Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03737
• Subject: NR_045418.2
• Aligned Length: 1493
• Identities: 549
• Gaps: 944

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCGTTGCGCGCATGCGCCTTGACGAGTGAGCCGGGTGAGGGGGCTCCCTAAGTAGCGGAAGGGGTAGATGAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGGAAGGGGCGGGCGCGCTAGGCCTAGTCCTGGCTGGGCTCCCGCTGGAGTGTGCGTTGGGGGCGGACCAGGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGTGGTCTCCAGGGAGGTCGAGGCTGGGGCTCCCACCCGGATTTGGAGCAGGGTCGCCGCGGCCCAGCTGAC  222

Query    1  ---------------------------------------ATGGACAACTGTTTGGCGGCCGCAGCGCTGAATGG  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  223  CCGCCGGCGTTTGTACGTTGTGTGCCCACTCAGGGAGCCATGGACAACTGTTTGGCGGCCGCAGCGCTGAATGG  296

Query   36  GGTGGACCGACGTTCCCTGCAGCGTTCAGCAAGGCTGGCTCTAGAAGTGCTGGAGAGGGCCAAGAGGAGGGCGG  109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGTGGACCGACGTTCCCTGCAGCGTTCAGCAAGGCTGGCTCTAGAAGTGCTGGAGAGGGCCAAGAGGAGGGCGG  370

Query  110  TGGACTGGCATGCCCTGGAGCGTCCCAAAGGCTGCATGGGGGTCCTTGCCCGGGAGGCGCCCCACCTAGAGAAA  183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGACTGGCATGCCCTGGAGCGTCCCAAAGGCTGCATGGGGGTCCTTGCCCGGGAGGCGCCCCACCTAGAGAAA  444

Query  184  CAGCCGGCAGCCGGCCCGCAGCGCGTTCTCCCGGGAGAGAGAGAAGAGAGACCCCCAACCCTTAGTGCTTCCTT  257
            ||||||||||||||||||||||||||||||||||||||                                    
Sbjct  445  CAGCCGGCAGCCGGCCCGCAGCGCGTTCTCCCGGGAGA------------------------------------  482

Query  258  CAGAACAATGGCTGAATTCATGGACTATACTTCAAGTCAGTGTGGGAAATATTATTCATCTGTGCCAGAGGAAG  331
                                                         |||||||||||||||||||||||||||||
Sbjct  483  ---------------------------------------------GAAATATTATTCATCTGTGCCAGAGGAAG  511

Query  332  GAGGGGCAACCCATGTCTATCGTTATCACAGAGGCGAGTCGAAGCTGCACATGTGCTTGGACATAGGGAATGGT  405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  512  GAGGGGCAACCCATGTCTATCGTTATCACAGAGGCGAGTCGAAGCTGCACATGTGCTTGGACATAGGGAATGGT  585

Query  406  CAGAGAAAAGACAGAAAAAAGACATCCCTTGGTCCTGGAGGCAGCTATCAAATATCAGAGCATGCTCCAGAGGC  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  586  CAGAGAAAAGACAGAAAAAAGACATCCCTTGGTCCTGGAGGCAGCTATCAAATATCAGAGCATGCTCCAGAGGC  659

Query  480  ATCCCAGCCTGCTGAGAACATCTCTAAGGACCTCTACATAGAAGTATATCCAGGGACCTATTCTGTCACTGTGG  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  660  ATCCCAGCCTGCTGAGAACATCTCTAAGGACCTCTACATAGAAGTATATCCAGGGACCTATTCTGTCACTGTGG  733

Query  554  GCTCAAATGACTTAACCAAGAAGACTCATGTGGTAGCAGTTGATTCTGGACAAAGCGTGGACCTGGTCTTCCCT  627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  734  GCTCAAATGACTTAACCAAGAAGACTCATGTGGTAGCAGTTGATTCTGGACAAAGCGTGGACCTGGTCTTCCCT  807

Query  628  GTG-----------------------------------------------------------------------  630
            |||                                                                       
Sbjct  808  GTGTGATGTTGACCATCACTGCCATCACATCACCTTTTTTTAAGTAGTAAGAATAAAGCCACTGTATGATTCTC  881

Query  631  --------------------------------------------------------------------------  630
                                                                                      
Sbjct  882  TTAATAGCTATACATTAATCCTGTTTTTAGTGCTGACTGGGTCAGCCTTCCGGGAACTGGAGTCTGTCTCTTTC  955

Query  631  --------------------------------------------------------------------------  630
                                                                                      
Sbjct  956  AGTGCTTTTTTGTTTGTTTGGTTGGTTTTTTTTTGAGACAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGG  1029

Query  631  --------------------------------------------------------------------------  630
                                                                                      
Sbjct 1030  CGTGATCTCGGCTCACTGCAAGTTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTG  1103

Query  631  --------------------------------------------------------------------------  630
                                                                                      
Sbjct 1104  GCACTACAGGCACCCGCCACCATGCCCGGCTATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTG  1177

Query  631  --------------------------------------------------------------------------  630
                                                                                      
Sbjct 1178  GCCAGGATGGTCTCGATCTCTTGACCTCGTGATCCACCCACCTTGGCCTCCCAAAGTGTTGGGATTACAGGCGT  1251

Query  631  --------------------------------------------------------------------------  630
                                                                                      
Sbjct 1252  GAGCCACCGCGCCCGGCCTCAGTGCCTTTTTTAACTTGAGGGTGTAGAGGTCCTCCACGCTTGTTTGCCTGAAA  1325

Query  631  --------------------------------------------------------------------------  630
                                                                                      
Sbjct 1326  GTAATATAATGATGCTGTCTGAACAGGTTTTACTGCTTGCTTTCCAAGTAAAGGTTAATTATGATAATAAAGAG  1399

Query  631  -------------  630
                         
Sbjct 1400  ATTTGGAAATGAA  1412