Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02872
- Subject:
- XM_006511511.3
- Aligned Length:
- 1924
- Identities:
- 1065
- Gaps:
- 770
Alignment
Query 1 ------------------------------AT------------GGAAGTAACAGCTAGCAGTCGCCACTATGT 32
|| |||.||||||||||||||||||||||||||
Sbjct 1 ATGGCGTGCCTGTTGGAGACCCCAATCCGCATGAGCGTCCTCTCGGAGGTAACAGCTAGCAGTCGCCACTATGT 74
Query 33 TGACAGGCTATTTGACCCTGATCCCCAGAAAGTTCTACAAGGTGTCATAGACATGAAAAATGCTGTAATTGGAA 106
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 75 TGACAGGCTATTTGACCCTGATCCCCAGAAAGTTCTCCAAGGTGTCATAGACATGAAAAATGCTGTAATTGGAA 148
Query 107 ACAACAAGCAGAAAGCCAATCTCATTGTTTTAGGAGCTGTTCCAAGATTGTTGTACTTGCTTCAGCAAGAAACC 180
||||.||.|||||||||||.|||||.|||.|||||||.|||||||||||||||||.||||||||.|||||||||
Sbjct 149 ACAATAAACAGAAAGCCAACCTCATCGTTCTAGGAGCGGTTCCAAGATTGTTGTATTTGCTTCAACAAGAAACC 222
Query 181 TCAAGCACAGAGCTGAAAACTGAATGTGCAGTGGTGTTGGGAAGTCTTGCTATGGGTACTGAAAACAATGTCAA 254
|||||.||||||||||||||||||||||||||||||||.||.||||||||.|||||.||.||||||||||||||
Sbjct 223 TCAAGTACAGAGCTGAAAACTGAATGTGCAGTGGTGTTAGGGAGTCTTGCGATGGGCACAGAAAACAATGTCAA 296
Query 255 GTCTCTACTGGACTGCCATATTATCCCTGCCTTATTGCAAGGACTACTGTCCCCAGACCTGAAGTTTATTGAAG 328
|||||||||.||||||||||||||||||||||||.|.|||||||||||||||||||||||||||||.|||||||
Sbjct 297 GTCTCTACTAGACTGCCATATTATCCCTGCCTTACTACAAGGACTACTGTCCCCAGACCTGAAGTTCATTGAAG 370
Query 329 CTTGCCTCCGATGCCTGCGTACCATCTTCACCAGTCCTGTCACTCCAGAGGAGCTACTGTATACAGATGCCACA 402
||||||||||||||||.||.||.|||||||||||.|||||||||||||||||||||||||||||||||||.||.
Sbjct 371 CTTGCCTCCGATGCCTCCGGACAATCTTCACCAGCCCTGTCACTCCAGAGGAGCTACTGTATACAGATGCTACG 444
Query 403 GTGATACCACACCTCATGGCACTGCTTAGCAGGTCCCGCTATACCCAGGAGTACATCTGTCAGATCTTCTCACA 476
||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||.||||||||||||||
Sbjct 445 GTGATACCACACCTCATGGCACTGCTGAGCAGGTCCCGCTACACCCAGGAGTATATCTGCCAGATCTTCTCACA 518
Query 477 CTGCTGTAAAGGGCCAGATCATCAAACAATTTTATTTAACCACGGTGCAGTTCAGAATATTGCTCACCTACTAA 550
|||.||.||||||||||||||||||||||||||.||||||||.||.|||||.|||||.||||||||.||.||||
Sbjct 519 CTGTTGCAAAGGGCCAGATCATCAAACAATTTTGTTTAACCATGGGGCAGTGCAGAACATTGCTCATCTCCTAA 592
Query 551 CCTCACTGTCCTACAAAGTTCGAATGCAAGCACTGAAATGTTTCTCAGTTTTAGCTTTTGAAAACCCCCAGGTA 624
||||||..||.|||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.|||||.|||
Sbjct 593 CCTCACCCTCTTACAAAGTTCGAATGCAAGCACTGAAATGCTTCTCTGTTTTAGCCTTTGAGAATCCCCAAGTA 666
Query 625 TCGATGACCCTGGTAAATGTTTTGGTTGATGGAGAATTGTTACCACAGATTTTTGTGAAGATGTTACAGAGGGA 698
|||||||||||||||||.||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||
Sbjct 667 TCGATGACCCTGGTAAACGTTTTGGTTGATGGGGAGTTGTTACCACAGATATTTGTGAAGATGTTACAGAGGGA 740
Query 699 TAAGCCTATTGAGATGCAGCTCACATCAGCAAAATGTTTAACTTACATGTGTAGAGCTGGAGCAATTCGGACAG 772
||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.||||
Sbjct 741 TAAGCCTATTGAGATGCAGCTCACGTCAGCAAAATGTTTAACTTACATGTGCAGAGCTGGAGCAATTCGCACAG 814
