Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03838
- Subject:
- XM_006529399.3
- Aligned Length:
- 2212
- Identities:
- 1311
- Gaps:
- 719
Alignment
Query 1 ATGCTGAGTTTCTTCCGTAGAACACTAGGGCGTCGGTCTATGCGTAAACATGCAGAGAAGGAACGACTCCGAGA 74
||||||||.|||.|..|..||||.||.||.||..||||||||||.||.|||||.||.|||||.||.||||||||
Sbjct 1 ATGCTGAGCTTCCTGAGACGAACGCTTGGCCGCAGGTCTATGCGCAAGCATGCTGAAAAGGAGCGGCTCCGAGA 74
Query 75 AGCACAACGCGCCGCCACACATATTCCTGCAGCTGGAGATTCTAAGTCCATCATCACGTGTCGGGTGTCCCTTC 148
.|||||.||.||.||||||||.||||||||.|||||.|||.|.||||||||||||||.||..||||||||||||
Sbjct 75 GGCACAGCGTGCGGCCACACACATTCCTGCCGCTGGGGATGCCAAGTCCATCATCACATGCAGGGTGTCCCTTC 148
Query 149 TGGATGGTACTGATGTTAGTGTGGACTTGCCAAAAAAAGCCAAAGGACAAGAGTTGTTTGATCAGATTATGTAC 222
||||.|||||.|||||.||||||||||||||.|||||||||||||||||.|||.|||||||.||.||.|||||.
Sbjct 149 TGGACGGTACAGATGTCAGTGTGGACTTGCCGAAAAAAGCCAAAGGACAGGAGCTGTTTGACCAAATCATGTAT 222
Query 223 CACCTGGACCTGATTGAAAGCGACTATTTTGGTCTGAGATTTATGGATTCAGCACAAGTAGCACATTGGTTGGA 296
|||||||||.||||||||||.||||||||||||.|||||||.|||||||||||.||||||||.|||||||||||
Sbjct 223 CACCTGGACTTGATTGAAAGTGACTATTTTGGTTTGAGATTCATGGATTCAGCCCAAGTAGCCCATTGGTTGGA 296
Query 297 TGGTACAAAAAGCATCAAAAAGCAAGTAAAAATTGGTTCACCCTATTGTCTGCATCTTCGAGTTAAGTTTTATT 370
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 297 TGGTACAAAAAGCATCAAAAAGCAAGTAAAAATTGGTTCACCCTATTGTCTTCATCTTCGAGTTAAGTTTTATT 370
Query 371 CCTCAGAACCAAATAACCTTCGTGAGGAGCTAACCCGGTATTTATTTGTTCTTCAGTTAAAACAAGATATTCTC 444
||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 371 CCTCGGAACCAAATAATCTTCGTGAGGAGCTAACCCGGTATTTATTTGTTCTTCAGCTAAAACAAGATATTCTC 444
Query 445 AGTGGAAAATTAGACTGTCCCTTTGATACAGCAGTGCAATTGGCAGCTTATAATCTGCAAGCTGAACTTGGTGA 518
|||||.||.|||||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.||
Sbjct 445 AGTGGGAAGTTAGAGTGTCCCTTTGATACAGCAGTTCAGTTGGCAGCTTATAATCTGCAAGCTGAACTTGGCGA 518
Query 519 CTATGATCTTGCTGAGCATAGTCCTGAACTTGTCTCAGAGTTCAGATTCGTGCCTATTCAGACTGAAGAGATGG 592
|||||||||||||||.||||||||||||||.|||||.||||||||.||.|||||.||.||||||||||||||||
Sbjct 519 CTATGATCTTGCTGAACATAGTCCTGAACTGGTCTCTGAGTTCAGGTTTGTGCCCATCCAGACTGAAGAGATGG 592
Query 593 AACTGGCTATTTTTGAGAAATGGAAGGAATACAGAGGTCAAACACCAGCACAGGCTGAAACCAATTATCTGAAT 666
||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||.||||||
Sbjct 593 AACTGGCTATTTTTGAGAAATGGAAGGAATACAGAGGTCAGACACCAGCACAAGCAGAAACCAATTACCTGAAT 666
Query 667 AAAGCCAAATGGCTAGAAATGTATGGGGTTGATATGCATGTGGTCAAGGCTAGAGATGGGAATGACTATAGTTT 740
||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 667 AAAGCCAAATGGCTAGAAATGTATGGTGTTGATATGCACGTGGTCAAGGCTAGAGATGGCAATGACTATAGTTT 740
Query 741 GGGACTAACACCAACAGGAGTCCTTGTTTTTGAAGGAGATACCAAAATTGGCTTATTTTTTTGGCCGAAGATAA 814
||||||.||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.|||||.|||||||
Sbjct 741 GGGACTGACTCCAACAGGAGTCCTTGTTTTTGAAGGAGAGACCAAAATTGGCTTGTTTTTCTGGCCCAAGATAA 814
Query 815 CCAGATTGGATTTTAAGAAGAATAAATTAACCTTGGTGGTTGTAGAAGATGATGATCAGGGCAAAGAACAGGAA 888
|||||||||||||||||||||||||.|||||..|.||||||||.||||||||||||||||||||||||||.||.
