Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03449
• Subject: XM_017023322.2
• Aligned Length: 1411
• Identities: 1130
• Gaps: 260

Alignment

Query    1  -----ATGCTGGCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCGTG--------CCT--ATGATTGTACC--G  57
                 ||..||||..||.|          .||||       |.||||        |||  |.||   ||.|  .
Sbjct    1  ATGAAATCTTGGCAGCTAA----------TTGCA-------GTCGTGGGAGATGCCCTTCAGGA---TATCAAA  54

Query   58  GCAG-CT-CCTTACCTTCCTG---------GACTGA-----TTCA-----------------------------  86
            |||| || |..|||||.|.||         |||.||     ||||                             
Sbjct   55  GCAGACTGCAATACCTGCGTGGAAATAGAAGACAGAAAGGTTTCAAGACAACAGATGAATTGTGAAAGAGAGCA  128

Query   87  ------GGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGCCCAGTTTGCTC  154
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  129  GCTAAGGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGCCCAGTTTGCTC  202

Query  155  CCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACACAGGCCAGACC  228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  203  CCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACACAGGCCAGACC  276

Query  229  ACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCGGCGGACACGAG  302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  277  ACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCGGCGGACACGAG  350

Query  303  CGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCCCCAGACACAAC  376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  351  CGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCCCCAGACACAAC  424

Query  377  CTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCAGGTTCCGGGAT  450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  425  CTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCAGGTTCCGGGAT  498

Query  451  CCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCGAGGCTC  524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  499  CCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCGAGGCTC  572

Query  525  AAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATTACACGGCACCG  598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  573  AAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATTACACGGCACCG  646

Query  599  TGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGACCGTCAACCCT  672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  647  TGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGACCGTCAACCCT  720

Query  673  TATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCAGGCACGGTCCT  746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  721  TATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCAGGCACGGTCCT  794

Query  747  GTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATACTTCTGCAATGC  820
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  795  GTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATACTTCTGCAATGC  868

Query  821  CAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCCGCGGTCGCACC  894
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  869  CAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCCGCGGTCGCACC  942

Query  895  GTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTAGTGTATCAAGAGCC  968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||.||   
Sbjct  943  GTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGTGTTGTTTACCAGGA---  1013

Query  969  TG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCTACGCCCAGCCTACCCC  1031
            ||   |.|||||           |||||        ||||||||||||||||||||||||||||||||||||||
Sbjct 1014  TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCATACCGCTACGCCCAGCCTACCCC  1076

Query 1032  TGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTAACACCT  1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077  TGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTAACACCT  1150

Query 1106  CTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCACCTACGGCGTTG  1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151  CTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCACCTACGGCGTTG  1224

Query 1180  GTGCCA--------------------------------------------------------------------  1185
            ||||||                                                                    
Sbjct 1225  GTGCCATGCCCCAAGGTTCCAGCCCCAGCACAGACTTCAGAGGAGCTAAGCTGCACACTTCCAGGCCTCTGCTG  1298

Query 1186  --------------------------------------------------------------------------  1185
                                                                                      
Sbjct 1299  TCAGGCAGCTGAGAATCTGACTGCCTCTCCTCCCCTATTACAATTCATGTTTAAAGTCATAGTCGCCCAGGAAA  1372

Query 1186  -----  1185
                 
Sbjct 1373  GAAAA  1377