Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02860
- Subject:
- NR_027779.1
- Aligned Length:
- 1877
- Identities:
- 1269
- Gaps:
- 608
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAGCGCGGGGCGGGGCGGGCCGGTGCGCCTGGCAGTCGGCTGCGTACTCCTGCGAGCGCCGGAGAGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGAGGCGGGGCGAGGGCGCGGCTCGAGGCATCCCTGCAGGGCGCTCCTCCGAGTCCCTCGGCGCTCTGAGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGGGAAGAAGGAGGGGCCGGCGTCAGTGACGTCAGCGAGACCGAGGTGAGCGTGGGCGTTGCCAGTGGTGCT 222
Query 1 -------------------ATGGCAGGGAAAGTAAAATGGGTCACTGATATCGAGAAGTCAGTGCTGATCAATA 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGTCAGTGCCTATGGATTATGGCAGGGAAAGTAAAATGGGTCACTGATATCGAGAAGTCAGTGCTGATCAATA 296
Query 56 ACTTTGAAAAGAGAGGATGGGTCCAAGTGACAGAAAACGAGGACTGGAATTTTTACT----------------- 112
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACTTTGAAAAGAGAGGATGGGTCCAAGTGACAGAAAACGAGGACTGGAATTTTTACTGGCTCCTTGACCTTCCT 370
Query 113 -------------------------------------------------------GGATGAGTGTGCAAACCAT 131
|||||||||||||||||||
Sbjct 371 GAATTTCGGTACAGATCCTGTTTAAATGAGTTTCCTGACTTCAGAGTCTGAAAAGGGATGAGTGTGCAAACCAT 444
Query 132 CCGAAATGTGTTCAGCGTTGAAGCTGGATATCGGCTCTCAGATGACCAAATAGTCAACCATTTTCCAAACCACT 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCGAAATGTGTTCAGCGTTGAAGCTGGATATCGGCTCTCAGATGACCAAATAGTCAACCATTTTCCAAACCACT 518
Query 206 ATGAACTGACCCGGAAGGACCTGATGGTGAAGAACATCAAAAGATACAGGAAGGAGCTGGAGAAAGAAGGGAGT 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATGAACTGACCCGGAAGGACCTGATGGTGAAGAACATCAAAAGATACAGGAAGGAGCTGGAGAAAGAAGGGAGT 592
Query 280 CCTCTGGCAGAAAAAGATGAAAATGGAAAATACCTCTATCTGG------------------------------- 322
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTCTGGCAGAAAAAGATGAAAATGGAAAATACCTCTATCTGGGTTTGTGCGTCTTCCACCGGCTCATGTTTTC 666
Query 323 -ACTTTGTTCCAGTCACCTATATGCTGCCCGCTGACTACAACCTGTTTGTAGAGGAGTTCCGGAAGAGCCCGTC 395
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AACTTTGTTCCAGTCACCTATATGCTGCCCGCTGACTACAACCTGTTTGTAGAGGAGTTCCGGAAGAGCCCGTC 740
Query 396 CAGCACCTGGATCATGAAGCCTTGTGGCAAGGCCCAGGGAAAGGGCATCTTCCTTATCAACAAGCTCTCACAGA 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGCACCTGGATCATGAAGCCTTGTGGCAAGGCCCAGGGAAAGGGCATCTTCCTTATCAACAAGCTCTCACAGA 814
Query 470 TCAAAAAGTGGTCCCGGGACAGCAAGACATCTTCGTTTGTGTCTCAATCTAATAAGGAAGCCTACGTGATCTCT 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCAAAAAGTGGTCCCGGGACAGCAAGACATCTTCGTTTGTGTCTCAATCTAATAAGGAAGCCTACGTGATCTCT 888
Query 544 CTCTATATTAACAACCCGTTACTAATTGGCGGGAGGAAGTTCGACCTGCGCTTGTACGTTCTGGTGTCCACGTA 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTCTATATTAACAACCCGTTACTAATTGGCGGGAGGAAGTTCGACCTGCGCTTGTACGTTCTGGTGTCCACGTA 962
