Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03879
• Subject: XM_006533257.3
• Aligned Length: 2151
• Identities: 1232
• Gaps: 723

Alignment

Query    1  ATGGCAGTGTACCGCCTGTGTGTGACCACTGGTCCCTACCTGAGGGCCGGCACACTGGACAACATCTCTGTCAC  74
            ||||||||.||.||.||||||||||||||||||.|||||||||.|||.||||||.||||.|||||||.||..||
Sbjct    1  ATGGCAGTATATCGGCTGTGTGTGACCACTGGTTCCTACCTGAAGGCTGGCACATTGGATAACATCTATGCTAC  74

Query   75  ACTGGTGGGCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTGGATCGG  148
            |.||||.|||||.||||||||||||||.||||||..|||.|||||..|.|||||||||||||||.|||||||||
Sbjct   75  ATTGGTAGGCACCTGTGGTGAAAGCCCTAAGCAGAAGCTGGATCGCGTAGGCAGGGACTTCGCCTCTGGATCGG  148

Query  149  TACAGAAGTACAAGGTGCGTTGCACAGCGGAGCTGGGTGAGCTCTTGCTGCTGCGTGTACACAAGGAGCGCTAC  222
            |.||||||||.||||||||.||...|||.||||||||||||.||||||||.||||..|||||||||||||||..
Sbjct  149  TTCAGAAGTATAAGGTGCGCTGTGAAGCAGAGCTGGGTGAGATCTTGCTGTTGCGCTTACACAAGGAGCGCTTT  222

Query  223  GCTTTCTTCCGCAAGGACTCTTGGTACTGTAGCCGCATCTGTGTCACCGAACCGGATGG---TAGTGTATCCCA  293
            |||||||||.||||||||.||||||||||.||.||.|||||||||||.|..||.|||||   |..|||   |||
Sbjct  223  GCTTTCTTCTGCAAGGACCCTTGGTACTGCAGTCGAATCTGTGTCACTGCCCCCGATGGCTCTGCTGT---CCA  293

Query  294  CTTCCCCTGCTATCAGTGGATTGAAGGCTACTGCACCGTGGAGCTGAGGCCAGGAACAGCAAGAACTATTTGTC  367
            |||.||||||||.||||||||.||.||||||||.||.|||||||||.|||||||||||||||||||.||.||||
Sbjct  294  CTTTCCCTGCTACCAGTGGATCGATGGCTACTGTACTGTGGAGCTGCGGCCAGGAACAGCAAGAACCATCTGTC  367

Query  368  AGGACTCTCTTCCCCTCCTCCTGGATCACAGGACACGGGAGCTCCGGGCCCGACAAGAATGCTACCGCTGGAAG  441
            ||||.||||||||||||||.|||||.|||||||.||||||.||||..|||||.||||||||.||.|||||||||
Sbjct  368  AGGATTCTCTTCCCCTCCTTCTGGACCACAGGAAACGGGAACTCCAAGCCCGCCAAGAATGTTATCGCTGGAAG  441

Query  442  ATCTATGCCCCTGGCTTCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGC  515
            ||||..||||||||||||||..|.|||||.||.||||.||||||||||||||||||||||||.|||||||||||
Sbjct  442  ATCTTCGCCCCTGGCTTCCCTCGGATGGTGGATGTCAGCAGCTTTCAGGAGATGGAGTCAGATAAGAAATTTGC  515

Query  516  CTTGACAAAGACGACAACTTGTGTAGACCAGGGTGACAGCAGTGGGAATCGGTACCTGCCCGGCTTCCCCATGA  589
            ||||||.|||||...|.||||||.|||.||||.|||||.|..||||||.|||||||||||.|||||.||.||||
Sbjct  516  CTTGACCAAGACAGTACCTTGTGCAGAACAGGATGACAACTCTGGGAACCGGTACCTGCCTGGCTTTCCTATGA  589

Query  590  AAATTGACATCCCATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGCTC  663
            |.||||||||||||||.|||.||.|||||||.|||||..|||||||||||||||||||||||..|||.|||.||
Sbjct  590  AGATTGACATCCCATCTCTGCTGCACATGGAACCCAACATTCGATACTCAGCCACCAAGACGGCCTCACTGATC  663

Query  664  TTCAATGCCATCCCTGCGTCCTTGGGAATGAAGCTTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAAGCT  737
            |||||.|||.|.|||||.|||||.||.||||||.|||||||.||..||||.|||||||||||||||||||.|||
Sbjct  664  TTCAACGCCCTTCCTGCATCCTTTGGCATGAAGATTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAGGCT  737

Query  738  GGATGACATGCAGAACATCTTCTGGTGCCATAAGACCTTCACGACAAAGTATGTCACAGAGCACTGGTGTGAAG  811
            |||.|||||.|.||||||||||||||||||||||||||||||..||.||||.|||||.|||||.||||||||.|
Sbjct  738  GGACGACATCCGGAACATCTTCTGGTGCCATAAGACCTTCACTTCAGAGTACGTCACCGAGCATTGGTGTGAGG  811

Query  812  ATCA-CTTCTTTGGGTACCAGTACCTGAATGGTGTCAATCCCGTCATGCTCCACTGCATCTCTAGCTTGCCCAG  884
            | || |||||||||||||||||||||||||||||||||.||.||||||||.||.|||.||||.|||||||||||
Sbjct  812  A-CAGCTTCTTTGGGTACCAGTACCTGAATGGTGTCAACCCTGTCATGCTTCATTGCCTCTCCAGCTTGCCCAG  884

