Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03217
• Subject: NR_001588.2
• Aligned Length: 1048
• Identities: 651
• Gaps: 354

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTTTTTGGGCGTGGAAAGATGGCGGTAAAAGCCACAATGCGCAGGCGTCATCGCTCACTTCTCCCCTCCCGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCTGCTCCACCTGACGCCTGCGCAGTAAGTAAGCCTGCCAGACACGCTGTGGCGGCTGCCTGAAGCTAGTGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCGCGGCGCCGCGCACTTGTGGTTGGGTCAGTGCCGCGCGCCGCTCGGTCGTTACCGCGAGGCGCTGGTGGCCT  222

Query    1  -------------------------------------------------------------ATGTCGATCTTCA  13
                                                                         |||||||||||||
Sbjct  223  TCAGGCTGGACGGCGCGGGTCAGCCCTGGTTTGCCGGCTTCTGGGTCTTTGAACAGCCGCGATGTCGATCTTCA  296

Query   14  CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGTGCCGGGAAGCGCTTCGAAATC  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||
Sbjct  297  CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGCGCCAGGAAGCGCTTCGAAATC  370

Query   88  GCCTGCTACAAAAACAAGGTCGTCGGCTGGCGGAGCGGCGTGGAAAAAGACCTCGATGAAGTTCTGCAGACCCA  161
            ||||||||||.||||||||||||||||||||||||||||.|||||||||||||.||||||||||||||||||||
Sbjct  371  GCCTGCTACAGAAACAAGGTCGTCGGCTGGCGGAGCGGCTTGGAAAAAGACCTTGATGAAGTTCTGCAGACCCA  444

Query  162  CTCAGTGTTTGTAAATGTTTCTAAAGGTCAGGTTGCCAAAAAGGAAGATCTCATCAGTGCGTTTGGAACAGATG  235
            |||||||||||||||||||||..||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  445  CTCAGTGTTTGTAAATGTTTCCTAAGGTCAGGTTGCCAAGAAGGAAGATCTCATCAGTGCGTTTGGAACAGATG  518

Query  236  ACCAAACTGAAATCTGTAAGCAGATTTTGACTAAAGGAGAAGTTCAAGTATCAGATAAAGAAAGACACACACAA  309
            |||||||||||||||        |||||||||||||||||||||||||||||||||    ||||||||||||||
Sbjct  519  ACCAAACTGAAATCT--------ATTTTGACTAAAGGAGAAGTTCAAGTATCAGAT----AAAGACACACACAA  580

Query  310  CTGGAGCAGATGTTTAGGGACATTGCAACTATTGTGGCAGACAAATGTGTGAATCCTGAAACAAAGAGACCATA  383
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  581  CTGGAGCAGATGTTTAGGGACATTGCAATTATTGTGGCAGACAAATGTGTGACTCCTGAAACAAAGAGACCATA  654

Query  384  CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTCGGTGAAAACCAACAAGAGTACAAAACAGC  457
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct  655  CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTTGGTGAAAACCAACAGGAGTACAAAACAGC  728

Query  458  AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCGGTTCATC  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  729  AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCAGTTCATC  802

Query  532  CTTCCAGTCAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTGAAGATTA  605
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  803  CTTCCAGTGAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTAAAGATTA  876

Query  606  TGGCCAACAGTTAGAAATCGTA--------------TGTCTGATTGACCCGGGCTGCTTCCGAGAAATTG-ATG  664
            ||||||||||||||||||||||              |.|.||.||.|       ||.|.||.|.|.|||| ||.
Sbjct  877  TGGCCAACAGTTAGAAATCGTAAGAGTCAAATATTTTCTTTGCTTCA-------TGTTACCTAAATATTGTATT  943

Query  665  AGCTAATAAAAAAGGAAACTAAAGGCAAAGGTTCTTTGGAAGTACTCAATCTGAAAGATGTAGAAGAAGGAGAT  738
            ..|||.|||.|||                      ||.|.||.|..||.||..|||.|...|.||.||      
Sbjct  944  CTCTAGTAATAAA----------------------TTTGTAGCAAACATTCAAAAAAAAAAAAAAAAA------  989

Query  739  GAGAAATTTGAA  750
               |||      
Sbjct  990  ---AAA------  992