Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03298
- Subject:
- NR_158896.1
- Aligned Length:
- 2582
- Identities:
- 699
- Gaps:
- 1868
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTAGGTTCCCCGCCCCCTCGCCCGGCCCGGCGCCCACTAGCCACAGGGCCCGCTTCCCCCTGGAGATCAGC 74
Query 1 --------------------------------------------------------------------ATGG-C 5
.||| |
Sbjct 75 GCGCACTTCCCGAGCCCTCGTAGCACTCAGAGGTCGCATCCACACCTGGGATGCCTAGGGGGCGCCTCCTGGCC 148
Query 6 GCTTGTC------CCCTGC---------------------CAGGTGCTGCGGATGGCAATCCTGCTGTCTTACT 52
|..|||| |||||| .|||||||||||||||||||||||||||||||||
Sbjct 149 GGGTGTCCCGGGACCCTGCGAACGCAGGAGCAGAATGACGAAGGTGCTGCGGATGGCAATCCTGCTGTCTTACT 222
Query 53 GCTCTATCCTGTGTAACTACAAGGCCATCGAAATGCCCTCACACCAGACCTACGGAGGGAGCTGGAAATTCCTG 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTCTATCCTGTGTAACTACAAGGCCATCGAAATGCCCTCACACCAGACCTACGGAGGGAGCTGGAAATTCCTG 296
Query 127 ACGTTCATTGATCTGGTTATCCAGGCTGTCTTTTTTGGCATCTGTGTGCTGACTGATCTTTCCAGTCTTCTGAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACGTTCATTGATCTGGTTATCCAGGCTGTCTTTTTTGGCATCTGTGTGCTGACTGATCTTTCCAGTCTTCTGAC 370
Query 201 TCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGGACTGGATGTTAGCTG 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGGACTGGATGTTAGCTG 444
Query 275 TGTTGGCCTTTCCTGTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTATGACAGAGAGATGATA 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGTTGGCCTTTCCTGTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTATGACAGAGAGATGATA 518
Query 349 TACCCGAAGCTGCTGGATAATTTTATCCCAGGGTGGCTGAATCACGGAATGCACACGACGGTTCTGCCCTTTAT 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TACCCGAAGCTGCTGGATAATTTTATCCCAGGGTGGCTGAATCACGGAATGCACACGACGGTTCTGCCCTTTAT 592
Query 423 ATTAATCGAGATGAGGACATCGCACCATCAGTATCCCAGCAGGAGCAGCGGACTTACCGCCATATGTACCTTCT 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTAATCGAGATGAGGACATCGCACCATCAGTATCCCAGCAGGAGCAGCGGACTTACCGCCATATGTACCTTCT 666
Query 497 CTGTTGGCTATATATTATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTGGGTGTACCCTTTCCTGGAACAC 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGTTGGCTATATATTATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTGGGTGTACCCTTTCCTGGAACAC 740
Query 571 ATTGGCCCAGGAGCCAGAATCATCTTCTTTGGGTCTACAACCATCTTAATGAACTTCCTGTACCTGCTGGGAGA 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTGGCCCAGGAGCCAGAATCATCTTCTTTGGGTCTACAACCATCTTAATGAACTTCCTGTACCTGCTGGGAGA 814
Query 645 AGTTCTGAACAACTATATCTGGGATACACAGAAAA----------------------------GTATGGAAGAA 690
||||||||||||||||||||||||||||||||||| .|||..|||..
Sbjct 815 AGTTCTGAACAACTATATCTGGGATACACAGAAAAAGCCTCCATCTTGGCAAGGCACGTAATCTTATCCAAGCT 888
Query 691 GAGAAAGA-------AAAGCCT----------------AAATTGGAA--------------------------- 714
|.|.||.| ||||..| ||||||.||
Sbjct 889 GTGCAAAACCTGTCCAAAGTGTATGTACAATAACATAAAAATTGAAAGGTGGAAAAAGCGCCAGCACAGACATG 962
Query 715 -------------------------------------------------------------------------- 714
Sbjct 963 TAGTGATTGAGTCCTGCATGAAAATACATCCAAAGGCAAGATGGTTTGGAGATTTTAGGAAGCCCTGGCTCTTT 1036
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1037 CCTCTGACACAATCACAGCATTCTAGACATCCCCAGTAAATGGACTCTGTGACACAGACATTGAGCACCCTGCT 1110
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1111 TTGTGCCAGACACCCTGCCAGGAGCTCAATGGAATCAGACAAATAACGCACAGTATGGAAGAAGAGAAAGAAAA 1184
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1185 GCCTAAATTGGAATGAGATCCAAGTCTAAACGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCG 1258
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1259 GGCATTGGCAGTGGGGGAGAAAAGGCTTCAAAGGAACTTGGTGGCATCAGCACCCCCCTCCCCCAATGAGGACA 1332
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1333 CCTTTTATATATAAATATGTATAAACATAGAATACAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAA 1406
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1407 GAATTCTTCCCAAAGTCATTACTGATAATAACATTTTTTCCTTTTCTAGTTTTAAAACCAGAATTGGACCTTGG 1480
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1481 ATTTTTATTTTGGCAATTGTAACTCCATCTAATCAAGAAAGAATAAAAGTTTATTGCACTTCTTTTTGAGAAAT 1554
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1555 ATGTTAAAGTCAAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAA 1628
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1629 CCTAGGCCACCATGGGGACCTGAGAGGGAAGGGGACAGATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAA 1702
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1703 TGAGCACCATTTGTAATAATGATGTCAATTTCATGAAAAGCCTGAGTGTATTGCATCTCTTGATTTAATCATGT 1776
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1777 GAAACTTTTCCTAGATGCAAATGCTGACTAATAAAGACAAAGCCACCCTGAACCTGACGTCTGCATTGTGCATC 1850
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1851 TCAAAATCCTAACAGCATTAGTATCTCCTTTTCATTTTTATTACCTGTTGAAAATGGGTTTACTGAACCTGGTT 1924
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1925 CTTTCCTATAATTTTTGGATTTTAAAAAATGTGAATCTTTTTGATAACTCCAAAACAAATTTTTTTTTTCTTTT 1998
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1999 TTTCCAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGATCTCAGCTCACGGCAAGCTCCGC 2072
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2073 TTCCCGGGTTCATGCCATTCTCCTGCCTTCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACACGCC 2146
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2147 CGGCTTATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCT 2220
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2221 TGTGATCCACACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGACATGAACCACCGCGCCCAGCCACAAAATTG 2294
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2295 TTTTTAAAAAAACTATTTTACAAAATCTTTGACCGTAATTATTTTTAAGATGAAAAATATGTTATATAAATTAT 2368
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2369 AAAATGTTACTTAACACAAATATAAGTATTGATTGCCCAATGTTGAGAGAGATCAACAAATGATATAAAACCAT 2442
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2443 TCACTCCAAAATTATAATTACATTTTAAAATTAAAAAATGAAAAGCATTAAACTTTTTAATTTGAAAAAAATTT 2516
Query 715 ------------------------------------------------------------------ 714
Sbjct 2517 AAACTCAAAAAGTTAATTTAAAATTAGTTACATTTAAATGTAATTAAATGCTAAAAATCTCTCTTC 2582
