Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03660
- Subject:
- NM_001288992.3
- Aligned Length:
- 1974
- Identities:
- 1098
- Gaps:
- 876
Alignment
Query 1 ATGGGTGGGCACCTGTCCCCATGGCCCACATACACCAGTGGCCAGACCATTTTGCAAAATCGAAAACCCTGTTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATGACTACCGGAAGCGAGTAGGGAGCTGCCAGCAGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CAGCCTTACAGAGAGATCTTTGAGTTCTTCATAGAGGACTTCAAAACGTACAAGCCATTACTATCCTCCATCAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGGAGCCCCTGAAGGCCAAGCTTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAGAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GACCAAACTGAGGAAGAACTTGGCTGAGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCTGTAAGATCCTCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTGGGGGGAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GACCCTGTGAAGTTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CATGAAGGCCAACTTTGGAGATGTGGTCCCCAGGAGGGACTTTGAAATGCAGGAGAAGACCAACAAGGATCTTC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AGGAGCAGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCAC 888
||||||||||||
Sbjct 1 --------------------------------------------------------------ATGCAGCTGCAC 12
Query 889 ATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13 ATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCC 86
Query 963 TGACTGGACCAAGTGCAAAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 TGACTGGACCAAGTGCAAAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACA 160
Query 1037 GCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 GCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGT 234
Query 1111 CTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 CTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAA 308
Query 1185 GGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCAGAAAGAGACGTTCCCAGATT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCAGAAAGAGACGTTCCCAGATT 382
Query 1259 TCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTGGGCTTATACTATTTTTGAAAAT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 TCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTGGGCTTATACTATTTTTGAAAAT 456
Query 1333 ATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAGCGGAGTGAGAATGT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 ATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAGCGGAGTGAGAATGT 530
Query 1407 GTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 GTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGC 604
Query 1481 TACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 605 TACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG 678
Query 1555 CTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAACTACCGCTCACTGTTTATGGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 CTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAACTACCGCTCACTGTTTATGGA 752
Query 1629 GGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGAGTACT 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 753 GGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGAGTACT 826
Query 1703 TACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 827 TACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTG 900
Query 1777 ATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTC 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 ATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTC 974
Query 1851 GGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTC 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 GGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTC 1048
Query 1925 AGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGC 1974
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049 AGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGC 1098