Sbjct 815 CCAGATTGGATTTTAAGAAGAATAAGTTAACTCTAGTGGTTGTGGAAGATGATGATCAGGGCAAAGAACAAGAG 888
Query 889 CATACATTTGTCTTTAGACTGGATCATCCAAAAGCATGCAAACATTTATGGAAATGTGCTGTGGAGCATCATGC 962
|||||.||||||||||||.|||||||.||.|||||.||||||||.|||||||||||||||||||||||.|||||
Sbjct 889 CATACCTTTGTCTTTAGATTGGATCACCCTAAAGCCTGCAAACACTTATGGAAATGTGCTGTGGAGCACCATGC 962
Query 963 TTTCTTCCGCCTTCGAGGCCCCGTCCAAAAGAGTTCTCATCGATCAGGATTTATTCGACTAGGATCACGATTTA 1036
.|||||||||||.|||||.||.||||||||||||||.||||||||||||||.||||||||||||||.|||||||
Sbjct 963 CTTCTTCCGCCTCCGAGGACCTGTCCAAAAGAGTTCCCATCGATCAGGATTCATTCGACTAGGATCCCGATTTA 1036
Query 1037 GATATAGTGGGAAAACAGAGTATCAGACCACAAAAACCAATAAAGCAAGAAGATCAACATCCTTTGAAAGAAGG 1110
||||.|||||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct 1037 GATACAGTGGAAAAACAGAATATCAGACCACAAAAACTAATAAAGCAAGAAGATCAACCTCCTTTGAAAGAAGG 1110
Query 1111 CCCAGCAAACGATATTCTAGACGAACTCTACAAATGAAAGCATGTGCTACAAAACCTGAAGAACTTAGTGTTCA 1184
||.|||||.||.|||||..||||.||.||.|||||||||||..|..|.|||.||||||||||.|||.||||||
Sbjct 1111 CCTAGCAAGCGGTATTCCCGACGGACGCTGCAAATGAAAGCCAGCACAACACAACCTGAAGATCTTGGTGTTC- 1183
Query 1185 CAATAATGTTTCGACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGATGAGATCTGCTCTGCCTGTGAGTCCTT 1258
.|||||.|||..|.||.|..|.||.||||||||||||||||||..|||..|||.||.|||||||.|.|.|||
Sbjct 1184 --TTAATGCTTCCGCTCAGAAAAGTGACTCCCAACAGGCTTGGGGTGTGATGTCTCCTGTGCCTGTCACTTCTT 1255
Query 1259 CCATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGG 1332
||...||||.||...||||||..|||||||||||||||||.|||||||...|||..|||||.|||||.||||||
Sbjct 1256 CCTCATCCTGTGGCGCTGTGCAGGTGGAGATAGAGAATCTCCCACAGACCTCTGCGACAGAGCAGCACGACAGG 1329
Query 1333 AAATGGCTCTCTGCTGCC----AGCG----ACTGCTGTCA---------ACGTGGTGGA---AACCAGTGG--- 1383
|||| ||| |||| |||| ..||| ||| ||.|..|.|| |||||.|||
Sbjct 1330 AAAT-GCT------TGCCCCTAAGCGTTGATTTGC--TCAACAGCCCAGACTTACTAGAAACAACCATTGGTGA 1394
Query 1384 ---AACACAAGG--------GCCTT--GCCCCCACCCCAG-ACCGCACATAGAAACTA----------CAC--- 1430
| |||||| |.||| ||.||...||||| ||| |||.||.| |||
Sbjct 1395 TGTA--ACAAGGACGTCAGAGACTTCGGCACCATTCCCAGCACC------AGATACCATTAATGTTGCCACCAG 1460
Query 1431 ------TGACTTTG-----TTCATGAGCACAATGTG--------AAGAATG---CAG-GAATC-----CGTCAT 1476
|||.||.| |||| .|||..|||||| |||.||| ||| |||.| |..|.|
Sbjct 1461 GTCAAATGAATTAGAGGAATTCA-AAGCTGAATGTGAGACATTAAAGGATGACACAGAGAAGCTTAAACAGCTT 1533
Query 1477 G--------------ATGTT--CATTT-----TCCTGGCCAT--------------ACAGCCA----------- 1504
| ||.|| |||.| .||| .|||| |||||||
Sbjct 1534 GAAACAGAGCAGACTATCTTGCCATCTCTTCGACCT-ACCATTGACATTAATGTCAACAGCCAGGAAGAAGTGG 1606
Query 1505 ------TGACTGAGATA--------------------------------------------------------- 1515
|||||||||.|
Sbjct 1607 TAAAGTTGACTGAGAAATGTCTTAATAATGCCATTGAGAACCCAGCATTGAATGCAGTAAAGGTTCCTCCTGAC 1680
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1681 TTCAAGAGTAATATTTTGAAAGCTCAAGTAGAAGCTGTGCATAAGGTTACAAGAGAAGATAGTTTATTAACTCA 1754
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1755 TAAAAATGCCAGCGTTCAGGATGCTGCCACAAACAGTACTGCATTCAATGAAAATGATGTGCCCGTCTGTAAAG 1828
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1829 ATTCCCTCACTCCGGTGCATGGCACAGCTGCAGACAGTGCCTCTGTACTAAAGGATGCTACTGATGAACTGGAC 1902
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1903 GCCTTACTTCTTTCTCTGACAGAGAATCTGATGGACCACACAGTAACACCTCAGGTGTCTTCACCATCCATGAT 1976
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1977 CACACCCCGGTGGATTATTCCAAGTGCTACCATCTCCAATGGGCTTGCAGGATATGGAGCATCTTTGGCAGGGA 2050
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2051 CAGATGAATGTAGTCAGAAAGATGGATTCTCACTGATTTCCCCCCCAGCACCATTCTTGGTAGATGCTGTGACC 2124
Query 1516 ------------------------------------------------------------------ 1515
Sbjct 2125 AGCTCTGCCCCTCCCTTGCCTGAAGACTCAACCTTGAAGCAGAAGTGCTTGCTGACTACTGAGCTC 2190