Query 618 CCGTCCACTGCGCTGTTACATGTACAAGCTTGGGTTTTGCCGGTTCTGCACAGTGAAATACACCCCGAGTACCA 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCGTCCACTGCGCTGTTACATGTACAAGCTTGGGTTTTGCCGGTTCTGCACAGTGAAATACACCCCGAGTACCA 1036
Query 692 GTGAGCTGGACAACATGTTCGTTCATCTCACCAACGTCGCCATCCAGAAACACGGGGAGGACTACAACCACATC 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGAGCTGGACAACATGTTCGTTCATCTCACCAACGTCGCCATCCAGAAACACGGGGAGGACTACAACCACATC 1110
Query 766 CATGGGGGCAAGTGGACAGTGAGTAACCTGCGGCTCTACCTGGAGAGCACCCGCGGCAAGGAGGTGACCAGCAA 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CATGGGGGCAAGTGGACAGTGAGTAACCTGCGGCTCTACCTGGAGAGCACCCGCGGCAAGGAGGTGACCAGCAA 1184
Query 840 GCTGTTCGACGAGATCCACTGGATCATCGTGCAGTCCCTGAAGGCTGTGGCGCCGGTGATGAACAATGACAAGC 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCTGTTCGACGAGATCCACTGGATCATCGTGCAGTCCCTGAAGGCTGTGGCGCCGGTGATGAACAATGACAAGC 1258
Query 914 ACTGCTTTGAATGCTATGGCTACGACATCATCATCGACGACAAGCTGAAGCCCTGGCTGATCGAGGTGAATGCG 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACTGCTTTGAATGCTATGGCTACGACATCATCATCGACGACAAGCTGAAGCCCTGGCTGATCGAGGTGAATGCG 1332
Query 988 TCCCCGTCTCTCACGTCCAGCACTGCCAATGACCGAATCCTCAAGTACAACCTGATTAATGACACCCTCAACAT 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCCCCGTCTCTCACGTCCAGCACTGCCAATGACCGAATCCTCAAGTACAACCTGATTAATGACACCCTCAACAT 1406
Query 1062 CGCCGTCCCGAATGGTGAAATCCCAGACTGCAAATGGAACAAGTCGCCACCTAAGGAAGTCCTCGGCAATTACG 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGCCGTCCCGAATGGTGAAATCCCAGACTGCAAATGGAACAAGTCGCCACCTAAGGAAGTCCTCGGCAATTACG 1480
Query 1136 AGATTCTGTATGATGAAGAATTGGCCCAGGGTGACGGGGCTGACCGGGAGCTGAGAAGCCGTCAGGGTCAGTCT 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGATTCTGTATGATGAAGAATTGGCCCAGGGTGACGGGGCTGACCGGGAGCTGAGAAGCCGTCAGGGTCAGTCT 1554
Query 1210 CTGGGGCCCAGAGCAGGCCGATCGAGAGACTCGGGGAGAGCGGTCCTCACCACCTGGAAG-------------- 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTGGGGCCCAGAGCAGGCCGATCGAGAGACTCGGGGAGAGCGGTCCTCACCACCTGGAAGTGAGTCCCACCTGG 1628
Query 1270 -------------------------------------------------------------------------- 1269
Sbjct 1629 ACCTTATCAAAACTACTCACTCCACCTGGGCCCCTGCTGAAGCCCTATTTTGAAATTTCCCTTTTGTAGAGCTT 1702
Query 1270 -------------------------------------------------------------------------- 1269
Sbjct 1703 TTTTCCTTTCCTAAGCCCTGTAAATAAACGAAGGCACTTCTTTGGAAGGTTATGGAGTCTGTTTGACTAGTGCT 1776
Query 1270 -------------------------------------------------------------------------- 1269
Sbjct 1777 AAAGGAAACAATTCATGCGGATGTATAAAACTCGCTCTTTTTTTTTTAATTTTTAACCTAAGCAGAATTTTCAT 1850
Query 1270 --------------------------- 1269
Sbjct 1851 ATTAAAAACTCACTTTTTTGACAGAAA 1877
