Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03449
- Subject:
- XM_017023334.1
- Aligned Length:
- 1341
- Identities:
- 1003
- Gaps:
- 312
Alignment
Query 1 ---ATGCTG--GCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCG-TGCCTA---TG---AT-TGTACCGGCAG 61
||||.| .|.|||.|.||.|..|.||||| .||||| |.||.| || || |||.|| |||
Sbjct 1 ATGATGCAGCATCCTCTGACGGGGGCCACCTGC------GTGGCGCTCCCCAACGTGGGCATGTGTCCC--CAG 66
Query 62 CT--------CCTT-ACCTTCCTGGACTGA-TTCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGC 125
|| |||| ||.||..||.|||.| ..|||||||||||||||||||||||||||||||||||||||||
Sbjct 67 CTTTCGTGTGCCTTGACTTTTATGTACTTACAGCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGC 140
Query 126 TCAGCCTTACGCTTCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCC 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 TCAGCCTTACGCTTCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCC 214
Query 200 ACCCCGCGCCAGAGTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACG 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 ACCCCGCGCCAGAGTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACG 288
Query 274 CACTCCGAGCAGAGCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGC 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 289 CACTCCGAGCAGAGCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGC 362
Query 348 ACCGACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATG 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 ACCGACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATG 436
Query 422 TCTCCAATATCCCCTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGAT 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 TCTCCAATATCCCCTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGAT 510
Query 496 GTTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGA 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 511 GTTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGA 584
Query 570 CAGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTG 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 585 CAGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTG 658
Query 644 TAATGACAAATAAAAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTAC 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 TAATGACAAATAAAAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTAC 732
Query 718 AGTCCCGAATTCTATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCC 791
|||||||||||||||||||
Sbjct 733 AGTCCCGAATTCTATGCAG------------------------------------------------------- 751
Query 792 CAGTTCACTTGTATATACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAG 865
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 --------------------------TGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAG 799
Query 866 GGGCGCACCTGCGAGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 800 GGGCGCACCTGCGAGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCG 873
Query 940 GCCTACGGCGGAGTAGTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTAT 1002
|||||||||||.||.||.||.||.|| || |.||||| ||||| |||||||||
Sbjct 874 GCCTACGGCGGTGTTGTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTAT 933
Query 1003 GCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGT 1076
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 934 GCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGA--------------------- 986
Query 1077 TGCAGCAGATGAAATTTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGC 1150
||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 --------------------------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGC 1028
Query 1151 ACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCA--------------------------------------- 1185
|||||||||||||||||||||||||||||||||||
Sbjct 1029 ACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCACCTTTGACTGATGCCAAGACTAGGA 1102
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1103 GCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTT 1176
Query 1186 --------- 1185
Sbjct 1177 GCTCCATAC 1185