Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03449
• Subject: XM_006522190.1
• Aligned Length: 1326
• Identities: 906
• Gaps: 333

Alignment

Query    1  ATGCTGGCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCGTGCCTATG-ATTGTACCG-------GCAGCTCCT  66
                                                         ||| |||||   |       ||||||   
Sbjct    1  ---------------------------------------------ATGAATTGT---GAAAGAGAGCAGCT---  23

Query   67  TACCTTCCTGGACTGATTCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTC  140
                      ||       .|||||||||||||||||||||.||||||||||||||||||||||||||.||.||
Sbjct   24  ----------GA-------GGGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATGCCTC  80

Query  141  GGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGT  214
            .||.|||||.||.||.||.|||||.||.|||||.||.||||||||||||||||||||.||.|||||||||||||
Sbjct   81  AGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAGT  154

Query  215  ACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGC  288
            ||||.|||||||||||.||.||.||.|||||||||||||||||.|||||..|.|||||||||||.|||||||| 
Sbjct  155  ACACCGGCCAGACCACTGTCCCTGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAG-  227

Query  289  CCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCA  362
              .||.|||||.||.||.|||||||||||.|||||||||||||||||||||||.|||||.|||||.||.|||||
Sbjct  228  --TGCTGACACCAGTGCGCAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCCCCGACCGACGGCCA  299

Query  363  GCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCT  436
            |||||||||||||||||||||||||||.||||.||||||.||||||||||||||||||||.|||||.|||||.|
Sbjct  300  GCCCCAGACACAACCTTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATCCCTT  373

Query  437  TCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTT  510
            ||.|||||||||||||.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  374  TCCGGTTCCGGGATCCAGACCTCCGACAAATGTTTGGTCAATTTGGTAAAATATTAGATGTTGAAATTATTTTT  447

Query  511  AATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAA  584
            ||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  448  AATGAGCGAGGCTCCAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGGAGAA  521

Query  585  ATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAA  658
            |||.|||||.|||||||||||||||||||||||||||||.||||||||.||||||||.||.|||||||||||.|
Sbjct  522  ATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAGA  595

Query  659  AGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTAT  732
            ||||.||||||||.||.||.|||                                                   
Sbjct  596  AGACTGTCAACCCCTACACCAAT---------------------------------------------------  618

Query  733  GCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATA  806
               ||||||||.|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  619  ---GGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATA  689

Query  807  TACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAG  880
            |||||||||||||||.||||||||.|||||.||.|||||.||.||.||.||.|||||||||||.|||||.||||
Sbjct  690  TACTTCTGCAATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAG  763

Query  881  GCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTA  954
            ||||.|||||||||||||||||||||||||||||.||.||||||||||||||.|||||||||||.|||||.||.
Sbjct  764  GCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGTGTT  837

Query  955  GTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCTAC  1017
            ||.||.||.||   ||   |.|||||           |||||        ||||||||||||||.||||||||.
Sbjct  838  GTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCGTACCGCTAT  897

Query 1018  GCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAAT  1091
            ||||||||.|||||||||||||||||||||||||||||                                    
Sbjct  898  GCCCAGCCCACCCCTGCCACTGCCGCTGCCTACAGTGA------------------------------------  935

Query 1092  TTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCC  1165
                             ||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  936  -----------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACACTTGCTCCAGCCCC  992

Query 1166  CACCTACGGCGTTGGTGCCA------------------------------------------------------  1185
            ||||||||||||||||||||                                                      
Sbjct  993  CACCTACGGCGTTGGTGCCATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATG  1066

Query 1186  --------------------------------------------------------------------  1185
                                                                                
Sbjct 1067  TGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATAT  1134