Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03094
• Subject: XM_006531360.3
• Aligned Length: 1553
• Identities: 959
• Gaps: 448

Alignment

Query    1  ATGTACAAGATGAACATCTGCAACAAGCCCTCCAACAAGACGGCCCCTGAGAAGAGTGTGTGGACGGCACCGGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACAGCCCAGCGGACCCTCCCCTGAGCTGCAGGGCCAGCGATCCCGCCGGAATGGGTGGAGCTGGCCCCCTCACC  148
                                                                  .|||||||||||.||.||||
Sbjct    1  ------------------------------------------------------ATGGAGCTGGCCGCCCCACC  20

Query  149  CGCTCCAGATTGTGGCCTGGCTGCTGTACCTCTTCTTTGCTGTGATCGGCTTTGGGATCCTTGTTCCCCTCCTG  222
            |||||||||||||||||||||||||.|||||||||||.||                                  
Sbjct   21  CGCTCCAGATTGTGGCCTGGCTGCTCTACCTCTTCTTCGC----------------------------------  60

Query  223  CCTCACCACTGGGTGCCCGCTGGCTACGCTTGCATGGGCGCCATCTTTGCTGGCCACCTTGTGGTGCACCTGAC  296
                                                                                      
Sbjct   61  --------------------------------------------------------------------------  60

Query  297  CGCCGTCTCCATCGATCCAGCAGATGCCAACGTGCGGGACAAGAGCTATGCGGGGCCCCTGCCCATCTTCAACC  370
                                  ||||||||.|||||||||||||||||..|.||||||||||||||||||||||
Sbjct   61  ----------------------GATGCCAATGTGCGGGACAAGAGCTACTCTGGGCCCCTGCCCATCTTCAACC  112

Query  371  GAAGCCAGCACGCACATGTCATTGAAGACCTGCACTGCAACTTGTGCAACGTGGATGTGAGCGCTCGCTCCAAG  444
            |.||||||||.||.|||||||||||||||||||||||||||.|.|||.|||||||.|||||.||.||.|||||.
Sbjct  113  GCAGCCAGCATGCGCATGTCATTGAAGACCTGCACTGCAACCTATGCGACGTGGACGTGAGTGCGCGATCCAAA  186

Query  445  CACTGCAGCGCCTGCAACAAGTGCGTGTGCGGTTTCGACCACCACTGCAAGTGGCTCAACAACTGTGTGGGCGA  518
            |||||||||||||||||.||||||||.|||||.|||||.|||||.||||||||||||||||||||.||||||||
Sbjct  187  CACTGCAGCGCCTGCAATAAGTGCGTATGCGGCTTCGATCACCATTGCAAGTGGCTCAACAACTGCGTGGGCGA  260

Query  519  GCGGAACTACCGGCTCTTTCTACACAGTGTTGCATCCGCTTTACTGGGCGTCCTGCTCCTGGTGCTGGTGGCCA  592
            |.|||||||.||||||||||||||||||||.|||||.||||||.||||.|||||||||||||||||||||||||
Sbjct  261  GAGGAACTATCGGCTCTTTCTACACAGTGTGGCATCTGCTTTATTGGGTGTCCTGCTCCTGGTGCTGGTGGCCA  334

Query  593  CATATGTCTTCGTGGAGTTCTTTGTCAACCCCATGCGTCTGCGCACCAACCGACACTTTGAAGTCCTGAAGAAT  666
            |.|||||||||||||||||||||||||||||||||||.||.||.|||||||.|||||||||||||.|||||||.
Sbjct  335  CTTATGTCTTCGTGGAGTTCTTTGTCAACCCCATGCGACTTCGTACCAACCAACACTTTGAAGTCTTGAAGAAC  408

Query  667  CACACGGATGTGTGGTTCGTGTTCCTGCCTGCCGCCCCCGTGGAGACCCAGGCCCCTGCCATCCTGGCCCTGGC  740
            |||||||||||||||||.||||||.|||||||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct  409  CACACGGATGTGTGGTTTGTGTTCTTGCCTGCTGCCCCTGTGGAGACCCAGGCTCCTGCCATCCTGGCCCTGGC  482

Query  741  CGCCCTGCTCATCCTTCTGGGCCTCCTGTCCACAGCCCTCCTGGGGCACCTGCTCTGCTTCCACATTTATCTCA  814
            ||||||||||||||||||||||||.||.||.||||||||.||.||.||||||||||||||||||||||||||.|
Sbjct  483  CGCCCTGCTCATCCTTCTGGGCCTGCTTTCTACAGCCCTGCTTGGCCACCTGCTCTGCTTCCACATTTATCTAA  556

