Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02790
Subject:
XM_006521582.3
Aligned Length:
1316
Identities:
999
Gaps:
214

Alignment

Query    1  ------------------ATGGAGAAAAAGAAAATGGTAAC-------TCAGGGTAACCAGGAGCCGACAACAA  49
                              |||||..|..|       |||.|       .|||||||||||||||||.|||||||
Sbjct    1  ATGTATGGTGTATATTGCATGGATTATCA-------GTATCCTCTTGTCCAGGGTAACCAGGAGCCAACAACAA  67

Query   50  CTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGAG  123
            |||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.|||||||||||||||||.
Sbjct   68  CTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGTTCCCACCACCTCCACAAAATGGAATTCCCACAGAA  141

Query  124  TATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACCGGTGAGCATAACCTGACACTCTACGGAAGTACGCA  197
            |||||.||||||||||||||.||||||||||||||||||.||||.|||||||||||.||||||||.||||||| 
Sbjct  142  TATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACCAGTGAACATAACCTGACCCTCTACGGGAGTACGC-  214

Query  198  AGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTAC---GACAGAAGGTGGAGCA  267
            |||| ||.||.||.|||||.|||||.||||||||||..||.|||||||||||.||   ||||||||||||||||
Sbjct  215  AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACCAGAATGGATCTCTCACGCAGACAGAAGGTGGAGCA  288

Query  268  CAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGCA  341
            |||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||.||
Sbjct  289  CAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACGCCCAAGCGACTACA  362

Query  342  TGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAG  415
            |||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  363  TGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAG  436

Query  416  ATGTAGAAATAATCTTTAATGAACGTGGCTCTAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCA  489
            ||||.|||||||||||||||||.||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  437  ATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCA  510

Query  490  GACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCACG  563
            ||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  511  GACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCAACAGCACG  584

Query  564  TGTAATGACCAATAAGAAGATGGTCACACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTAT  637
            .||.||||||||.||||||||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.|
Sbjct  585  GGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGT  658

Query  638  ATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTA  711
            |||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||.|.
Sbjct  659  ATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTG  732

Query  712  TCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCTAC  785
            |||||||||||.||.||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||.||
Sbjct  733  TCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAAC  806

Query  786  TGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCC  859
            ||||||||||||||||||.||||||.|||||||||||.||||||||||||||||||||||.|||||||||||||
Sbjct  807  TGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCC  880

Query  860  GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTC  933
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  881  GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTC  954

Query  934  TAT---GGTG--GATATG---------CAGCCTA------------------------------CAGATATGCA  963
            |||   |.||  ||.|||         ||..|||                              |.||||| .|
Sbjct  955  TATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCTCTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-AA  1027

Query  964  CAGCCT--GCTACTGC--------------AACCGCA-----------GCCACCGCTGCTGCAGCCGCTGCAGC  1010
            ||| .|  |.||||||              ||   ||           ||||..|||       |.|.||    
Sbjct 1028  CAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATTGTGGTATGGGCCAGGGCT-------CGGGTG----  1086

Query 1011  CGC-----TTAC------------------AGTGAC----GGTTATGGCAGGG--TGT--ACACA---GCCGAC  1050
            .||     ||||                  ||.|||    .||||.||.|.||  |||  ||.||   |..|||
Sbjct 1087  GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTGTTAGGGTATGGAATGTTAACTCAAGTGGTGAC  1160

Query 1051  ---------CC---CTACCATGCCCTTGCCCCTGC-CGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTA---T  1108
                     ||   .|||||.|.|.|||...|||| ||||  ||| |.|.|||..||||||       ||   .
Sbjct 1161  TGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGCT--CTA-GTAATTGAGGCTGTG-------TACTTC  1224

Query 1109  ACCGAG---GTGGCTACAG-----------CCGATTTGCCCCCTAC------------  1140
            ||||||   |||| ||.||           |||.|.|   |||.|.            
Sbjct 1225  ACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT---CCCAAGAGAATGCTGGGA  1278

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