Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02948
- Subject:
- NR_149726.1
- Aligned Length:
- 2837
- Identities:
- 1104
- Gaps:
- 1574
Alignment
Query 1 ----------------------------------------------------------------ATGGCGGCCA 10
|||||.|||.
Sbjct 1 GGTTCGGGCGGCGGGGGCGGGGGCGGGGCCGGGGTGGTGCCAAGGCTGCAGCGGGCCGGGCAAGATGGCTGCCG 74
Query 11 TGGAGACCGAGACGGCGCCGCTGACCCTAGAGTCGCTGCCCACCGATCCCCTGCTCCTCATCTTATCCTTTTTG 84
|.|||.|||||||||.||.|||||||||.|||||||||||||||||.||.|||||.||||||||||||||..||
Sbjct 75 TAGAGGCCGAGACGGGGCTGCTGACCCTGGAGTCGCTGCCCACCGACCCTCTGCTGCTCATCTTATCCTTCGTG 148
Query 85 GACTATCGGGATCTAATCAACTGTTGTTATGTCAGTCGAAGACTTAGCCAGCTATCAAGTCATGATCCGCTGTG 158
|||||..||||.||||||||.|||||.|||||.||||||||||||||||||||.||||.|||||||||.|||||
Sbjct 149 GACTACAGGGACCTAATCAATTGTTGCTATGTTAGTCGAAGACTTAGCCAGCTTTCAACTCATGATCCACTGTG 222
Query 159 GAGAAGACATTGCAAAAAATACTGGCTGATATCTGAGGAAGAGAAAACACAGAAGAATCAGTGTTGGAAATCTC 232
||||||||||||||||||||||||||||||||||||||||||.|||.|...|||||.||||||.||||.|||.|
Sbjct 223 GAGAAGACATTGCAAAAAATACTGGCTGATATCTGAGGAAGAAAAAGCCGGGAAGAGTCAGTGCTGGAGATCCC 296
Query 233 TCTTCATAGATACTTACTCTGATGTAGGAAGATACATTGACCATTATGCTGCTATTAAAAAGGCCTGGGATGAT 306
||||||||||.||.|||||.||.||.||.||.|||||.||||||||.||.||.|||||||||||||||..|||.
Sbjct 297 TCTTCATAGAGACCTACTCAGACGTGGGGAGGTACATCGACCATTACGCCGCCATTAAAAAGGCCTGGCGTGAC 370
Query 307 CTCAAGAAATATTTGGAGCCCAGGTGTCCTCGGATGGTTTTATCTCTGAAAGAGGGTGCTCGAGAGGAAGACCT 380
||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.|||||||||||
Sbjct 371 CTCAAGAAGTACTTGGAGCCCAGGTGTCCTCGGATGGTTTTATCTCTGAAAGAGGGCGCACGTGAGGAAGACCT 444
Query 381 CGATGCTGTGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATTATCGATGTTCATACCGAATTCACAATGGAC 454
.||||||||.|||||.|||||.||.||||||||.||.||.||||||||.|||||||||||.||.|||||.||.|
Sbjct 445 GGATGCTGTCGAAGCTCAGATCGGTTGCAAGCTCCCGGATGATTATCGCTGTTCATACCGGATCCACAACGGGC 518
Query 455 AGAAGTTAGTGGTTCCTGGGTTATTGGGAAGCATGGCACTGTCTAATCACTATCGTTCTGAAGATTTGTTAGAC 528
|.|||||||||||.||.|||||..|||||||.|||||||||||.||||||||.||.|||||||||.|..||||.