Query  815  TGTGGCACAAGCTCACCACCTATGAGTACATCGTGCAGCACCGCCCACCACAGGAGGCCAAGGGGGTTCACAGG  888
            |||||||||||||||||||||||||.|||||||||||||||||.|||.|.|||||.||.||||.|...||||.|
Sbjct  557  TGTGGCACAAGCTCACCACCTATGAATACATCGTGCAGCACCGTCCAGCTCAGGAAGCAAAGGAGACCCACAAG  630

Query  889  GAGCTCGAGTCATGTCCTCCCAAGATGCGGCCCATTCAGGAGATGGAGTTCTACATGCGGACCTTCAGACATAT  962
            |||||.||||||||.||.|.||||.|||||.||||||||||||||||||||||||||.||||||||||.|||.|
Sbjct  631  GAGCTGGAGTCATGCCCCCGCAAGGTGCGGTCCATTCAGGAGATGGAGTTCTACATGAGGACCTTCAGCCATGT  704

Query  963  GCGCCCAGAGCCCCCTGGCCAGGCCGGGCCAGCAGCAGTGAATGCCAAACACTCTCGCCCTGCCTCCCCGGATC  1036
            |||.|||||||||.||||||||||..||.||||||||.|.||||||||            |.|.||||.|..||
Sbjct  705  GCGTCCAGAGCCCTCTGGCCAGGCTAGGACAGCAGCATTAAATGCCAA------------TCCTTCCCAGTTTC  766

Query 1037  ---CGACCCCAGGTAGGAGGGACTGTGCTGGGCCTCCGGTCCAGGTGGAGTGGGATAGAAAGAAGCCTCTACCC  1107
               |.||||.|||                           |||.|||||       |..|     ||.||||||
Sbjct  767  TTGCCACCCAAGG---------------------------CCAAGTGGA-------ACCA-----CCACTACCC  801

Query 1108  TGGCGCTCGCCTCTGCTTCTTTTGGCGATGTGGGGCCCTCAGGCTCCCCCGTGTCTCTG---------------  1166
            |        |||                        ||||||.|.|.|   ||.|||||               
Sbjct  802  T--------CCT------------------------CCTCAGACACAC---TGGCTCTGCCTCCACGGATCCAA  840

Query 1167  ---CAGAAAAAGAGGAAGAGGCGCGTGTATAAAGTGCGAACGTCTGAGACCTCGGATCCG---GC---------  1225
               |||||||||||||||.||||.|||||||.|.|||..|.|||||.|..||.||| |||   ||         
Sbjct  841  CCCCAGAAAAAGAGGAAGCGGCGAGTGTATAGATTGCCCAGGTCTGGGGTCTTGGA-CCGAGAGCTCCCACTGC  913

Query 1226  ----GT--CGGG-GCCTAGGGCCCCCAGCCGCCGCTCCAGCTCGTCGACGGATTCCGCGGAC----GCCAGCCC  1288
                ||  |||| |.||.||.|.||.|||||||||||||||||.||..|.||||||    ||    ||||||||
Sbjct  914  CCAGGTTACGGGAGACTGGGACTCCTAGCCGCCGCTCCAGCTCTTCATCTGATTCC----ACCAGTGCCAGCCC  983

Query 1289  TGTGCACGCCGCTGGCCCTGCCGGCGCCTACCACTCGGCGTCGGCAGAGTCCGTGGACGAGATTCCAGTGGCGC  1362
            .|||||.||.|.||||.||||.|||||||||.|||||||.||.||.||||||.||||.||||||||||||||.|
Sbjct  984  AGTGCATGCTGGTGGCTCTGCAGGCGCCTACTACTCGGCATCAGCTGAGTCCATGGAAGAGATTCCAGTGGCCC  1057

Query 1363  AGACGCGCCTGGGCAGCGCCGCTCTGGCCGCCCCGCGGGGCC-GGGGCCGACAGCCCACGCTGGCGCGGCAGGC  1435
            ||||||||||||||||.|||||.||||..||||| .||.||| ||||.|||.||.|...||||||.|..|||||
Sbjct 1058  AGACGCGCCTGGGCAGTGCCGCACTGGGTGCCCC-AGGAGCCAGGGGTCGAGAGTCTGGGCTGGCTCTACAGGC  1130

Query 1436  GCGTGCGCCCGCCGTTTTCG-----------------------------------------------------  1455
            .|||.||||.||.|||||.|                                                     
Sbjct 1131  ACGTTCGCCTGCTGTTTTTGTGAGCCCGAGCAGTGGCGAGCCCGGAACACCTGGAGGCGGCGACGGCCTGCCT  1203