Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03093
- Subject:
- NR_149013.2
- Aligned Length:
- 2308
- Identities:
- 609
- Gaps:
- 1699
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCTGCGACGCCCCTGCAGCAGCAGCAGCGTGGTCAGAGCGAGCTTCTGAGCGGTGGTTCATCTGCGTTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTAAATGGGACTGTTTCATTATTTTGATGGCTGAAGAATATTTCCTAGTGTATGTATATGAGAGTTTCTTGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTTTATCTGTGGATGAACAGCTACTTTGAAATATATGATACATTTGTGTTAAGGCTAGTCACGCTGCTGTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATAGAAGGCCAGAATTGATCACTATCATCTGAGAGTAACTTTGTACCCATCACTGATTCCTTCCGAGACTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCACTTCCCCAGCAGCCTCTGATTTCTTCATGTGGCTGCAGATGGCAGGATTTCCCAAAGGTTTATGGCTGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACATATTCCGTGGTGTATCTGTACAGCAGTTTCCTCATTCCTGCAGCTGTGTTTGAACAGGTCATTTACCATGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTCCTCCAGGTTCAACAGTATGGCTCCAAATGATGAAATTTCATTCTGATTTTCTGGCTGAAGACTATTCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGTGTATGTCCACCACAGTTACTTTATCCCTTCATCTGTGGATGGGCAGTTGGTTGGCAGAGAATTTGAACTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGATGAACTTTATTATCCAGGATGCTGAGAGTATAACATGCATGACAGAGCTTTTAGAGCACTGTGATGTAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGTCAAGCAGAAATAGGGAGCATGTTTACAGCCATTCTATGAAAAAGTGTTCGGAATGTACAGACTAGCACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCTGGACTAATTGAACAAGTATTGCTGAAAATGAGTGCTGTAGATGACATGATAGCAGTGGTACATGATCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATTGTCCACATTTACAATCGATGGAGAAACAGTGAAATTCAGTGTTATGTTAATGGACAACTGGTATCTTATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGATATGGCTTGGCATGTTAACACAAATGACAGCTATGACAAGTGCTTTCTTGGATCATCAGAAACTGCTGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCAAATAGGGTATTCTGTGGTCAACTTGGTGCCGTGTATGTGTTCAGTGAAGCACTCAACCCAGCACAGATATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCAATTCATCAGTTAGGACCTAGATATAAGAGTACCTTCAAGTTTAAATCTGAGAGTGATATTCATTTGGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACATCATAAACAGGTTTTGTATGATGGGAAACTTGCAAGTAGCATTACCTTTACATATACTGCTAAGGCCACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GATGCTCAACTCTGCCTGGAATCATCACCAAAAGAGAATGCATCAATTTTTGTGCATTCCCAACATGCTCTAAT 1258
Query 1 --------------------------------------------------------ATGACAGTCAAGTGGAAA 18
||||||||||||||||||
Sbjct 1259 GCTTCAGATTCAAGTGCTTTTTCCACTGTTTCCCCAATTGGATAATCGGCAGCTCAATGACAGTCAAGTGGAAA 1332
Query 19 CAACTGTCTG---------------------------------------------------------------- 28
||||||||||
Sbjct 1333 CAACTGTCTGGGGCCTAATGTCCACCTAAGACGTGGTGTTCACCTGGGGTCTGATGTTCAGCTGAAGACTGGAT 1406
Query 29 -------------------------------------------------------------------------- 28
Sbjct 1407 GTCCACCTGGAGCTGAGGAATCCACCCAGGGACTGGTGTTGAACTGGGGCCTGATGACCACCGGGGGACAAGGT 1480
Query 29 ------------------------------------------CTCCTGCTTCAGGTGCAGAAATACAGCGATTT 60
||||||||||||||||||||||||||||||||
Sbjct 1481 ATCCACACCAGGCTTGATGTCCACCTGTCACCAGATGTCTACCTCCTGCTTCAGGTGCAGAAATACAGCGATTT 1554
Query 61 CCAGTGCCAGCTGTTGAGCCAGTGCCAGCACCAGGGGCAGATTCCCCTCCAGGGACAGCGCTGGAGCTAGAGGA 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCAGTGCCAGCTGTTGAGCCAGTGCCAGCACCAGGGGCAGATTCCCCTCCAGGGACAGCGCTGGAGCTAGAGGA 1628
Query 135 AGCTCCAGAGCCCTCCTGCCGCTGCCCTGGGACTGCCCAGGACCAGCCCAGTGAGGAGCTGCCTGACTTCATGG 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGCTCCAGAGCCCTCCTGCCGCTGCCCTGGGACTGCCCAGGACCAGCCCAGTGAGGAGCTGCCTGACTTCATGG 1702
Query 209 CACCTCCTGTAGAGCCACCGGCCTCAGCCCTGGAGCTGAAAGTGTGGCTGGAGCTAGAGGTGGCAGAGAGGGGT 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACCTCCTGTAGAGCCACCGGCCTCAGCCCTGGAGCTGAAAGTGTGGCTGGAGCTAGAGGTGGCAGAGAGGGGT 1776
Query 283 GGCCAGCACAGCTCCAGCCAGCAGCTCCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGCAGAG 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGCCAGCACAGCTCCAGCCAGCAGCTCCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGCAGAG 1850
Query 357 ACCAGGGTTTGCAATCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTCAGCAGAGCAGCAGCCCTG 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ACCAGGGTTTGCAATCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTCAGCAGAGCAGCAGCCCTG 1924
Query 431 CTGCTGAAGGGCCTGCTGCTACTGCTGCTGGGGCTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAG 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTGCTGAAGGGCCTGCTGCTACTGCTGCTGGGGCTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAG 1998
Query 505 GAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGACCTCCTCCTCCAGGCATGGAGGTTTG 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGACCTCCTCCTCCAGGCATGGAGGTTTG 2072
Query 579 CCCTCAGCTGGGCATCTGGGCCATTTGCCCC------------------------------------------- 609
|||||||||||||||||||||||||||||||
Sbjct 2073 CCCTCAGCTGGGCATCTGGGCCATTTGCCCCTAACGTGCTGCCCAGGATGGCCTCCTCTTGACAGGCGGACAGG 2146
Query 610 -------------------------------------------------------------------------- 609
Sbjct 2147 GGGTGAGGGGGCCAGGGGGCATCTCCAAAGGAAGCTTTTAAACTCAGCAGCTGCACCCCAGAATCTGTATGCCT 2220
Query 610 -------------------------------------------------------------------------- 609
Sbjct 2221 GCACCTGCCCAAGGATTTATTCATAGCTTACCTAAGAATTTCAAATTTCTACCATAACACTGAATAAAGTTTGA 2294
Query 610 -------------- 609
Sbjct 2295 CTTTTTGAAACTTC 2308