Sbjct 519 AAAAGTTAGTGGTGCCGGGGTTGCTGGGAAGTATGGCACTGTCCAATCACTACCGCTCTGAAGATCTACTAGAT 592
Query 529 GTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTTTTTGCATACA 602
||.|||||.|||||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 593 GTTGATACTGCTGCAGGAGGATTTCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACCTTTTGCATACA 666
Query 603 TACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGTTTTCTACCAATGTC 676
.||.||.|||||||||||||||||.|||||.|||||||||||.||.||.||.||.|||||.|||||||||||||
Sbjct 667 CACCGGCTTGAGTCAGTACATAGCTGTGGAGGCTGCAGAGGGGCGGAATAAGAACGAAGTGTTCTACCAATGTC 740
Query 677 CAGACCAAATGGCTCGAAATCCAGCTGCTATTGACATGTTTATTATAGGTGCTACTTTTACTGACTGGTTTACC 750
||||||||||||||||.|||||.||||||||||||||||||||.|||||||||||||||||.|||||||||||.
Sbjct 741 CAGACCAAATGGCTCGGAATCCTGCTGCTATTGACATGTTTATCATAGGTGCTACTTTTACCGACTGGTTTACA 814
Query 751 TCTTATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATGTTCACGATCC 824
||.||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||||||.||||.|||||
Sbjct 815 TCCTATGTCAACAATGTTGTATCAGGTGGTTTCCCCATCATCAGAGACCAGATTTTCAGATATATTCATGATCC 888
Query 825 AGAATGTGTAGCAACAACTGGGGATATTACTGTGTCAGTTTCCACATCGTTTCTGCCAGAACTTAGCTCTGTAC 898
|||||||||.|||||||||||.||||||||.||.|||||.|||||||||||||||||||||||.||||||||.|
Sbjct 889 AGAATGTGTGGCAACAACTGGAGATATTACAGTTTCAGTGTCCACATCGTTTCTGCCAGAACTCAGCTCTGTGC 962
Query 899 ATCCACCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGCACTTCCTGAGAAGGCCTGT 972
||||.||.|||||||||||||||||||||||||
Sbjct 963 ATCCGCCACACTATTTCTTCACATACCGAATCA----------------------------------------- 995
Query 973 CAGTTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTTCAAGGACCTGGAGTAGT 1046
Sbjct 996 -------------------------------------------------------------------------- 995
Query 1047 TGGTGAATTTCCAATCATCAGCCCAGGTCGGGTATATGAATACACAAGCTGTACCACATTCTCTACAACATCAG 1120
||||||||||||||.||.||||||||||||.||||||||||||||||||||||||||||.|||||||||||||
Sbjct 996 -GGTGAATTTCCAATTATTAGCCCAGGTCGGATATATGAATACACAAGCTGTACCACATTTTCTACAACATCAG 1068
Query 1121 GATACATGGAAGGATATTATACCTTCCATTTTCTTTACTTTAAAGACAAGATCTTTAATGTTGCCATTCCCCGA 1194
|.|||||||||||.|||||.||||||||||||||.||||||||.||||||.||||||||||||||||.||||||
Sbjct 1069 GCTACATGGAAGGGTATTACACCTTCCATTTTCTGTACTTTAAGGACAAGGTCTTTAATGTTGCCATCCCCCGA 1142
Query 1195 TTCCATATGGCATGTCCAACATTCAGGGTGTCTATAGCCCGATTG------------GAAATGGGT---CCTGA 1253
|||||.||||||||||||||||||||||||||||||||.|||||| .|.|||.|| || |
Sbjct 1143 TTCCACATGGCATGTCCAACATTCAGGGTGTCTATAGCTCGATTGCCTCCCAAGTGCTAGATGTGTGCACC--A 1214
Query 1254 TGAATA----TGAAGAGA----------TGG--AAGA--AGAGGAGGA-----------GG-------AGGA-- 1289
||..|| .||..||| ||| ||.| |||..| || || ||.|
Sbjct 1215 TGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCA-GACTTCCATTCTTGGTTAGCCCAGAACC 1287
Query 1290 -AGAGGAGGAAGACGAGG----AT--GATGATTCAGCAGATATGGATGA-----ATCAGATGAAGATGAT---G 1348