Query  885  CAAGCTGCCTGTCACCAATGACATGGTGGCCCCCTTGCTGGGA-CAGGACACATGCCTGCAGACAGAGCTAGAG  957
            ||||||||||||||||||||||||||||||.||.||||||||| |||| |||.|||||.||.||||||||||||
Sbjct  885  CAAGCTGCCTGTCACCAATGACATGGTGGCACCTTTGCTGGGACCAGG-CACCTGCCTACAAACAGAGCTAGAG  957

Query  958  AGGGGGAACATCTTCCTAGCGGACTACTGGATCCTGGCGGAGGCCCCCACCCACTGCCTAAACGGCCGCCAGCA  1031
            ||||||.||||||||||.|||||||||||||||||||||||||||||...|||.|||.|||||||.|.|||.||
Sbjct  958  AGGGGGCACATCTTCCTGGCGGACTACTGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACA  1031

Query 1032  GTACGTGGCCGCCCCACTGTGCCTGCTGTGGCTCAGCCCCCAGGGGGCGCTGGTGCCCTTGGCCATCCAGCTCA  1105
            ||||||..|.||.||.||.||||||.|||||||||.|||.|||||||.||||.||||.|||||.||||||||||
Sbjct 1032  GTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCTCA  1105

Query 1106  GCCAGACCCCCGGGCCTGACAGCCCCATCTTCCTGCCCACTGACTCCGAATGGGACTGGCTGCTGGCCAAGACG  1179
            |||||||.||.|||||.||.|||||||||||.|||||||||||.|.|||.|.||||||||||||||||||||||
Sbjct 1106  GCCAGACACCAGGGCCAGAGAGCCCCATCTTTCTGCCCACTGATTGCGAGTTGGACTGGCTGCTGGCCAAGACG  1179

Query 1180  TGGGTGCGCAACTCTGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGC  1253
            ||||||||||||||||||||..||||||||||.|||||||||||.||||||||||||||||||||.||||||||
Sbjct 1180  TGGGTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGC  1253

Query 1254  CTTCGCCATGGCCACGCTGCGCCAGCTGCCGCTCTGCCACCCCATCTACAAGCTCCTACTCCCCCACACTCGAT  1327
            ||||.|||||||.||.|||||.||||||||||||||.||.||..|||||||||||||.||.||.||.|||||.|
Sbjct 1254  CTTCTCCATGGCTACACTGCGTCAGCTGCCGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCT  1327

Query 1328  ACACGCTGCAGGTGAACACCATCGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCGTGGACCAGGT-------  1394
            ||||||||||.||||||||||||||.||.|||||||||||||||||.||.||||||||||||.||||       
Sbjct 1328  ACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAACCCAGACGGCCTCGTGGACAAGGTGCAGCCT  1401

Query 1395  ------CACGTCCATCGGGAGGCAAGGCCTCATCTACCTCATGAGCACGGGCCTGGCCCACTTCACCTACACCA  1462
                  ||||.||||        ||||||.|                   |||   ||||..||||.|.||   
Sbjct 1402  CCCCGCCACGACCAT--------AAGGCCCC-------------------GCC---CCCAAGTCACGTCCA---  1442

Query 1463  ATTTCTGCCTTCCGGACAGCCTGCGGGCCCGCGGCGTCCTGGCTATCCCCAACTACCACTACCGAGACGACGGC  1536
               ||.|                                                                   
Sbjct 1443  ---TCGG-------------------------------------------------------------------  1446

Query 1537  CTGAAGATCTGGGCGGCCATTGAGAGCTTTGTCTCAGAAATCGTGGGCTACTATTATCCCAGTGACGCATCTGT  1610
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 1611  GCAGCAGGATTCGGAGCTGCAGGCCTGGACTGGCGAGATTTTTGCTCAGGCGTTCCTGGGCCGGGAAAGCTCAG  1684
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 1685  GTTTCCCAAGCCGGCTGTGCACCCCAGGAGAGATGGTGAAGTTCCTCACTGCAATCATCTTCAATTGCTCTGCC  1758
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 1759  CAGCACGCTGCTGTCAACAGTGGGCAGCATGACTTTGGGGCCTGGATGCCCAATGCTCCATCATCCATGAGGCA  1832
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 1833  GCCCCCACCCCAGACCAAGGGGACCACCACCCTGAAGACTTACCTAGACACCCTCCCTGAAGTGAACATCAGCT  1906
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 1907  GTAACAACCTCCTCCTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCAGAGGCCCCTGGGCACCTACCCAGAT  1980
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 1981  GAGCACTTCACAGAGGAGGCCCCGAGGCGGAGCATCGCCGCCTTCCAGAGCCGCCTGGCCCAGATCTCAAGGGA  2054
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 2055  CATCCAGGAGCGGAACCAGGGTCTGGCACTGCCCTACACCTACCTGGACCCTCCCCTCATTGAGAACAGCGTCT  2128
                                                                                      
Sbjct 1447  --------------------------------------------------------------------------  1446

Query 2129  CCATC  2133
                 
Sbjct 1447  -----  1446