATGACTGTGGGA 366
.|||||||||||||||||.||.||||||||||.|||||||
Sbjct 506 TGACACTGTTTTTTTGTGGAGACTTGTTGAGCAGGAGTCAAATTTTCTACTATTCCACTGGGATGAGTGTGGGA 579
Query 367 ATTGTGGCCTCTCTGCTAATCATCATTTTTATACTATCTAAGTTTATGCCTAAGAAAAGTCCCATTTACGTCAT 440
||.|||||||||||..|||||.||||||||||..|.||||||||||||||.||||.|||.||||||||||||||
Sbjct 580 ATCGTGGCCTCTCTCTTAATCGTCATTTTTATGATCTCTAAGTTTATGCCCAAGAGAAGCCCCATTTACGTCAT 653
Query 441 CCTGGTGGGAGGCTGGTCTTTTTCTCTGTACCTCATTCAACTAGTTTTTAAAAATTTACAAGAGATCTGGAGGT 514
||||||.|||||||||||.||.|||||||||||||||||.|||||||||||.||||||||.|||||.||||||.
Sbjct 654 CCTGGTAGGAGGCTGGTCCTTCTCTCTGTACCTCATTCAGCTAGTTTTTAAGAATTTACAGGAGATATGGAGGA 727
Query 515 GTTACTGGCAGTATCTTTTAAGTTATGTCCTCACAGTTGGATTCATGAGTTTTGCAGTATGTTACAAGTATGGG 588
||||||||||.||||||.||||.||..|||||||||||||||||||||||||||||||.||.|||||.||||||
Sbjct 728 GTTACTGGCATTATCTTCTAAGCTACATCCTCACAGTTGGATTCATGAGTTTTGCAGTGTGCTACAAATATGGG 801
Query 589 CCCTTGGAGAATGAACGAAGTATCAACCTGCTGACCTGGACCTTGCAGCTGATGGGCCTGTGTTTCATGTATTC 662
|||.||||.|||||||||||.||.|||||||||||||||||..||||||||.||||||||.|..||||||||||
Sbjct 802 CCCCTGGAAAATGAACGAAGCATTAACCTGCTGACCTGGACGCTGCAGCTGCTGGGCCTGGGACTCATGTATTC 875
Query 663 TGGCATCCAGATACCACATATTGCCCTTGCCATTATCATCATTGCTCTTTGTACTAAGAACCTGGAACACCCTA 736
..|.||||||||.||.||..|||||.||||..|.|||.|||||||.||.||.|||||||||||||||.||||||
Sbjct 876 CAGTATCCAGATCCCGCACGTTGCCTTTGCTCTCATCGTCATTGCACTGTGCACTAAGAACCTGGAATACCCTA 949
Query 737 TTCAGTGGCTGTACATCACCTGCAGAAAGGTGTGTAAGGGAGCAGAAAAGCCTGTTCCCCCTCGTCTCCTGACA 810
|.||.|||||||.||.|||||.|||.
Sbjct 950 TCCACTGGCTGTGCAGCACCTACAGG------------------------------------------------ 975
Query 811 GAAGAAGAATATCGGATACAAGGAGAGGTAGAAACCCGAAAGGCTTTAGAGGAGCTCCGAGAATTTTGTAACAG 884
Sbjct 976 -------------------------------------------------------------------------- 975
Query 885 TCCAGACTGCTCTGCTTGGAAGACTGTTTCTCGAATCCAGTCTCCAAAAAGATTTGCTGACTTTGTGGAAGGCT 958
Sbjct 976 -------------------------------------------------------------------------- 975
Query 959 CTTCCCACCTCACGCCAAATGAAGTTTCTGTCCATGAGCAGGAGTATGGATTAGGGAGCATTATTGCCCAGGAT 1032
Sbjct 976 -------------------------------------------------------------------------- 975
Query 1033 GAAATCTATGAGGAAGCATCCTCTGAGGAGGAGGACTCATATTCTCGGTGTCCTGCTATCACACAGAACAACTT 1106
Sbjct 976 -------------------------------------------------------------------------- 975
Query 1107 TCTAACC 1113
Sbjct 976 ------- 975