Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03477
- Subject:
- XR_926265.2
- Aligned Length:
- 3785
- Identities:
- 1737
- Gaps:
- 2048
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATAAACGTGGCGGGACGTATGTGTCATGGCGCTCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGGCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGACTCATCTTTCAAGAGGACTTTAGACTAAT 148
Query 1 -------------------ATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTC 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGCAGATAATTAAGAGAATATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTC 222
Query 56 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 296
Query 130 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 370
Query 204 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 444
Query 278 AAATTACAGAAAATGCATCCGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGAC 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAATTACAGAAAATGCATCCGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGAC 518
Query 352 CACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGC 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGC 592
Query 426 CCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTG 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTG 666
Query 500 TGGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGA 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGA 740
Query 574 GCACGATTGGATTTGCCGAAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAA 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCACGATTGGATTTGCCGAAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAA 814
Query 648 TGCTTGTACCTACTGCAAAACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATA 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCTTGTACCTACTGCAAAACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATA 888
Query 722 GAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGA 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGA 962
Query 796 GATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCT 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCT 1036
Query 870 TGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCT 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCT 1110
Query 944 ACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTG 1184
Query 1018 GCTGACTTCAAAAGAGTAGTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTG 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCTGACTTCAAAAGAGTAGTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTG 1258
Query 1092 TGGTTTTCCTGGAGAAACAGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCC 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGTTTTCCTGGAGAAACAGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCC 1332
Query 1166 TGTTTATTAACCAATTTTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAA 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGTTTATTAACCAATTTTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAA 1406
Query 1240 AAGCAAAGGACAAAAGATCTTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACA 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAGCAAAGGACAAAAGATCTTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACA 1480
Query 1314 ACAAGTGTTAGTAACAGAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGC------ 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACAAGTGTTAGTAACAGAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGATAA 1554
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1555 GAGGTGAAAATGTTTGCTATGGATCATGGCTGGAATTAGAGCTTGAGAAGATGCTGAAGGCCAAGGTGGACAAG 1628
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1629 TCGGATGAGGGATGGGCAGAGGAAGCAGGCTGCCTGTGTCAGAAGGCAGGAAAGCAGGAGCTGAAGAGGCCCCC 1702
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1703 AGCATTGACATTCCCCAGGGAATCATCTCAGACTGGGCAGTGCGTCCCCAGGAAACAGGGGAGCTTTTCAAAGC 1776
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1777 CCAGACTAAACGTGCTCTGTTCAGTACCGGTGGAGACTGCAGTTGAGGAAGGGCTCCCAGCACTCCATGTCTGG 1850
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1851 CCTGCATCGCTTCCCCATTTCCCCATCTCATTAATATACCCCAGAGGGCCATTTTCCTATTCAGGCCAACCTTC 1924
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1925 TGCTCAGCCCTGGGGAGGAGCTTGATTGCATTTTGGTTGCCTCTTCTCTCTCCTTTCTCTTGCCATCTGGGTTT 1998
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1999 TGCCTCAGCAGGGAACTTTTTTCCCTTCATTTTAAAGGCAGTGGCATGCCTCGTTAGCTGCTTCCTCCAATTTA 2072
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2073 AAGCAGTCGGGCTTTTTCCAATTATTAAAACTGGAGGAGGGGAAAACACTGAGCCCTTCATTCAGATCAAGGCA 2146
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2147 GCAGATCAAGGAGGGTTATTTTTCCCCAGAATAGTACCAAATCTCCCAGGGTTAGTTTGGTCTAGAGATTTTCT 2220
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2221 TATTTTATAAAAACTGATTTAAATGGGCTTTTTATATCCTAACACTAAAGCTCTTTTAGTTCTTTTTGCCTGCC 2294
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2295 CTAAGTAATTCACCACCCAGGTGACCTTTTTCTTCTACTTTGATGAAGCAGTGTACTCAGTGGTCATAAAAATC 2368
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2369 AAACTCAGACCAAGATTCAATTTTGCCTTTCAGAGAGATTGGCTGTGGAACTCCTGGCTCTCATCTGACTTTTC 2442
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2443 TGTCTCTATAACTAAGCATATCAAAGATTTTCTAGGAATTATTTTTCTAAATAAGATGAGTTCCAGAGATGAAG 2516
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2517 ATTGTATCTAGATATCCAAGTATTACTGGATTAGAACTGGTCTATTTATTTTGGATTCTAACTTGAAAAGACTG 2590
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2591 GCAAGTCGCTGCAGTGCTAAAATAGAAGTGTAAGGGAGACATCACACACACAAGCTACCTGTGGGTCCCAAAGG 2664
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2665 AAGGGAAACGTTTGCTTGAAGTAAACAAGTACTTTTATCAGGAATCTCTAGTGGAAAGAGACCACCTGACAGTT 2738
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2739 TCCTGTGAACAAGCCAAAGTACCCTTCAGAGGACTGGTTCTAGATGGAGGTAGATTCCCAGGACTGACAAACAC 2812
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2813 ATGCCTTTTCTAACAGAGCAAGGGAAATGAACGGCAGCTGTTAGTTTCAGGAGTCATTTAGCTCCAAACAGCAG 2886
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2887 TGTACAGTGTTATTGGAAGGTTCTTTTAAATGTACCTCCTTCTCCCTCAAAACACAGCACACACATGCACGGAC 2960
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2961 ACAAACACGCAGGCCTGTTTGAAGTGTCTTTTCAAACCATTACTCTGACAGCTCACTTGGAAAGTATTAAAAGT 3034
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3035 ATAAGGCTTTCATCAGTATTGTCTCGGTTTTCCTCATTGCATGGAATAGCCAAAAGCAAGATATCAAAGGCCTG 3108
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3109 TCCAGAAGTGGCTGGCTGATTGCTGGGGGATTTCCCAGGTCTGCCTTCCACGTGCCTCAGGACATCAGGCACAT 3182
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3183 CCTGCACTGGAAAAGCACTGCCCAGGGGCCCAGGAGCCCCTCCCAGGAGTGCCTTTCCTTCCTGCAGGCTCTGC 3256
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3257 AGACCCTTGAGCAGCTAGAAGATAGAGTCCACTTTGTAGGGGATCCCAGAACAGAAAAATGACATTGAGGGACA 3330
Query 1382 --------------------AGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACA 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 ATGAGGAAACCTGGATAATTAGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACA 3404
Query 1436 TCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGC 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGC 3478
Query 1510 AAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTC 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 AAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTC 3552
Query 1584 AGGATCCCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTAC 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 AGGATCCCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTAC 3626
Query 1658 ATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTC 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 ATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTC 3700
Query 1732 TATAAT-------------------------------------------------------------------- 1737
||||||
Sbjct 3701 TATAATTAGAATACAACTAATGGAAACATCTATAAAGAAGAATACATTTCTAATTAAAATCTTCAATGAACAGG 3774
Query 1738 ----------- 1737
Sbjct 3775 AAAGCGACATC 3785