|.|.||| ||.|| || .||..|| |.||||.||| ||||| |||||.|| | |
Sbjct 1288 TATATGAG-----CGTGGTACCATCCTATCCTT------AAATGGTTGATACTCATCAG-TGAAGCTG-TCTGG 1348
Query 1349 AAGAGGAG------AGACGGAGGAGA--------------------GTCTTTGAT-------GTTCCCATTCGC 1389
||..|||| ..|.|| |||.| .|||||.|| .||.|.||||
Sbjct 1349 AACTGGAGTTTGCTTTATGG-GGAAAATTTAAAATATGGACTTAATTTCTTTAATACATATATTTTCTATTC-- 1419
Query 1390 AGACGCCGCTGCTCACGCCTTTTT-------------------------------------------------- 1413
|..|||.||
Sbjct 1420 ---------------CATCTTGTTTCAGTTTTGGTAATTTGTGCCTTTCATGAAATTTGTTCATTTCATCTAAT 1478
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1479 GTTGAATTTATTAGCATAAAGTTATTTACAATATTCTGTTGATATCCCTTTAATGGCTATAAGAGCTGTAGTCA 1552
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1553 GATAACCTTCTTTTATCCTTAATATTGGTGATTTATATCTTTTTTTTAGCCACATTTCTATTGATCACTCAAAA 1626
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1627 GGAACAACATTTTGTTTTGATGGATTTTCTGTAGTTTGATTTTTTTTTCTATTTCAGCTCTTGGTGCAGTTGTC 1700
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1701 TTTATTTCTCTTCTTTACCTTGGGTTAAATTCACTTTTCTTGTAGCTTTTAAAGGTAGAAGTGTAGATTATTGA 1774
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1775 TTGTAGACCTTTCCTGTTTCTAAGCACTGTTCTAGCTGTATTGTACAAATTTTGATATATTTTGGTTAATATTT 1848
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1849 AGTTCAAAATACTCAAGATTTCCCTTGTAACTGACTTACGACTGCATAGAAATATGTTAATTTTCAAGTGTTTG 1922
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1923 GAAGATTTTAGTTATCTTTTGCTTACTGAGTTTTAATATTATTGTGGTTAGAGAACTTACTTTGTATTGCTAAT 1996
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1997 ATTTTTTAATGTTTTATGACCCCAAATTATGTGAAGAATTTCTATATCTTGATAAATGATCTTTGTGTCTTTGA 2070
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2071 AAAGAATGTATATTCTACCATGTGAGAATTTATTCTATGACAGGCCAAGCTGACTGATTGTTTGACAATGTTTG 2144
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2145 CCAAGTCATCTGTATATTTATTGTTCTTTTTTTTAAACTTTTGTTACTTCAGCCATTGAAGAGATTATTGTTGA 2218
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2219 AATCTTTAGTTAATGGCTTTGTCCATTGATTACTTTATTCTTGTTATATATCTGCCTCATGCATTTTGAAGTGA 2292
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2293 TATAATTGTGTGCCAGTGCTTAGGATTGTTGTCTGTTTATGGAAGTAGTTCTTTGATTCTTATTCAGCTTTACT 2366
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2367 TACATTCCTTGTCCTAAGTTAAGAGCATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGA 2440
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2441 TGCTTTTGTTGCTTGTCTTTACTGTTTGTTTCAGTGGATGTAAAGTACGGGCTTTACTAAAAGGCAGTGGTTCT 2514
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2515 CAAGCCTTTGGGTTTCCTCACCTCCTTAGATGTATAAAAACCATTGATGCCTAAGAACCTGTTTACATGGTCAT 2588
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2589 GTCAGTATGTACCATATCAGAAATTCAAATAGGACATTTATAAAAGTATCAGTTCCTTTTAAAACTACAATAAA 2662
Query 1414 ------------------------- 1413
Sbjct 2663 TAAACCCTTTACATGTTCAACCCTC 2687