Query 773 ATGATAACTGTATTGTATTAAAGACATTACCTTGTTTGGTTCGAATGTGCAGTAAGGAGAGATTACTAGAGGAG 846
||||.|.|||||||||||||||.||.||.||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 815 ATGACAGCTGTATTGTATTAAAAACTTTGCCTTGTTTGGTTCGAATGTGCAGTAAGGAGAGGTTACTAGAGGAG 888
Query 847 AGAGTTGAAGGAGCTGAGACACTTGCCTATCTGATTGAACCAGATGTTGAGCTACAGAGAATCGCTAGCATAAC 920
||||||||||||||||||||.||.||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 889 AGAGTTGAAGGAGCTGAGACCCTCGCCTATCTGATTGAGCCAGATGTTGAGCTGCAGAGAATCGCTAGCATAAC 962
Query 921 TGATCACCTCATTGCCATGCTTGCTGATTATTTCAAGTATCCCAGCTCAGTGAGTGCCATCACTGATATTAAAA 994
.||.|||||||||||||||||.|||||.||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct 963 CGACCACCTCATTGCCATGCTGGCTGACTATTTCAAGTATCCCAGCTCAGTGAGCGCCATCACTGACATTAAAA 1036
Query 995 GGCTTGATCATGATTTAAAACATGCTCACGAACTCCGCCAGGCTGCATTCAAGCTCTATGCCTCTCTTGGAGCA 1068
|||||||||||||.|||||||||||.||.||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1037 GGCTTGATCATGACTTAAAACATGCCCATGAGCTCCGCCAGGCTGCGTTCAAGCTCTATGCCTCTCTTGGAGCA 1110
Query 1069 AATGATGAAGACATCCGGAAGAAG---------------------------------GTGA-------GTCTGG 1102
|||||||||||||||||||||||| |||| |||||.
Sbjct 1111 AATGATGAAGACATCCGGAAGAAGATCATTGAGACTGAAACTATGATGGACCGAATTGTGACTGGCTTGTCTGA 1184
Query 1103 G---AG-----AGGGGCG----------------------------TCCCCCAGTCCTG----ACAG------- 1129
| || |||.||| |...||||..||| ||||
Sbjct 1185 GTCTAGTGTCAAGGTGCGGTTAGCTGCTGTCAGATGTTTGCACAGTTTATCCAGATCTGTACAACAGCTTCGAA 1258
Query 1130 CCAG----CAGG--CAGGGAGTGACGTCAACC------------------------------------------ 1155
|||| |||| ||.|..||| .|..||||
Sbjct 1259 CCAGTTTCCAGGATCATGCGGTG-TGGAAACCTTTAATGAAGGTTTTACAAAATGCACCCGATGAAATCCTAGT 1331
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1332 AGTAGCATCTTCCATGTTATGTAACCTTCTTCTTGAATTTTCTCCAAGTAAAGAGCCAATTTTGGAATCAGGAG 1405
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1406 CTGTCGAGCTGCTCTGTGGGTTGACACAGAGTGAAAACCCTGCTCTACGAGTGAATGGGATTTGGGCTTTAATG 1479
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1480 AATATGGCATTTCAGGCGGAACAAAAAATAAAAGCAGATATTTTACGAAGTCTGAGTACTGAACAGTTATTCCG 1553
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1554 GTTATTGTCAGATTCTGATATGAATGTGCTGATGAAGACATTGGGGCTTCTTAGAAATCTCCTCTCCACTCGGC 1627
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1628 CTACCCTGTGCATCCTAGCCAACATTGCAGATGGGACAACAGCAAAAGAGCTTATTATGACCAATGATGACATC 1701
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1702 CTGCAGAAAATCAAATATTACATGGGTCATTCACATGTCAAACTGCAGCTTGCTGCCATGTTTTGTATATCAAA 1775
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1776 CCTCATATGGAACGAAGAGGAAGGTTCACAGGAACGCCAGGATAAATTACGAGACATGGGGATTGTAGATATTC 1849
Query 1156 -------------------------------------------------------------------------- 1155
Sbjct 1850 TACACAAACTGAGTCAGTCGGCAGACTCAAACCTCTGTGACAAGGCAAAGACGGCGCTGCAGCAGTACCTGGCG 1923
