Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02903
Subject:
XM_017014597.2
Aligned Length:
1621
Identities:
964
Gaps:
596

Alignment

Query    1  ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTC-GT  221
            |||       |||             ||||.|.|||||           ||  |||   |..||..||||| ||
Sbjct    1  ATG-------TGG-------------CCCGGGCTGCAG-----------GA--AAG---CATCTCACCCTCAGT  38

Query  222  CTCCAACGGCTG--CTACGAGGGCA---GCCTC--TCAGAG--GAGCCCAGCATTAGGAA-GCCCGCAGGCGAG  285
            |        |||  ||.||||||||   |.|||  ||.|.|  |.|.|||||   ||.|| ||||         
Sbjct   39  C--------CTGCACTCCGAGGGCACGTGTCTCTGTCTGGGCTGGGGCCAGC---AGCAAGGCCC---------  92

Query  286  GGCCCTCAGC--CTCGAGTGTACAC-CA----TCTCTGGGGAGC----CTGCCC--------TGCTGCCCAGCC  340
              |||||..|  |||.|.|   ||| ||    |.||||||.|||    .|||||        ||.||    |.|
Sbjct   93  --CCCTCCCCCACTCCAAT---CACACAGATGTGTCTGGGAAGCTTTTTTGCCCGTTTTGGATGTTG----GGC  157

Query  341  CTGAGGCGGAGGCCA---TTGAGCTGGCGGTGGTGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAG  411
            || .|||.|.|.|||   ||          |||||.|||.|.||                         .||.|
Sbjct  158  CT-TGGCAGGGTCCAAAGTT----------TGGTGGAGGAGAGG-------------------------ACCTG  195

Query  412  CCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCA  485
            ||||||           .||||||             |||  |||.|   .||||||                 
Sbjct  196  CCCCTG-----------AGGTGGC-------------TCA--AGGAC---ACAGAGC-----------------  223

Query  486  GGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCTGGCTCCT----GGCCCCACCCCTCGGGCCTTTGGGCTGGAC  555
                    |||||                ||..|||||||    |.|||||.|||    ||| .||||.|||..
Sbjct  224  --------AGGAG----------------AGGGGGCTCCTGCAGGCCCCCAGCCC----GCC-ATGGGGTGGTG  268

Query  556  CAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGA  629
            |||.||          .||.|.|||.||         .||||.||.|.|.|  |||                  
Sbjct  269  CAGACA----------GGAGCCCCGCTC---------TGCTGCAGCGCAGG--CAG------------------  303

Query  630  CGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAG  703
                             .||||.|||                  .||.|||                       
Sbjct  304  -----------------GCTGGATCC------------------TCTGCCA-----------------------  319

Query  704  CGGTGTTCAGGGGCTACGCGGAGAGGAAGCGCCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAAC  777
                   ||.||||        |.|||.||.|.||                  ||               ||||
Sbjct  320  -------CATGGGC--------GTGGAGGCTCAGG------------------GC---------------GAAC  345

Query  778  TTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAG  851
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct  346  TTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAG--------------------------  393

Query  852  CTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACC  925
                                                                            ||||||||||
Sbjct  394  ----------------------------------------------------------------AGCAGTGACC  403

Query  926  TGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCT  999
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  404  TGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCT  477

Query 1000  GTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTA  1073
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  478  GTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTA  551

Query 1074  CATCCCCACTATCATCCGCCGGGATGACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCG  1147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  CATCCCCACTATCATCCGCCGGGATGACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCG  625

Query 1148  AGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATT  1221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  626  AGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATT  699

Query 1222  TTCTGCCAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGA  1295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  700  TTCTGCCAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGA  773

Query 1296  AGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCC  1369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  774  AGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCC  847

Query 1370  ACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACT  1443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  848  ACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACT  921

Query 1444  CCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGA  1517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  922  CCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGA  995

Query 1518  CTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1584
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  996  CTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1062