Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03238
• Subject: XM_011240206.1
• Aligned Length: 1234
• Identities: 724
• Gaps: 419

Alignment

Query    1  ATGATGAAGAAGAACAATTCCGCCAAGCGGGGACCTCAGGATGGAAACCAGCAGCCTGCACCGCCCGAGAAGGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGGCTGGGTCCGGAAATTCTGCGGGAAAGGGATTTTCAGGGAGATTTGGAAAAACCGCTATGTGGTGCTGAAAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GGGACCAGCTCTACATCTCTGAGAAGGAGGTAAAAGATGAGAAAAATATTCAAGAGGTATTTGACCTGAGTGAC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TATGAGAAGTGTGAAGAGCTCCGGAAGTCCAAGAGCAGGAGCAAGAAAAATCATAGCAAGTTTACTCTTGCCCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTCCAAACAGCCCGGTAACACGGCACCCAACCTGATCTTCCTGGCAGTGAGTCCAGAAGAGAAGGAATCGTGGA  370
                                                                                     |
Sbjct    1  -------------------------------------------------------------------------A  1

Query  371  TCAATGCCCTCAACTCTGCCATCACCCGAGCCAAGAACCGTATCTTGGATGAGGTCACCGTTGAGGAGGACAGC  444
            |.|.||    ||.||||                                |.|||||||||||||||||||||||
Sbjct    2  TGAGTG----CATCTCT--------------------------------TCAGGTCACCGTTGAGGAGGACAGC  39

Query  445  TATCTTGCCCATCCCACTCGAGACAGGGCAAAAATCCAGCACTCCCGCCGCCCCCCAACAAGGGGACACCTAAT  518
            |||||||||||.||.|||||||||||.|||||||||||.|||||||||||.||.|||||..||||||||||.||
Sbjct   40  TATCTTGCCCACCCTACTCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGACACCTCAT  113

Query  519  GGCTGTGGCTTCCACCTCTACCTCGGATGGGATGCTGACCTTGGACTTGATCCAAGAGGAAGACCCTTCCCCTG  592
            ||||||||||||.|||||||||||.|||||||||||.||.||.|||.|||||||||||||||||||||||||||
Sbjct  114  GGCTGTGGCTTCGACCTCTACCTCAGATGGGATGCTAACATTAGACCTGATCCAAGAGGAAGACCCTTCCCCTG  187

Query  593  AGGAACCAACCTCTTGTGCTGAGAGCTTTCGGGTTGACCTGGACAAGTCTGTGGCCCAGCTGGCAGGGAGCCGG  666
            ||||.|||.|||||||||||||||||||.|||||.||.||||||||||||||||||||||||||.||.||.||.
Sbjct  188  AGGAGCCAGCCTCTTGTGCTGAGAGCTTCCGGGTCGATCTGGACAAGTCTGTGGCCCAGCTGGCTGGCAGTCGA  261

Query  667  CGGAGAGCGGACTCAGACCGCATCCAGCCCTC--CGCAGACCGGGCAAGCAGTCTCTCCCGACCTTGGGAAAAA  738
            ||||||||||||||||||.|.|||||||||||  |||||  |||||||||||.||.||.||.||||||||||||
Sbjct  262  CGGAGAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAG--CGGGCAAGCAGCCTTTCTCGGCCTTGGGAAAAA  333

Query  739  ACAGACAAAGGGGCCACCTACACCCCCCAGGCACCCAAGAAGTTGACGCCC----ACAGAGAAAGGCCGCTGCG  808
            .|||||||.||.|||.||||||||||.||.||||..||||||||    |||    ||||||||..||||.||.|
Sbjct  334  CCAGACAAGGGAGCCCCCTACACCCCACAAGCACTGAAGAAGTT----CCCCAGTACAGAGAAGAGCCGATGTG  403

Query  809  CCTCCCTGGAGGAGATCCTATCTCAGCGGGATGCTGCCTCTGCCCGCACCCTCCAGCTGCGGGCTGAGGAACCC  882
            ||||||||||||||||||||||.|||.||||..|||||.|.||||||.||||.||.||.|..|||||||||.||
Sbjct  404  CCTCCCTGGAGGAGATCCTATCCCAGAGGGACACTGCCCCAGCCCGCCCCCTTCACCTTCAAGCTGAGGAATCC  477

Query  883  CCAACCCCTG-CCCTCCCCAACCCGGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGGAGA  955
            |.|.|||||| ||||.||| |.||.|||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  478  CTACCCCCTGTCCCTGCCC-AGCCAGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGAAGA  550

Query  956  CTCAGGAGCTTCTGGCAGAGGTTCAGGGACTGGGAGATGGGAAGCGAAAGGCCAAGGACCCCCCTCGGTCTCCG  1029
            ||||||||||.|||||||||||||||||||||||.||.||.|||||.|||||||||||||||||.|.||||||.
Sbjct  551  CTCAGGAGCTGCTGGCAGAGGTTCAGGGACTGGGTGACGGCAAGCGGAAGGCCAAGGACCCCCCACAGTCTCCA  624

Query 1030  CCGGATTCTGAGTCAGAGCAGCTGCTGCTGGAGACGGAACGGCTGCTGGGAGAGGCATCATCGAATTGGAGCCA  1103
            ||.||.||.|||||.||||||||||||||||||||.||..||||||||||||||||.||.||.||.||||||||
Sbjct  625  CCCGACTCGGAGTCGGAGCAGCTGCTGCTGGAGACAGAGAGGCTGCTGGGAGAGGCTTCCTCCAACTGGAGCCA  698

Query 1104  GGCAAAGAGGGTGCTGCAGGAGGTCAGGGAGCTGAGAGACCTGTACAGACAGATGGACCTGCAGACCCCGGACT  1177
            |||||||||.|||||||||||.|||.||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  699  GGCAAAGAGAGTGCTGCAGGAAGTCCGGGAGCTGAGAGACCTGTACAGGCAGATGGACCTGCAGACCCCGGACT  772

Query 1178  CCCACCTCAGACAGACCACCCCGCACAGTCAGTACCGGAAGAGCCTGATG  1227
            |||||||||||||||||.|||.|||||||||.||||||||||||||||||
Sbjct  773  CCCACCTCAGACAGACCTCCCAGCACAGTCAATACCGGAAGAGCCTGATG  822