Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03802
- Subject:
- NR_027714.1
- Aligned Length:
- 1682
- Identities:
- 609
- Gaps:
- 982
Alignment
Query 1 ATGGCAGGCTCCCTGCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGAGCCCCAGTTCATTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GAGTGTTGAGGGGAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGTGGCCGATACGACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ATATCTTCGAGCTGAACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAG 370
||||||.||||||.|||||||.||||||.|.||
Sbjct 1 -----------------------------------------CAGAACTTCCACTGAATACACTAGAAAATACAG 33
Query 371 AGTA-TCTTGCAGAAATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGC 443
|..| |.|||||||||||||||||||||.||||||.|||||||||.||||||||||||||||||..||.||.||
Sbjct 34 AACATTTTTGCAGAAATTATGTTTGAATTATTTAATGTACCAGGATTCTACATTGCAGTTCAGGAGGTACTAGC 107
Query 444 CTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATG 517
|||||..|.||||||||||||||.|||||||||||||..||.|||||.|.|.|||||||||||||..|||||||
Sbjct 108 CTTGGAAGTATCTTGGACATCTCAACAAGTGGGTGAATATATGTTAATGAGTATAGTCATTGACAAAGGAGATG 181
Query 518 GAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGT 591
|||||||||.||||.|||||||.|.||||||||||||||||||.|||||||||||.|||||||.|||||.||||
Sbjct 182 GAGTCACCCTTGTTCTCCCAGTTGTAGAAGGTTATGTAATTGGGAGCTGCATCAATCACATCCTGATTGTAGGT 255
Query 592 AGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGA 665
||||.|..|||||||||||||||.||||||||||||||||||||.||||||||||.|||||||||||||||
Sbjct 256 ---GATACTGTGTATTTCATTCAACAACTGCTAAGGGAGAGGGAGGTAGGAATCCCTCTTGAGCAGTCACTGGA 326
Query 666 GACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATG 739
||||.||||||.||||||||||||||||||||||||||||||.|||||||||||.||||||||.||||||||||
Sbjct 327 GACCACAAAAGTCATTAAGGAGAAATACTGTTACATTTGCCCTGATATAGTCAAAGAATTTGCTAAGTATGATG 400
Query 740 TGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTT 813
||||||||.||||||||||.|||||||||||.||||||||||.||||||||||.|||||||..|.|||.|||||
Sbjct 401 TGGATCCCTGGAAGTGGATGAAACAGTACACAGGTATCAATGTGATCAACCAGGAGAAGTTCATAATAAACGTT 474
Query 814 GGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCAT 887
||||||.||||.||||||..||||||||||||.|||.||||.||||||||||||||||||||||||||.|||||
Sbjct 475 GGTTACAAAAGGTTCCTGCAACCTGAAATATTTTTTTACCCAGAGTTTGCCAACCCAGACTTTATGGAATCCAT 548
Query 888 CTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAG---------- 951
||...|||||||||||| ||||||.|||||.||||..||||||....|.||.|||||||||
Sbjct 549 CTTGAATGTTGTTGATG----AATACAAAACTGTCCCACTGATGTGTATTGTCCACTGTATAAGAATGTTGTTC 618
Query 952 -------------------------------------------------------------------------- 951
Sbjct 619 TTTCAAGGGGTTTGACCATATTCAGGTATTTGAATCTCAACTACAGAGAGATTTGAAGAGTGGTACATGCCAGA 692
Query 952 -------------------------------------------------------------------------- 951
Sbjct 693 TTAAAACTCAGTAAGGAGCTCAGTGGCAGGAGAATCAAACCTAAGCTTACAGAGGTTCGGGTGGTAATCCATCA 766
Query 952 -------------------------------------------------CCCGAGTTCTTTCAGGTCTGCCACA 976
|..|||||.|||||||||||.||||
Sbjct 767 CATGCAGCACTATGCCTTATGGTTTGGAAGCTTAATGCTAGCCTCAACTCTGGAGTTATTTCAGGTCTGTCACA 840
Query 977 CCAAGAAGGACTATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCC------ 1044
||||||||||||||.||||.||.||.|||||||||||||.|||.||||...||||||||||.|||||.
Sbjct 841 CCAAGAAGGACTATAAAGAATATGGTCCCAGCATCTGCCACCAGAACCTTCTCTTTGGAGTAATGTCTTAGTGT 914
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 915 CTGCCTTGAAAGCACCATTTAATAGTGTCATGTTGGGGAACAAGTGTCCTTCAGAACCCAGAGAAGACTACCAT 988
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 989 TTCTAAATGACATTTGGTGTTGATGTCTGAGCAGCATGCTTGCATCACCTAGTGCATGAGGCACAGGGCAGAGT 1062
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1063 CATTTCAGTAAAAGCCATTTCTTTATGTGTTGACTGTTGTATGCCCACTCCTCCTTCTCTCACTCCCTTTCTTC 1136
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1137 ATGCTTCCACAGTTTTCCTCCCCCTTTTCACTTGAACTTTTTTGTTGACAAATACCATTCTGAAGGAATTCAAA 1210
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1211 TGTGACTCTGAAAATTGTTAAGAGGAAAAAAAATTTCAAAAATGGCCCAAAATAGTTCTCCCCCAGGAAAGAAT 1284
Query 1045 ------------------------------------------------------ 1044
Sbjct 1285 GCAGTGGTATAAATCCTTTTCCCCCAGCCTATTTTTATAAATAAAATGTTATAA 1338
